RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 MEGF6O75095 1541 aa11.93□□□□□ -0.5
GABRE-211ENST00000491339 PKD1L3Q7Z443 1732 aa11.93□□□□□ -0.5
GABRE-211ENST00000491339 R3HDM1Q15032 1099 aaKnown RBP11.93□□□□□ -0.5
GABRE-211ENST00000491339 PLSCR1O15162 318 aa11.92□□□□□ -0.5
GABRE-211ENST00000491339 FBLN1P23142 703 aa11.91□□□□□ -0.5
GABRE-211ENST00000491339 RAPGEF4Q8WZA2 1011 aa11.91□□□□□ -0.5
GABRE-211ENST00000491339 PPM1GO15355 546 aaPredicted RBP11.9□□□□□ -0.5
GABRE-211ENST00000491339 EMILIN1Q9Y6C2 1016 aa11.9□□□□□ -0.51
GABRE-211ENST00000491339 CASZ1Q86V15 1759 aa11.89□□□□□ -0.51
GABRE-211ENST00000491339 TATP17735 454 aaPredicted RBP11.89□□□□□ -0.51
GABRE-211ENST00000491339 HSP90AB2PQ58FF8 381 aa11.89□□□□□ -0.51
GABRE-211ENST00000491339 DDX54Q8TDD1 881 aaKnown RBP11.89□□□□□ -0.51
GABRE-211ENST00000491339 ACSBG1Q96GR2 724 aa11.89□□□□□ -0.51
GABRE-211ENST00000491339 PANK3Q9H999 370 aa11.89□□□□□ -0.51
GABRE-211ENST00000491339 LY75O60449 1722 aa11.89□□□□□ -0.51
GABRE-211ENST00000491339 PCDH11XQ9BZA7 1347 aa11.88□□□□□ -0.51
GABRE-211ENST00000491339 PCDH11YQ9BZA8 1340 aa11.88□□□□□ -0.51
GABRE-211ENST00000491339 PAPPAQ13219 1627 aa11.88□□□□□ -0.51
GABRE-211ENST00000491339 NBPF6Q5VWK0 638 aa11.88□□□□□ -0.51
GABRE-211ENST00000491339 USHBP1Q8N6Y0 703 aa11.88□□□□□ -0.51
GABRE-211ENST00000491339 ZCRB1Q8TBF4 217 aaKnown RBP11.88□□□□□ -0.51
GABRE-211ENST00000491339 NBPF4Q96M43 638 aa11.88□□□□□ -0.51
GABRE-211ENST00000491339 KNSTRNQ9Y448 316 aa11.88□□□□□ -0.51
GABRE-211ENST00000491339 NCAPD2Q15021 1401 aa11.88□□□□□ -0.51
GABRE-211ENST00000491339 QSER1Q2KHR3 1735 aa11.87□□□□□ -0.51
GABRE-211ENST00000491339 KIF7Q2M1P5 1343 aa11.87□□□□□ -0.51
GABRE-211ENST00000491339 WASHC2AQ641Q2 1341 aa11.87□□□□□ -0.51
GABRE-211ENST00000491339 ITGB4P16144 1822 aa11.87□□□□□ -0.51
GABRE-211ENST00000491339 KCNQ2O43526 872 aa11.86□□□□□ -0.51
GABRE-211ENST00000491339 TNNT2P45379 298 aaPredicted RBP11.86□□□□□ -0.51
GABRE-211ENST00000491339 TXNRD1Q16881 649 aa11.86□□□□□ -0.51
GABRE-211ENST00000491339 PTF1AQ7RTS3 328 aa11.86□□□□□ -0.51
GABRE-211ENST00000491339 STK32BQ9NY57 414 aa11.86□□□□□ -0.51
GABRE-211ENST00000491339 TOGARAM1Q9Y4F4 1720 aa11.86□□□□□ -0.51
GABRE-211ENST00000491339 SRCAPQ6ZRS2 3230 aa11.86□□□□□ -0.51
GABRE-211ENST00000491339 SYTL4Q96C24 671 aaPredicted RBP11.85□□□□□ -0.51
GABRE-211ENST00000491339 PLEKHG2Q9H7P9 1386 aa11.85□□□□□ -0.51
GABRE-211ENST00000491339 MORC1Q86VD1 984 aa11.85□□□□□ -0.51
GABRE-211ENST00000491339 POLKQ9UBT6 870 aa11.84□□□□□ -0.51
GABRE-211ENST00000491339 TUBGCP6Q96RT7 1819 aa11.84□□□□□ -0.51
GABRE-211ENST00000491339 C5P01031 1676 aa11.83□□□□□ -0.52
GABRE-211ENST00000491339 ANO8Q9HCE9 1232 aaPredicted RBP11.83□□□□□ -0.52
GABRE-211ENST00000491339 SPG7Q9UQ90 795 aa11.82□□□□□ -0.52
GABRE-211ENST00000491339 SLC27A3Q5K4L6 730 aa11.82□□□□□ -0.52
GABRE-211ENST00000491339 SPON1Q9HCB6 807 aa11.82□□□□□ -0.52
GABRE-211ENST00000491339 EIF4A2Q14240 407 aaKnown RBP11.81□□□□□ -0.52
GABRE-211ENST00000491339 PPP1R1BQ9UD71 204 aaPredicted RBP11.81□□□□□ -0.52
GABRE-211ENST00000491339 TAF1LQ8IZX4 1826 aa11.81□□□□□ -0.52
GABRE-211ENST00000491339 PRIM1P49642 420 aaKnown RBP11.8□□□□□ -0.52
GABRE-211ENST00000491339 SLC15A2Q16348 729 aa11.8□□□□□ -0.52
GABRE-211ENST00000491339 PROM2Q8N271 834 aa11.8□□□□□ -0.52
GABRE-211ENST00000491339 EYA1Q99502 592 aa11.8□□□□□ -0.52
GABRE-211ENST00000491339 IGSF1Q8N6C5 1336 aa11.8□□□□□ -0.52
GABRE-211ENST00000491339 HMGB2P26583 209 aaKnown RBP11.79□□□□□ -0.52
GABRE-211ENST00000491339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.523e-10■■□□□ 11.6
GABRE-211ENST00000491339 CNKSR2Q8WXI2 1034 aa11.79□□□□□ -0.52
GABRE-211ENST00000491339 VIRMAQ69YN4 1812 aaKnown RBP11.78□□□□□ -0.52
GABRE-211ENST00000491339 AMER1Q5JTC6 1135 aaPredicted RBP11.78□□□□□ -0.52
GABRE-211ENST00000491339 CYP27B1O15528 508 aa11.77□□□□□ -0.52
GABRE-211ENST00000491339 CCNL1Q9UK58 526 aaPredicted RBP11.77□□□□□ -0.52
GABRE-211ENST00000491339 NPC1L1Q9UHC9 1359 aa11.77□□□□□ -0.53
GABRE-211ENST00000491339 PALLDQ8WX93 1383 aa11.77□□□□□ -0.53
GABRE-211ENST00000491339 ZEB1P37275 1124 aaPredicted RBP11.76□□□□□ -0.53
GABRE-211ENST00000491339 IFNL2Q8IZJ0 200 aa11.76□□□□□ -0.53
GABRE-211ENST00000491339 C4BP0C0L5 1744 aa11.76□□□□□ -0.53
GABRE-211ENST00000491339 CC2D1BQ5T0F9 858 aaKnown RBP11.75□□□□□ -0.53
GABRE-211ENST00000491339 MPRIPQ6WCQ1 1025 aa11.75□□□□□ -0.53
GABRE-211ENST00000491339 SMARCC1Q92922 1105 aaPredicted RBP11.75□□□□□ -0.53
GABRE-211ENST00000491339 MTFR1LQ9H019 292 aa11.75□□□□□ -0.53
GABRE-211ENST00000491339 SCN11AQ9UI33 1791 aa11.75□□□□□ -0.53
GABRE-211ENST00000491339 COL24A1Q17RW2 1714 aa11.75□□□□□ -0.53
GABRE-211ENST00000491339 ZBTB7AO95365 584 aa11.75□□□□□ -0.53
GABRE-211ENST00000491339 HSP90AB1P08238 724 aaKnown RBP11.75□□□□□ -0.53
GABRE-211ENST00000491339 ZNF827Q17R98 1081 aa11.75□□□□□ -0.53
GABRE-211ENST00000491339 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
GABRE-211ENST00000491339 TMOD3Q9NYL9 352 aa11.75□□□□□ -0.53
GABRE-211ENST00000491339 PHKG2P15735 406 aa11.74□□□□□ -0.53
GABRE-211ENST00000491339 NKX1-1Q15270 411 aaPredicted RBP11.74□□□□□ -0.53
GABRE-211ENST00000491339 AMOTQ4VCS5 1084 aa11.74□□□□□ -0.53
GABRE-211ENST00000491339 PLEKHO1Q53GL0 409 aaPredicted RBP11.74□□□□□ -0.53
GABRE-211ENST00000491339 KDRP35968 1356 aa11.74□□□□□ -0.53
GABRE-211ENST00000491339 TFCP2L1Q9NZI6 479 aa11.74□□□□□ -0.53
GABRE-211ENST00000491339 ZNF831Q5JPB2 1677 aa11.74□□□□□ -0.53
GABRE-211ENST00000491339 UBR3Q6ZT12 1888 aa11.73□□□□□ -0.53
GABRE-211ENST00000491339 C1orf141Q5JVX7 400 aa11.73□□□□□ -0.53
GABRE-211ENST00000491339 AKT1S1Q96B36 256 aa11.73□□□□□ -0.53
GABRE-211ENST00000491339 PER1O15534 1290 aaPredicted RBP11.72□□□□□ -0.53
GABRE-211ENST00000491339 ZNF530Q6P9A1 599 aaPredicted RBP11.72□□□□□ -0.53
GABRE-211ENST00000491339 MTHFSP49914 203 aa11.72□□□□□ -0.53
GABRE-211ENST00000491339 COL5A3P25940 1745 aaPredicted RBP11.71□□□□□ -0.53
GABRE-211ENST00000491339 IL13P35225 146 aa11.71□□□□□ -0.53
GABRE-211ENST00000491339 SULT6B1Q6IMI4 303 aa11.71□□□□□ -0.53
GABRE-211ENST00000491339 SLC16A10Q8TF71 515 aa11.71□□□□□ -0.53
GABRE-211ENST00000491339 PDGFDQ9GZP0 370 aaPredicted RBP11.71□□□□□ -0.53
GABRE-211ENST00000491339 ATF5Q9Y2D1 282 aaPredicted RBP11.71□□□□□ -0.53
GABRE-211ENST00000491339 PNPLA7Q6ZV29 1317 aa11.71□□□□□ -0.54
GABRE-211ENST00000491339 COL3A1P02461 1466 aaPredicted RBP11.71□□□□□ -0.54
GABRE-211ENST00000491339 KCNQ4P56696 695 aa11.71□□□□□ -0.54
GABRE-211ENST00000491339 AEBP1Q8IUX7 1158 aa11.71□□□□□ -0.54
GABRE-211ENST00000491339 DCAF5Q96JK2 942 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms