RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 NCAPD2Q15021 1401 aa21.8■■□□□ 1.08
PFDN6-207ENST00000491382 EZH2Q15910 746 aaKnown RBP21.79■■□□□ 1.08
PFDN6-207ENST00000491382 CC2D1BQ5T0F9 858 aaKnown RBP21.79■■□□□ 1.08
PFDN6-207ENST00000491382 CAMKK2Q96RR4 588 aa21.79■■□□□ 1.08
PFDN6-207ENST00000491382 EIF4A2Q14240 407 aaKnown RBP21.78■■□□□ 1.08
PFDN6-207ENST00000491382 EYA1Q99502 592 aa21.77■■□□□ 1.08
PFDN6-207ENST00000491382 PKD1L3Q7Z443 1732 aa21.77■■□□□ 1.08
PFDN6-207ENST00000491382 KAT6BQ8WYB5 2073 aa21.76■■□□□ 1.07
PFDN6-207ENST00000491382 PCDH11XQ9BZA7 1347 aa21.76■■□□□ 1.07
PFDN6-207ENST00000491382 PCDH11YQ9BZA8 1340 aa21.76■■□□□ 1.07
PFDN6-207ENST00000491382 NUP188Q5SRE5 1749 aa21.75■■□□□ 1.07
PFDN6-207ENST00000491382 DOT1LQ8TEK3 1739 aa21.75■■□□□ 1.07
PFDN6-207ENST00000491382 PLSCR1O15162 318 aa21.75■■□□□ 1.07
PFDN6-207ENST00000491382 ACSBG1Q96GR2 724 aa21.75■■□□□ 1.07
PFDN6-207ENST00000491382 BTAF1O14981 1849 aa21.73■■□□□ 1.07
PFDN6-207ENST00000491382 ZEB1P37275 1124 aaPredicted RBP21.73■■□□□ 1.07
PFDN6-207ENST00000491382 PTF1AQ7RTS3 328 aa21.73■■□□□ 1.07
PFDN6-207ENST00000491382 IGSF1Q8N6C5 1336 aa21.73■■□□□ 1.07
PFDN6-207ENST00000491382 PLEKHG2Q9H7P9 1386 aa21.73■■□□□ 1.07
PFDN6-207ENST00000491382 KCNQ2O43526 872 aa21.72■■□□□ 1.07
PFDN6-207ENST00000491382 MTHFSP49914 203 aa21.71■■□□□ 1.07
PFDN6-207ENST00000491382 CNGB1Q14028 1251 aaPredicted RBP21.71■■□□□ 1.07
PFDN6-207ENST00000491382 SPG7Q9UQ90 795 aa21.71■■□□□ 1.07
PFDN6-207ENST00000491382 NBPF14Q5TI25 921 aa21.69■■□□□ 1.06
PFDN6-207ENST00000491382 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.69■■□□□ 1.064e-8■■□□□ 13.1
PFDN6-207ENST00000491382 SYTL4Q96C24 671 aaPredicted RBP21.68■■□□□ 1.06
PFDN6-207ENST00000491382 CYP27B1O15528 508 aa21.65■■□□□ 1.06
PFDN6-207ENST00000491382 IL13P35225 146 aa21.65■■□□□ 1.06
PFDN6-207ENST00000491382 PRIM1P49642 420 aaKnown RBP21.65■■□□□ 1.06
PFDN6-207ENST00000491382 PSDA5PKW4 1024 aaPredicted RBP21.64■■□□□ 1.05
PFDN6-207ENST00000491382 R3HDM1Q15032 1099 aaKnown RBP21.64■■□□□ 1.05
PFDN6-207ENST00000491382 TXNRD1Q16881 649 aa21.64■■□□□ 1.05
PFDN6-207ENST00000491382 DIAPH1O60610 1272 aaKnown RBP21.63■■□□□ 1.05
PFDN6-207ENST00000491382 KDRP35968 1356 aa21.62■■□□□ 1.05
PFDN6-207ENST00000491382 SULT6B1Q6IMI4 303 aa21.62■■□□□ 1.05
PFDN6-207ENST00000491382 IFNL2Q8IZJ0 200 aa21.62■■□□□ 1.05
PFDN6-207ENST00000491382 TOGARAM1Q9Y4F4 1720 aa21.62■■□□□ 1.05
PFDN6-207ENST00000491382 ITGB4P16144 1822 aa21.62■■□□□ 1.05
PFDN6-207ENST00000491382 AMOTQ4VCS5 1084 aa21.61■■□□□ 1.05
PFDN6-207ENST00000491382 PLEKHO1Q53GL0 409 aaPredicted RBP21.61■■□□□ 1.05
PFDN6-207ENST00000491382 NKX1-1Q15270 411 aaPredicted RBP21.6■■□□□ 1.05
PFDN6-207ENST00000491382 AEBP1Q8IUX7 1158 aa21.6■■□□□ 1.05
PFDN6-207ENST00000491382 PROM2Q8N271 834 aa21.6■■□□□ 1.05
PFDN6-207ENST00000491382 CFAP53Q96M91 514 aa21.6■■□□□ 1.05
PFDN6-207ENST00000491382 LY75O60449 1722 aa21.6■■□□□ 1.05
PFDN6-207ENST00000491382 COL3A1P02461 1466 aaPredicted RBP21.59■■□□□ 1.05
PFDN6-207ENST00000491382 PHKG2P15735 406 aa21.59■■□□□ 1.05
PFDN6-207ENST00000491382 HSP90AB1P08238 724 aaKnown RBP21.57■■□□□ 1.04
PFDN6-207ENST00000491382 SLC27A3Q5K4L6 730 aa21.57■■□□□ 1.04
PFDN6-207ENST00000491382 LRP5O75197 1615 aa21.56■■□□□ 1.04
PFDN6-207ENST00000491382 PPP2R1AP30153 589 aa21.56■■□□□ 1.04
PFDN6-207ENST00000491382 ZNF530Q6P9A1 599 aaPredicted RBP21.56■■□□□ 1.04
PFDN6-207ENST00000491382 MPRIPQ6WCQ1 1025 aa21.56■■□□□ 1.04
PFDN6-207ENST00000491382 PAPPAQ13219 1627 aa21.55■■□□□ 1.04
PFDN6-207ENST00000491382 ANO8Q9HCE9 1232 aaPredicted RBP21.55■■□□□ 1.04
PFDN6-207ENST00000491382 STK32BQ9NY57 414 aa21.55■■□□□ 1.04
PFDN6-207ENST00000491382 HMOX1P09601 288 aa21.54■■□□□ 1.04
PFDN6-207ENST00000491382 C1orf141Q5JVX7 400 aa21.54■■□□□ 1.04
PFDN6-207ENST00000491382 U2SURPO15042 1029 aaKnown RBP21.53■■□□□ 1.04
PFDN6-207ENST00000491382 DDX10Q13206 875 aaKnown RBP21.53■■□□□ 1.04
PFDN6-207ENST00000491382 TMOD3Q9NYL9 352 aa21.53■■□□□ 1.04
PFDN6-207ENST00000491382 DCAF5Q96JK2 942 aa21.52■■□□□ 1.04
PFDN6-207ENST00000491382 NUDCQ9Y266 331 aa21.52■■□□□ 1.04
PFDN6-207ENST00000491382 SLC15A2Q16348 729 aa21.51■■□□□ 1.03
PFDN6-207ENST00000491382 SMARCC1Q92922 1105 aaPredicted RBP21.51■■□□□ 1.03
PFDN6-207ENST00000491382 PALLDQ8WX93 1383 aa21.5■■□□□ 1.03
PFDN6-207ENST00000491382 HMGB2P26583 209 aaKnown RBP21.5■■□□□ 1.03
PFDN6-207ENST00000491382 LRRC4BQ9NT99 713 aa21.5■■□□□ 1.03
PFDN6-207ENST00000491382 CCNL1Q9UK58 526 aaPredicted RBP21.5■■□□□ 1.03
PFDN6-207ENST00000491382 CASZ1Q86V15 1759 aa21.49■■□□□ 1.03
PFDN6-207ENST00000491382 ERVV-2B6SEH9 535 aa21.49■■□□□ 1.03
PFDN6-207ENST00000491382 PIGBQ92521 554 aa21.49■■□□□ 1.03
PFDN6-207ENST00000491382 SCN11AQ9UI33 1791 aa21.48■■□□□ 1.03
PFDN6-207ENST00000491382 C5P01031 1676 aa21.48■■□□□ 1.03
PFDN6-207ENST00000491382 SRCAPQ6ZRS2 3230 aa21.48■■□□□ 1.03
PFDN6-207ENST00000491382 KDM6AO15550 1401 aaPredicted RBP21.47■■□□□ 1.03
PFDN6-207ENST00000491382 QSER1Q2KHR3 1735 aa21.47■■□□□ 1.03
PFDN6-207ENST00000491382 AKAP4Q5JQC9 854 aa21.47■■□□□ 1.03
PFDN6-207ENST00000491382 VIRMAQ69YN4 1812 aaKnown RBP21.47■■□□□ 1.03
PFDN6-207ENST00000491382 TAF1LQ8IZX4 1826 aa21.46■■□□□ 1.03
PFDN6-207ENST00000491382 RALBP1Q15311 655 aa21.46■■□□□ 1.03
PFDN6-207ENST00000491382 CABP4P57796 275 aa21.45■■□□□ 1.02
PFDN6-207ENST00000491382 KCNQ4P56696 695 aa21.44■■□□□ 1.02
PFDN6-207ENST00000491382 ZNF827Q17R98 1081 aa21.43■■□□□ 1.02
PFDN6-207ENST00000491382 MTHFSDQ2M296 383 aaKnown RBP21.43■■□□□ 1.02
PFDN6-207ENST00000491382 AKT1S1Q96B36 256 aa21.43■■□□□ 1.02
PFDN6-207ENST00000491382 U2AF1L5P0DN76 240 aaPredicted RBP21.42■■□□□ 1.02
PFDN6-207ENST00000491382 U2AF1Q01081 240 aaKnown RBP eCLIP21.42■■□□□ 1.02
PFDN6-207ENST00000491382 TUBGCP6Q96RT7 1819 aa21.42■■□□□ 1.02
PFDN6-207ENST00000491382 SPON1Q9HCB6 807 aa21.42■■□□□ 1.02
PFDN6-207ENST00000491382 GAS2L2Q8NHY3 880 aa21.41■■□□□ 1.02
PFDN6-207ENST00000491382 TFCP2L1Q9NZI6 479 aa21.41■■□□□ 1.02
PFDN6-207ENST00000491382 ASAP1Q9ULH1 1129 aa21.41■■□□□ 1.02
PFDN6-207ENST00000491382 PRKAR2BP31323 418 aa21.4■■□□□ 1.02
PFDN6-207ENST00000491382 RSPH6AQ9H0K4 717 aa21.4■■□□□ 1.02
PFDN6-207ENST00000491382 ATG3Q9NT62 314 aa21.4■■□□□ 1.02
PFDN6-207ENST00000491382 C4BP0C0L5 1744 aa21.4■■□□□ 1.02
PFDN6-207ENST00000491382 ADAMTS7Q9UKP4 1686 aa21.4■■□□□ 1.02
PFDN6-207ENST00000491382 LOC102724428A0A0B4J2F2 783 aa21.39■■□□□ 1.01
PFDN6-207ENST00000491382 FCHSD2O94868 740 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms