RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 MORC1Q86VD1 984 aa15.77■□□□□ 0.12
SRGAP3-210ENST00000491467 SLC16A10Q8TF71 515 aa15.77■□□□□ 0.12
SRGAP3-210ENST00000491467 THRAP3Q9Y2W1 955 aaKnown RBP15.77■□□□□ 0.12
SRGAP3-210ENST00000491467 ZC3H6P61129 1189 aaKnown RBP15.76■□□□□ 0.11
SRGAP3-210ENST00000491467 PRAM1Q96QH2 718 aa15.76■□□□□ 0.11
SRGAP3-210ENST00000491467 ATP7BP35670 1465 aa15.76■□□□□ 0.11
SRGAP3-210ENST00000491467 MLLT1Q03111 559 aaPredicted RBP15.75■□□□□ 0.11
SRGAP3-210ENST00000491467 PLEKHH1Q9ULM0 1364 aa15.75■□□□□ 0.11
SRGAP3-210ENST00000491467 PAK3O75914 559 aaPredicted RBP15.74■□□□□ 0.11
SRGAP3-210ENST00000491467 SRPK2P78362 688 aaKnown RBP15.74■□□□□ 0.11
SRGAP3-210ENST00000491467 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
SRGAP3-210ENST00000491467 C16orf71Q8IYS4 520 aaPredicted RBP15.74■□□□□ 0.11
SRGAP3-210ENST00000491467 LRRC37A3O60309 1634 aa15.73■□□□□ 0.11
SRGAP3-210ENST00000491467 DDB1Q16531 1140 aa15.73■□□□□ 0.11
SRGAP3-210ENST00000491467 CFAP53Q96M91 514 aa15.73■□□□□ 0.11
SRGAP3-210ENST00000491467 PHRF1Q9P1Y6 1649 aaKnown RBP15.72■□□□□ 0.11
SRGAP3-210ENST00000491467 QSER1Q2KHR3 1735 aa15.72■□□□□ 0.11
SRGAP3-210ENST00000491467 HDGFL2Q7Z4V5 671 aaPredicted RBP15.72■□□□□ 0.11
SRGAP3-210ENST00000491467 RBM46Q8TBY0 533 aaKnown RBP15.72■□□□□ 0.11
SRGAP3-210ENST00000491467 CABP2Q9NPB3 220 aa15.72■□□□□ 0.11
SRGAP3-210ENST00000491467 ZNF827Q17R98 1081 aa15.71■□□□□ 0.11
SRGAP3-210ENST00000491467 CDK19Q9BWU1 502 aa15.71■□□□□ 0.11
SRGAP3-210ENST00000491467 PAPPAQ13219 1627 aa15.71■□□□□ 0.11
SRGAP3-210ENST00000491467 MINK1Q8N4C8 1332 aaPredicted RBP15.7■□□□□ 0.1
SRGAP3-210ENST00000491467 RCAN3Q9UKA8 241 aa15.7■□□□□ 0.1
SRGAP3-210ENST00000491467 NMRK2Q9NPI5 230 aa15.69■□□□□ 0.1
SRGAP3-210ENST00000491467 ZNF521Q96K83 1311 aa15.68■□□□□ 0.1
SRGAP3-210ENST00000491467 ITSN1Q15811 1721 aa15.68■□□□□ 0.1
SRGAP3-210ENST00000491467 KAT6BQ8WYB5 2073 aa15.68■□□□□ 0.1
SRGAP3-210ENST00000491467 A0A1W2PP64 1363 aa15.68■□□□□ 0.1
SRGAP3-210ENST00000491467 FSTL1Q12841 308 aa15.68■□□□□ 0.1
SRGAP3-210ENST00000491467 CD163L1Q9NR16 1453 aa15.67■□□□□ 0.1
SRGAP3-210ENST00000491467 TUBGCP6Q96RT7 1819 aa15.67■□□□□ 0.1
SRGAP3-210ENST00000491467 GOLGA2Q08379 1002 aa15.67■□□□□ 0.1
SRGAP3-210ENST00000491467 SAFB2Q14151 953 aaKnown RBP eCLIP15.67■□□□□ 0.1
SRGAP3-210ENST00000491467 USP19O94966 1318 aa15.67■□□□□ 0.1
SRGAP3-210ENST00000491467 MON2Q7Z3U7 1717 aa15.66■□□□□ 0.1
SRGAP3-210ENST00000491467 MARCH10Q8NA82 808 aaPredicted RBP15.66■□□□□ 0.1
SRGAP3-210ENST00000491467 MAP2P11137 1827 aaKnown RBP15.66■□□□□ 0.1
SRGAP3-210ENST00000491467 WASLO00401 505 aaPredicted RBP15.65■□□□□ 0.1
SRGAP3-210ENST00000491467 RRP1P56182 461 aaKnown RBP15.64■□□□□ 0.09
SRGAP3-210ENST00000491467 IRX6P78412 446 aaPredicted RBP15.64■□□□□ 0.09
SRGAP3-210ENST00000491467 MTHFSP49914 203 aa15.63■□□□□ 0.09
SRGAP3-210ENST00000491467 TRMT2AQ8IZ69 625 aaKnown RBP15.63■□□□□ 0.09
SRGAP3-210ENST00000491467 RUNDC1Q96C34 613 aa15.63■□□□□ 0.09
SRGAP3-210ENST00000491467 WNK3Q9BYP7 1800 aa15.63■□□□□ 0.09
SRGAP3-210ENST00000491467 FYB1O15117 783 aa15.62■□□□□ 0.09
SRGAP3-210ENST00000491467 SLFN5Q08AF3 891 aa15.62■□□□□ 0.09
SRGAP3-210ENST00000491467 ZNF692Q9BU19 519 aaPredicted RBP15.62■□□□□ 0.09
SRGAP3-210ENST00000491467 PNNQ9H307 717 aaKnown RBP15.62■□□□□ 0.09
SRGAP3-210ENST00000491467 SALL2Q9Y467 1007 aaPredicted RBP15.62■□□□□ 0.09
SRGAP3-210ENST00000491467 LMO7Q8WWI1 1683 aa15.62■□□□□ 0.09
SRGAP3-210ENST00000491467 PNPLA7Q6ZV29 1317 aa15.62■□□□□ 0.09
SRGAP3-210ENST00000491467 CPSF1Q10570 1443 aaKnown RBP15.61■□□□□ 0.09
SRGAP3-210ENST00000491467 EDC4Q6P2E9 1401 aaKnown RBP15.61■□□□□ 0.09
SRGAP3-210ENST00000491467 E9PSI1 815 aa15.61■□□□□ 0.09
SRGAP3-210ENST00000491467 NUTM2GQ5VZR2 741 aa15.61■□□□□ 0.09
SRGAP3-210ENST00000491467 CDCA7LQ96GN5 454 aa15.61■□□□□ 0.09
SRGAP3-210ENST00000491467 CABP1Q9NZU7 370 aa15.61■□□□□ 0.09
SRGAP3-210ENST00000491467 BCL9O00512 1426 aa15.6■□□□□ 0.09
SRGAP3-210ENST00000491467 CRB1P82279 1406 aa15.6■□□□□ 0.09
SRGAP3-210ENST00000491467 APAF1O14727 1248 aa15.6■□□□□ 0.09
SRGAP3-210ENST00000491467 CCDC27Q2M243 656 aa15.6■□□□□ 0.09
SRGAP3-210ENST00000491467 DUSP27Q5VZP5 1158 aa15.6■□□□□ 0.09
SRGAP3-210ENST00000491467 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
SRGAP3-210ENST00000491467 ABHD8Q96I13 439 aa15.6■□□□□ 0.09
SRGAP3-210ENST00000491467 TFCP2L1Q9NZI6 479 aa15.6■□□□□ 0.09
SRGAP3-210ENST00000491467 CD2APQ9Y5K6 639 aa15.6■□□□□ 0.09
SRGAP3-210ENST00000491467 BTAF1O14981 1849 aa15.59■□□□□ 0.09
SRGAP3-210ENST00000491467 MSH5O43196 834 aa15.59■□□□□ 0.09
SRGAP3-210ENST00000491467 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.59■□□□□ 0.09
SRGAP3-210ENST00000491467 PRDM10Q9NQV6 1147 aa15.59■□□□□ 0.09
SRGAP3-210ENST00000491467 TSHZ2Q9NRE2 1034 aa15.59■□□□□ 0.09
SRGAP3-210ENST00000491467 CCDC61Q9Y6R9 512 aa15.59■□□□□ 0.09
SRGAP3-210ENST00000491467 NHSQ6T4R5 1651 aa15.59■□□□□ 0.09
SRGAP3-210ENST00000491467 NGDNQ8NEJ9 315 aaKnown RBP15.58■□□□□ 0.08
SRGAP3-210ENST00000491467 LRRC4BQ9NT99 713 aa15.58■□□□□ 0.08
SRGAP3-210ENST00000491467 PPIP5K1Q6PFW1 1433 aa15.58■□□□□ 0.08
SRGAP3-210ENST00000491467 ANKARQ7Z5J8 1434 aa15.58■□□□□ 0.08
SRGAP3-210ENST00000491467 CCDC85CA6NKD9 419 aa15.57■□□□□ 0.08
SRGAP3-210ENST00000491467 FOXN1O15353 648 aa15.57■□□□□ 0.08
SRGAP3-210ENST00000491467 WDR63Q8IWG1 891 aa15.57■□□□□ 0.08
SRGAP3-210ENST00000491467 NUDT16Q96DE0 195 aaKnown RBP15.57■□□□□ 0.08
SRGAP3-210ENST00000491467 ACSBG1Q96GR2 724 aa15.57■□□□□ 0.08
SRGAP3-210ENST00000491467 RGS19P49795 217 aa15.56■□□□□ 0.08
SRGAP3-210ENST00000491467 COL5A2P05997 1499 aaPredicted RBP15.56■□□□□ 0.08
SRGAP3-210ENST00000491467 COL3A1P02461 1466 aaPredicted RBP15.55■□□□□ 0.08
SRGAP3-210ENST00000491467 TNNT2P45379 298 aaPredicted RBP15.55■□□□□ 0.08
SRGAP3-210ENST00000491467 MSL1Q68DK7 614 aa15.55■□□□□ 0.08
SRGAP3-210ENST00000491467 CCDC146Q8IYE0 955 aa15.55■□□□□ 0.08
SRGAP3-210ENST00000491467 CCDC136Q96JN2 1154 aa15.55■□□□□ 0.08
SRGAP3-210ENST00000491467 GGNBP2Q9H3C7 697 aa15.55■□□□□ 0.08
SRGAP3-210ENST00000491467 IGSF1Q8N6C5 1336 aa15.54■□□□□ 0.08
SRGAP3-210ENST00000491467 TOM1L2Q6ZVM7 507 aa15.54■□□□□ 0.08
SRGAP3-210ENST00000491467 TNRC18O15417 2968 aaPredicted RBP15.54■□□□□ 0.08
SRGAP3-210ENST00000491467 ZBTB7CA1YPR0 619 aa15.53■□□□□ 0.08
SRGAP3-210ENST00000491467 WWC1Q8IX03 1113 aa15.53■□□□□ 0.08
SRGAP3-210ENST00000491467 SMC1BQ8NDV3 1235 aa15.53■□□□□ 0.08
SRGAP3-210ENST00000491467 PLEKHG3A1L390 1219 aa15.52■□□□□ 0.08
SRGAP3-210ENST00000491467 EXOC5O00471 708 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms