RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 INSRP06213 1382 aa25.49■■□□□ 1.67
SMIM4-205ENST00000491607 FLT4P35916 1363 aa25.49■■□□□ 1.67
SMIM4-205ENST00000491607 RAPGEF4Q8WZA2 1011 aa25.48■■□□□ 1.67
SMIM4-205ENST00000491607 PRIM1P49642 420 aaKnown RBP25.47■■□□□ 1.67
SMIM4-205ENST00000491607 ATF5Q9Y2D1 282 aaPredicted RBP25.47■■□□□ 1.67
SMIM4-205ENST00000491607 KIF24Q5T7B8 1368 aa25.46■■□□□ 1.67
SMIM4-205ENST00000491607 EMILIN1Q9Y6C2 1016 aa25.46■■□□□ 1.67
SMIM4-205ENST00000491607 PPM1GO15355 546 aaPredicted RBP25.45■■□□□ 1.66
SMIM4-205ENST00000491607 LRRC4BQ9NT99 713 aa25.45■■□□□ 1.66
SMIM4-205ENST00000491607 DOT1LQ8TEK3 1739 aa25.45■■□□□ 1.66
SMIM4-205ENST00000491607 PAPPAQ13219 1627 aa25.45■■□□□ 1.66
SMIM4-205ENST00000491607 CGNL1Q0VF96 1302 aa25.44■■□□□ 1.66
SMIM4-205ENST00000491607 SHANK3Q9BYB0 1731 aa25.44■■□□□ 1.66
SMIM4-205ENST00000491607 TATP17735 454 aaPredicted RBP25.44■■□□□ 1.66
SMIM4-205ENST00000491607 EIF4G2P78344 907 aaKnown RBP eCLIP25.43■■□□□ 1.66
SMIM4-205ENST00000491607 KAT6BQ8WYB5 2073 aa25.43■■□□□ 1.66
SMIM4-205ENST00000491607 PTGER2P43116 358 aa25.42■■□□□ 1.66
SMIM4-205ENST00000491607 ZNF827Q17R98 1081 aa25.42■■□□□ 1.66
SMIM4-205ENST00000491607 SLC27A3Q5K4L6 730 aa25.42■■□□□ 1.66
SMIM4-205ENST00000491607 MTFR1LQ9H019 292 aa25.42■■□□□ 1.66
SMIM4-205ENST00000491607 DCAF8L1A6NGE4 600 aa25.4■■□□□ 1.66
SMIM4-205ENST00000491607 HSPA5P11021 654 aaKnown RBP25.4■■□□□ 1.66
SMIM4-205ENST00000491607 NSD2O96028 1365 aa25.4■■□□□ 1.66
SMIM4-205ENST00000491607 PCDH11XQ9BZA7 1347 aa25.38■■□□□ 1.65
SMIM4-205ENST00000491607 PCDH11YQ9BZA8 1340 aa25.38■■□□□ 1.65
SMIM4-205ENST00000491607 KCNQ4P56696 695 aa25.38■■□□□ 1.65
SMIM4-205ENST00000491607 AKT1S1Q96B36 256 aa25.36■■□□□ 1.65
SMIM4-205ENST00000491607 TNNT2P45379 298 aaPredicted RBP25.35■■□□□ 1.65
SMIM4-205ENST00000491607 CCNL1Q9UK58 526 aaPredicted RBP25.34■■□□□ 1.65
SMIM4-205ENST00000491607 WASHC2AQ641Q2 1341 aa25.34■■□□□ 1.65
SMIM4-205ENST00000491607 TFCP2L1Q9NZI6 479 aa25.33■■□□□ 1.65
SMIM4-205ENST00000491607 ANKRD26Q9UPS8 1709 aa25.33■■□□□ 1.65
SMIM4-205ENST00000491607 FHDC1Q9C0D6 1143 aaPredicted RBP25.32■■□□□ 1.64
SMIM4-205ENST00000491607 POLKQ9UBT6 870 aa25.32■■□□□ 1.64
SMIM4-205ENST00000491607 LY75O60449 1722 aa25.32■■□□□ 1.64
SMIM4-205ENST00000491607 SGIP1Q9BQI5 828 aa25.31■■□□□ 1.64
SMIM4-205ENST00000491607 PANK3Q9H999 370 aa25.31■■□□□ 1.64
SMIM4-205ENST00000491607 CYP27B1O15528 508 aa25.3■■□□□ 1.64
SMIM4-205ENST00000491607 PNPLA7Q6ZV29 1317 aa25.3■■□□□ 1.64
SMIM4-205ENST00000491607 YY1P25490 414 aa25.29■■□□□ 1.64
SMIM4-205ENST00000491607 MPRIPQ6WCQ1 1025 aa25.29■■□□□ 1.64
SMIM4-205ENST00000491607 ARXQ96QS3 562 aa25.29■■□□□ 1.64
SMIM4-205ENST00000491607 EYA1Q99502 592 aa25.28■■□□□ 1.64
SMIM4-205ENST00000491607 SYT17Q9BSW7 474 aa25.28■■□□□ 1.64
SMIM4-205ENST00000491607 SPG7Q9UQ90 795 aa25.28■■□□□ 1.64
SMIM4-205ENST00000491607 MAP2P11137 1827 aaKnown RBP25.28■■□□□ 1.64
SMIM4-205ENST00000491607 NCAPD2Q15021 1401 aa25.28■■□□□ 1.64
SMIM4-205ENST00000491607 SLC16A10Q8TF71 515 aa25.27■■□□□ 1.64
SMIM4-205ENST00000491607 PKD1L3Q7Z443 1732 aa25.26■■□□□ 1.63
SMIM4-205ENST00000491607 QSER1Q2KHR3 1735 aa25.26■■□□□ 1.63
SMIM4-205ENST00000491607 PALLDQ8WX93 1383 aa25.25■■□□□ 1.63
SMIM4-205ENST00000491607 EIF4A2Q14240 407 aaKnown RBP25.24■■□□□ 1.63
SMIM4-205ENST00000491607 MSH5O43196 834 aa25.23■■□□□ 1.63
SMIM4-205ENST00000491607 POLD1P28340 1107 aa25.23■■□□□ 1.63
SMIM4-205ENST00000491607 TUBGCP6Q96RT7 1819 aa25.23■■□□□ 1.63
SMIM4-205ENST00000491607 TOGARAM1Q9Y4F4 1720 aa25.23■■□□□ 1.63
SMIM4-205ENST00000491607 KLHL34Q8N239 644 aa25.22■■□□□ 1.63
SMIM4-205ENST00000491607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.2■■□□□ 1.62
SMIM4-205ENST00000491607 NKX1-1Q15270 411 aaPredicted RBP25.19■■□□□ 1.62
SMIM4-205ENST00000491607 MORC1Q86VD1 984 aa25.19■■□□□ 1.62
SMIM4-205ENST00000491607 SMARCC1Q92922 1105 aaPredicted RBP25.19■■□□□ 1.62
SMIM4-205ENST00000491607 C5P01031 1676 aa25.19■■□□□ 1.62
SMIM4-205ENST00000491607 PIGBQ92521 554 aa25.18■■□□□ 1.62
SMIM4-205ENST00000491607 KNSTRNQ9Y448 316 aa25.18■■□□□ 1.62
SMIM4-205ENST00000491607 HMGB2P26583 209 aaKnown RBP25.17■■□□□ 1.62
SMIM4-205ENST00000491607 COL23A1Q86Y22 540 aaPredicted RBP25.17■■□□□ 1.62
SMIM4-205ENST00000491607 IFNL2Q8IZJ0 200 aa25.17■■□□□ 1.62
SMIM4-205ENST00000491607 MAP3K5Q99683 1374 aa25.17■■□□□ 1.62
SMIM4-205ENST00000491607 ITGB4P16144 1822 aa25.16■■□□□ 1.62
SMIM4-205ENST00000491607 PHKG2P15735 406 aa25.16■■□□□ 1.62
SMIM4-205ENST00000491607 TMOD3Q9NYL9 352 aa25.16■■□□□ 1.62
SMIM4-205ENST00000491607 IGSF1Q8N6C5 1336 aa25.14■■□□□ 1.62
SMIM4-205ENST00000491607 AK7Q96M32 723 aa25.13■■□□□ 1.61
SMIM4-205ENST00000491607 MSL1Q68DK7 614 aa25.12■■□□□ 1.61
SMIM4-205ENST00000491607 COL24A1Q17RW2 1714 aa25.12■■□□□ 1.61
SMIM4-205ENST00000491607 FLAD1Q8NFF5 587 aa25.11■■□□□ 1.61
SMIM4-205ENST00000491607 KIF7Q2M1P5 1343 aa25.11■■□□□ 1.61
SMIM4-205ENST00000491607 C4BP0C0L5 1744 aa25.1■■□□□ 1.61
SMIM4-205ENST00000491607 TAF1LQ8IZX4 1826 aa25.09■■□□□ 1.61
SMIM4-205ENST00000491607 PLEKHG2Q9H7P9 1386 aa25.09■■□□□ 1.61
SMIM4-205ENST00000491607 UTRNP46939 3433 aa25.09■■□□□ 1.61
SMIM4-205ENST00000491607 LOC102724428A0A0B4J2F2 783 aa25.09■■□□□ 1.61
SMIM4-205ENST00000491607 SIK1P57059 783 aa25.09■■□□□ 1.61
SMIM4-205ENST00000491607 GPR162Q16538 588 aa25.09■■□□□ 1.61
SMIM4-205ENST00000491607 ASAP1Q9ULH1 1129 aa25.09■■□□□ 1.61
SMIM4-205ENST00000491607 PHF14O94880 888 aa25.08■■□□□ 1.61
SMIM4-205ENST00000491607 PLEKHO1Q53GL0 409 aaPredicted RBP25.08■■□□□ 1.61
SMIM4-205ENST00000491607 PELP1Q8IZL8 1130 aaKnown RBP25.08■■□□□ 1.61
SMIM4-205ENST00000491607 AEBP1Q8IUX7 1158 aa25.06■■□□□ 1.6
SMIM4-205ENST00000491607 NLGN2Q8NFZ4 835 aa25.06■■□□□ 1.6
SMIM4-205ENST00000491607 HSP90AB1P08238 724 aaKnown RBP25.05■■□□□ 1.6
SMIM4-205ENST00000491607 ATP6V1AP38606 617 aa25.05■■□□□ 1.6
SMIM4-205ENST00000491607 AMER1Q5JTC6 1135 aaPredicted RBP25.05■■□□□ 1.6
SMIM4-205ENST00000491607 ZNF530Q6P9A1 599 aaPredicted RBP25.05■■□□□ 1.6
SMIM4-205ENST00000491607 LINC00116Q8NCU8 138 aa25.05■■□□□ 1.6
SMIM4-205ENST00000491607 ATG3Q9NT62 314 aa25.05■■□□□ 1.6
SMIM4-205ENST00000491607 AMOTQ4VCS5 1084 aa25.04■■□□□ 1.6
SMIM4-205ENST00000491607 SMIM5Q71RC9 77 aa25.04■■□□□ 1.6
SMIM4-205ENST00000491607 AMIGO3Q86WK7 504 aa25.04■■□□□ 1.6
SMIM4-205ENST00000491607 DCAF5Q96JK2 942 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms