RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 KIF24Q5T7B8 1368 aa18.33■□□□□ 0.53
DNMT3A-214ENST00000491288 ZNF316A6NFI3 1004 aaPredicted RBP18.33■□□□□ 0.52
DNMT3A-214ENST00000491288 POLKQ9UBT6 870 aa18.33■□□□□ 0.52
DNMT3A-214ENST00000491288 PPP1R1BQ9UD71 204 aaPredicted RBP18.33■□□□□ 0.52
DNMT3A-214ENST00000491288 EMILIN1Q9Y6C2 1016 aa18.33■□□□□ 0.52
DNMT3A-214ENST00000491288 SGIP1Q9BQI5 828 aa18.32■□□□□ 0.52
DNMT3A-214ENST00000491288 STK32BQ9NY57 414 aa18.32■□□□□ 0.52
DNMT3A-214ENST00000491288 ANKRD26Q9UPS8 1709 aa18.32■□□□□ 0.52
DNMT3A-214ENST00000491288 NHSQ6T4R5 1651 aa18.31■□□□□ 0.52
DNMT3A-214ENST00000491288 RTL1A6NKG5 1358 aa18.31■□□□□ 0.52
DNMT3A-214ENST00000491288 MAP2P11137 1827 aaKnown RBP18.31■□□□□ 0.52
DNMT3A-214ENST00000491288 ACSBG1Q96GR2 724 aa18.31■□□□□ 0.52
DNMT3A-214ENST00000491288 FLT4P35916 1363 aa18.3■□□□□ 0.52
DNMT3A-214ENST00000491288 NPC1L1Q9UHC9 1359 aa18.3■□□□□ 0.52
DNMT3A-214ENST00000491288 ZBTB7AO95365 584 aa18.3■□□□□ 0.52
DNMT3A-214ENST00000491288 HSP90AB2PQ58FF8 381 aa18.3■□□□□ 0.52
DNMT3A-214ENST00000491288 SMG6Q86US8 1419 aaKnown RBP18.3■□□□□ 0.52
DNMT3A-214ENST00000491288 INSRP06213 1382 aa18.29■□□□□ 0.52
DNMT3A-214ENST00000491288 PAPPAQ13219 1627 aa18.28■□□□□ 0.52
DNMT3A-214ENST00000491288 MTFR1LQ9H019 292 aa18.28■□□□□ 0.52
DNMT3A-214ENST00000491288 UTRNP46939 3433 aa18.28■□□□□ 0.52
DNMT3A-214ENST00000491288 LRRC4BQ9NT99 713 aa18.27■□□□□ 0.52
DNMT3A-214ENST00000491288 YY1P25490 414 aa18.26■□□□□ 0.51
DNMT3A-214ENST00000491288 MTHFSP49914 203 aa18.25■□□□□ 0.51
DNMT3A-214ENST00000491288 ATF5Q9Y2D1 282 aaPredicted RBP18.25■□□□□ 0.51
DNMT3A-214ENST00000491288 ZNF827Q17R98 1081 aa18.24■□□□□ 0.51
DNMT3A-214ENST00000491288 SLC27A3Q5K4L6 730 aa18.24■□□□□ 0.51
DNMT3A-214ENST00000491288 AKT1S1Q96B36 256 aa18.24■□□□□ 0.51
DNMT3A-214ENST00000491288 SYT17Q9BSW7 474 aa18.24■□□□□ 0.51
DNMT3A-214ENST00000491288 DDX54Q8TDD1 881 aaKnown RBP18.23■□□□□ 0.51
DNMT3A-214ENST00000491288 FAM208AQ9UK61 1670 aaKnown RBP18.22■□□□□ 0.51
DNMT3A-214ENST00000491288 MAP3K5Q99683 1374 aa18.22■□□□□ 0.51
DNMT3A-214ENST00000491288 NBPF6Q5VWK0 638 aa18.22■□□□□ 0.51
DNMT3A-214ENST00000491288 NBPF4Q96M43 638 aa18.22■□□□□ 0.51
DNMT3A-214ENST00000491288 DCAF8L1A6NGE4 600 aa18.21■□□□□ 0.51
DNMT3A-214ENST00000491288 RAPGEF4Q8WZA2 1011 aa18.21■□□□□ 0.51
DNMT3A-214ENST00000491288 CFAP53Q96M91 514 aa18.21■□□□□ 0.51
DNMT3A-214ENST00000491288 FHDC1Q9C0D6 1143 aaPredicted RBP18.21■□□□□ 0.51
DNMT3A-214ENST00000491288 BTAF1O14981 1849 aa18.21■□□□□ 0.51
DNMT3A-214ENST00000491288 MEGF6O75095 1541 aa18.2■□□□□ 0.5
DNMT3A-214ENST00000491288 ZCRB1Q8TBF4 217 aaKnown RBP18.2■□□□□ 0.5
DNMT3A-214ENST00000491288 TATP17735 454 aaPredicted RBP18.19■□□□□ 0.5
DNMT3A-214ENST00000491288 PRIM1P49642 420 aaKnown RBP18.19■□□□□ 0.5
DNMT3A-214ENST00000491288 EIF4A2Q14240 407 aaKnown RBP18.19■□□□□ 0.5
DNMT3A-214ENST00000491288 USHBP1Q8N6Y0 703 aa18.19■□□□□ 0.5
DNMT3A-214ENST00000491288 SLC16A10Q8TF71 515 aa18.19■□□□□ 0.5
DNMT3A-214ENST00000491288 RALBP1Q15311 655 aa18.18■□□□□ 0.5
DNMT3A-214ENST00000491288 ARXQ96QS3 562 aa18.18■□□□□ 0.5
DNMT3A-214ENST00000491288 EYA1Q99502 592 aa18.18■□□□□ 0.5
DNMT3A-214ENST00000491288 DIAPH1O60610 1272 aaKnown RBP18.17■□□□□ 0.5
DNMT3A-214ENST00000491288 PPP2R1AP30153 589 aa18.17■□□□□ 0.5
DNMT3A-214ENST00000491288 PNPLA7Q6ZV29 1317 aa18.16■□□□□ 0.5
DNMT3A-214ENST00000491288 RGPD2P0DJD1 1756 aa18.14■□□□□ 0.5
DNMT3A-214ENST00000491288 NUDCQ9Y266 331 aa18.14■□□□□ 0.49
DNMT3A-214ENST00000491288 SHANK3Q9BYB0 1731 aa18.13■□□□□ 0.49
DNMT3A-214ENST00000491288 IL13P35225 146 aa18.13■□□□□ 0.49
DNMT3A-214ENST00000491288 SYTL4Q96C24 671 aaPredicted RBP18.13■□□□□ 0.49
DNMT3A-214ENST00000491288 SPG7Q9UQ90 795 aa18.12■□□□□ 0.49
DNMT3A-214ENST00000491288 NCAPD2Q15021 1401 aa18.12■□□□□ 0.49
DNMT3A-214ENST00000491288 U2SURPO15042 1029 aaKnown RBP18.11■□□□□ 0.49
DNMT3A-214ENST00000491288 KCNQ4P56696 695 aa18.11■□□□□ 0.49
DNMT3A-214ENST00000491288 COL24A1Q17RW2 1714 aa18.1■□□□□ 0.49
DNMT3A-214ENST00000491288 QSER1Q2KHR3 1735 aa18.1■□□□□ 0.49
DNMT3A-214ENST00000491288 IGSF1Q8N6C5 1336 aa18.1■□□□□ 0.49
DNMT3A-214ENST00000491288 SULT6B1Q6IMI4 303 aa18.1■□□□□ 0.49
DNMT3A-214ENST00000491288 TFCP2L1Q9NZI6 479 aa18.1■□□□□ 0.49
DNMT3A-214ENST00000491288 CYP27B1O15528 508 aa18.09■□□□□ 0.49
DNMT3A-214ENST00000491288 CCNL1Q9UK58 526 aaPredicted RBP18.09■□□□□ 0.49
DNMT3A-214ENST00000491288 LY75O60449 1722 aa18.09■□□□□ 0.49
DNMT3A-214ENST00000491288 PCDH11XQ9BZA7 1347 aa18.08■□□□□ 0.49
DNMT3A-214ENST00000491288 PCDH11YQ9BZA8 1340 aa18.08■□□□□ 0.49
DNMT3A-214ENST00000491288 PLEKHO1Q53GL0 409 aaPredicted RBP18.08■□□□□ 0.48
DNMT3A-214ENST00000491288 ZNF784Q8NCA9 323 aaPredicted RBP18.08■□□□□ 0.48
DNMT3A-214ENST00000491288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.08■□□□□ 0.48
DNMT3A-214ENST00000491288 DOT1LQ8TEK3 1739 aa18.08■□□□□ 0.48
DNMT3A-214ENST00000491288 MYBBP1AQ9BQG0 1328 aaKnown RBP18.07■□□□□ 0.48
DNMT3A-214ENST00000491288 HMOX1P09601 288 aa18.06■□□□□ 0.48
DNMT3A-214ENST00000491288 POLD1P28340 1107 aa18.06■□□□□ 0.48
DNMT3A-214ENST00000491288 NKX1-1Q15270 411 aaPredicted RBP18.06■□□□□ 0.48
DNMT3A-214ENST00000491288 AMOTQ4VCS5 1084 aa18.06■□□□□ 0.48
DNMT3A-214ENST00000491288 PRKRIP1Q9H875 184 aaPredicted RBP18.06■□□□□ 0.48
DNMT3A-214ENST00000491288 ANP32CO43423 234 aa18.05■□□□□ 0.48
DNMT3A-214ENST00000491288 COL23A1Q86Y22 540 aaPredicted RBP18.05■□□□□ 0.48
DNMT3A-214ENST00000491288 GOLGB1Q14789 3259 aaKnown RBP18.04■□□□□ 0.48
DNMT3A-214ENST00000491288 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
DNMT3A-214ENST00000491288 HMGB2P26583 209 aaKnown RBP18.04■□□□□ 0.48
DNMT3A-214ENST00000491288 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.48
DNMT3A-214ENST00000491288 AEBP1Q8IUX7 1158 aa18.04■□□□□ 0.48
DNMT3A-214ENST00000491288 KAT6BQ8WYB5 2073 aa18.03■□□□□ 0.48
DNMT3A-214ENST00000491288 IFNL2Q8IZJ0 200 aa18.03■□□□□ 0.48
DNMT3A-214ENST00000491288 PALLDQ8WX93 1383 aa18.03■□□□□ 0.48
DNMT3A-214ENST00000491288 NEFMP07197 916 aa18.02■□□□□ 0.48
DNMT3A-214ENST00000491288 C1orf141Q5JVX7 400 aa18.01■□□□□ 0.47
DNMT3A-214ENST00000491288 MPRIPQ6WCQ1 1025 aa18.01■□□□□ 0.47
DNMT3A-214ENST00000491288 PNNQ9H307 717 aaKnown RBP18.01■□□□□ 0.47
DNMT3A-214ENST00000491288 PLEKHG2Q9H7P9 1386 aa18.01■□□□□ 0.47
DNMT3A-214ENST00000491288 HSP90AB1P08238 724 aaKnown RBP18■□□□□ 0.47
DNMT3A-214ENST00000491288 ZNF530Q6P9A1 599 aaPredicted RBP18■□□□□ 0.47
DNMT3A-214ENST00000491288 FLAD1Q8NFF5 587 aa18■□□□□ 0.47
DNMT3A-214ENST00000491288 NLGN2Q8NFZ4 835 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms