RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 MEGF6O75095 1541 aa18.85■□□□□ 0.61
USF1-206ENST00000491629 PRIM1P49642 420 aaKnown RBP18.85■□□□□ 0.61
USF1-206ENST00000491629 ANKRD36BQ8N2N9 1353 aa18.84■□□□□ 0.61
USF1-206ENST00000491629 CARD11Q9BXL7 1154 aa18.84■□□□□ 0.61
USF1-206ENST00000491629 C5P01031 1676 aa18.83■□□□□ 0.61
USF1-206ENST00000491629 KLHL34Q8N239 644 aa18.83■□□□□ 0.6
USF1-206ENST00000491629 MAP3K19Q56UN5 1328 aa18.82■□□□□ 0.6
USF1-206ENST00000491629 TFCP2L1Q9NZI6 479 aa18.82■□□□□ 0.6
USF1-206ENST00000491629 HOXC9P31274 260 aa18.81■□□□□ 0.6
USF1-206ENST00000491629 SYTL4Q96C24 671 aaPredicted RBP18.81■□□□□ 0.6
USF1-206ENST00000491629 TERF2IPQ9NYB0 399 aa18.81■□□□□ 0.6
USF1-206ENST00000491629 ITGB4P16144 1822 aa18.81■□□□□ 0.6
USF1-206ENST00000491629 YBX3P16989 372 aaKnown RBP eCLIP18.8■□□□□ 0.6
USF1-206ENST00000491629 POLD1P28340 1107 aa18.8■□□□□ 0.6
USF1-206ENST00000491629 PELP1Q8IZL8 1130 aaKnown RBP18.79■□□□□ 0.6
USF1-206ENST00000491629 PUS7Q96PZ0 661 aaKnown RBP18.79■□□□□ 0.6
USF1-206ENST00000491629 TESK2Q96S53 571 aa18.79■□□□□ 0.6
USF1-206ENST00000491629 TOGARAM1Q9Y4F4 1720 aa18.79■□□□□ 0.6
USF1-206ENST00000491629 COL23A1Q86Y22 540 aaPredicted RBP18.78■□□□□ 0.6
USF1-206ENST00000491629 ZCRB1Q8TBF4 217 aaKnown RBP18.78■□□□□ 0.6
USF1-206ENST00000491629 NBPF6Q5VWK0 638 aa18.76■□□□□ 0.59
USF1-206ENST00000491629 NBPF4Q96M43 638 aa18.76■□□□□ 0.59
USF1-206ENST00000491629 CCNL1Q9UK58 526 aaPredicted RBP18.76■□□□□ 0.59
USF1-206ENST00000491629 UBR3Q6ZT12 1888 aa18.75■□□□□ 0.59
USF1-206ENST00000491629 GIGYF1O75420 1035 aaPredicted RBP18.75■□□□□ 0.59
USF1-206ENST00000491629 USHBP1Q8N6Y0 703 aa18.75■□□□□ 0.59
USF1-206ENST00000491629 COG3Q96JB2 828 aa18.74■□□□□ 0.59
USF1-206ENST00000491629 KIF20BQ96Q89 1820 aa18.74■□□□□ 0.59
USF1-206ENST00000491629 AMPHP49418 695 aa18.73■□□□□ 0.59
USF1-206ENST00000491629 RRS1Q15050 365 aaKnown RBP18.73■□□□□ 0.59
USF1-206ENST00000491629 MSL1Q68DK7 614 aa18.73■□□□□ 0.59
USF1-206ENST00000491629 MAP2P11137 1827 aaKnown RBP18.72■□□□□ 0.59
USF1-206ENST00000491629 RTL1A6NKG5 1358 aa18.72■□□□□ 0.59
USF1-206ENST00000491629 ST20-MTHFSA0A0A6YYL1 179 aa18.72■□□□□ 0.59
USF1-206ENST00000491629 C4BP0C0L5 1744 aa18.71■□□□□ 0.59
USF1-206ENST00000491629 USP47Q96K76 1375 aa18.71■□□□□ 0.59
USF1-206ENST00000491629 AMIGO3Q86WK7 504 aa18.71■□□□□ 0.59
USF1-206ENST00000491629 PKD1L3Q7Z443 1732 aa18.71■□□□□ 0.59
USF1-206ENST00000491629 FYB1O15117 783 aa18.7■□□□□ 0.58
USF1-206ENST00000491629 ATP10DQ9P241 1426 aa18.69■□□□□ 0.58
USF1-206ENST00000491629 MSH5O43196 834 aa18.69■□□□□ 0.58
USF1-206ENST00000491629 GRIN3BO60391 1043 aa18.68■□□□□ 0.58
USF1-206ENST00000491629 GGNBP2Q9H3C7 697 aa18.68■□□□□ 0.58
USF1-206ENST00000491629 CGNL1Q0VF96 1302 aa18.67■□□□□ 0.58
USF1-206ENST00000491629 CYP27B1O15528 508 aa18.66■□□□□ 0.58
USF1-206ENST00000491629 HSP90AB2PQ58FF8 381 aa18.66■□□□□ 0.58
USF1-206ENST00000491629 SMIM5Q71RC9 77 aa18.66■□□□□ 0.58
USF1-206ENST00000491629 ADCY9O60503 1353 aa18.66■□□□□ 0.58
USF1-206ENST00000491629 PALLDQ8WX93 1383 aa18.66■□□□□ 0.58
USF1-206ENST00000491629 TONSLQ96HA7 1378 aa18.66■□□□□ 0.58
USF1-206ENST00000491629 ANKRD26Q9UPS8 1709 aa18.65■□□□□ 0.58
USF1-206ENST00000491629 INSRP06213 1382 aa18.65■□□□□ 0.58
USF1-206ENST00000491629 RAPGEF4Q8WZA2 1011 aa18.64■□□□□ 0.57
USF1-206ENST00000491629 CD2APQ9Y5K6 639 aa18.64■□□□□ 0.57
USF1-206ENST00000491629 KIAA1551Q9HCM1 1747 aa18.63■□□□□ 0.57
USF1-206ENST00000491629 TATP17735 454 aaPredicted RBP18.63■□□□□ 0.57
USF1-206ENST00000491629 MPRIPQ6WCQ1 1025 aa18.63■□□□□ 0.57
USF1-206ENST00000491629 PCDH11XQ9BZA7 1347 aa18.63■□□□□ 0.57
USF1-206ENST00000491629 PCDH11YQ9BZA8 1340 aa18.63■□□□□ 0.57
USF1-206ENST00000491629 IFFO2Q5TF58 517 aa18.62■□□□□ 0.57
USF1-206ENST00000491629 NCAPD2Q15021 1401 aa18.62■□□□□ 0.57
USF1-206ENST00000491629 KIF13BQ9NQT8 1826 aa18.61■□□□□ 0.57
USF1-206ENST00000491629 SMG6Q86US8 1419 aaKnown RBP18.61■□□□□ 0.57
USF1-206ENST00000491629 FLT4P35916 1363 aa18.6■□□□□ 0.57
USF1-206ENST00000491629 N4BP2Q86UW6 1770 aaPredicted RBP18.6■□□□□ 0.57
USF1-206ENST00000491629 FLAD1Q8NFF5 587 aa18.59■□□□□ 0.57
USF1-206ENST00000491629 PIGBQ92521 554 aa18.59■□□□□ 0.57
USF1-206ENST00000491629 WWC3Q9ULE0 1092 aa18.58■□□□□ 0.56
USF1-206ENST00000491629 EMILIN1Q9Y6C2 1016 aa18.58■□□□□ 0.56
USF1-206ENST00000491629 KIF24Q5T7B8 1368 aa18.57■□□□□ 0.56
USF1-206ENST00000491629 IGSF1Q8N6C5 1336 aa18.57■□□□□ 0.56
USF1-206ENST00000491629 LINC00116Q8NCU8 138 aa18.57■□□□□ 0.56
USF1-206ENST00000491629 CARD14Q9BXL6 1004 aa18.57■□□□□ 0.56
USF1-206ENST00000491629 CICQ96RK0 1608 aaPredicted RBP18.56■□□□□ 0.56
USF1-206ENST00000491629 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.56■□□□□ 0.56
USF1-206ENST00000491629 PHF14O94880 888 aa18.56■□□□□ 0.56
USF1-206ENST00000491629 NKX1-1Q15270 411 aaPredicted RBP18.56■□□□□ 0.56
USF1-206ENST00000491629 ZNF526Q8TF50 670 aaPredicted RBP18.56■□□□□ 0.56
USF1-206ENST00000491629 GPBP1L1Q9HC44 474 aaPredicted RBP18.56■□□□□ 0.56
USF1-206ENST00000491629 BRCA1P38398 1863 aaKnown RBP18.55■□□□□ 0.56
USF1-206ENST00000491629 AK7Q96M32 723 aa18.55■□□□□ 0.56
USF1-206ENST00000491629 SMARCC1Q92922 1105 aaPredicted RBP18.54■□□□□ 0.56
USF1-206ENST00000491629 SLC24A1O60721 1099 aa18.53■□□□□ 0.56
USF1-206ENST00000491629 COL5A3P25940 1745 aaPredicted RBP18.53■□□□□ 0.56
USF1-206ENST00000491629 TMF1P82094 1093 aa18.53■□□□□ 0.56
USF1-206ENST00000491629 ITPK1Q13572 414 aa18.53■□□□□ 0.56
USF1-206ENST00000491629 MYH14Q7Z406 1995 aaKnown RBP18.53■□□□□ 0.56
USF1-206ENST00000491629 LOC102724428A0A0B4J2F2 783 aa18.52■□□□□ 0.56
USF1-206ENST00000491629 HSPA6P17066 643 aa18.52■□□□□ 0.56
USF1-206ENST00000491629 SIK1P57059 783 aa18.52■□□□□ 0.56
USF1-206ENST00000491629 ASAP1Q9ULH1 1129 aa18.52■□□□□ 0.56
USF1-206ENST00000491629 NSD3Q9BZ95 1437 aa18.51■□□□□ 0.55
USF1-206ENST00000491629 KIF3CO14782 793 aa18.51■□□□□ 0.55
USF1-206ENST00000491629 SSFA2P28290 1259 aa18.51■□□□□ 0.55
USF1-206ENST00000491629 ZNF831Q5JPB2 1677 aa18.5■□□□□ 0.55
USF1-206ENST00000491629 EYA1Q99502 592 aa18.5■□□□□ 0.55
USF1-206ENST00000491629 C4AP0C0L4 1744 aa18.49■□□□□ 0.55
USF1-206ENST00000491629 PXDNLA1KZ92 1463 aa18.49■□□□□ 0.55
USF1-206ENST00000491629 HMGB2P26583 209 aaKnown RBP18.48■□□□□ 0.55
USF1-206ENST00000491629 WASHC2AQ641Q2 1341 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms