RNA–Protein interactions for RNA: ENST00000491066.1

PLXNA3-206, Transcript of plexin A3, humanhuman

TSL 2

Gene PLXNA3, Length 604 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-206ENST00000491066 HOXC9P31274 260 aa26.31■■□□□ 1.8
PLXNA3-206ENST00000491066 MAP3K19Q56UN5 1328 aa26.31■■□□□ 1.8
PLXNA3-206ENST00000491066 NSD2O96028 1365 aa26.31■■□□□ 1.8
PLXNA3-206ENST00000491066 PELP1Q8IZL8 1130 aaKnown RBP26.3■■□□□ 1.8
PLXNA3-206ENST00000491066 NLGN2Q8NFZ4 835 aa26.3■■□□□ 1.8
PLXNA3-206ENST00000491066 COG3Q96JB2 828 aa26.3■■□□□ 1.8
PLXNA3-206ENST00000491066 AMPHP49418 695 aa26.29■■□□□ 1.8
PLXNA3-206ENST00000491066 GIGYF1O75420 1035 aaPredicted RBP26.28■■□□□ 1.8
PLXNA3-206ENST00000491066 CCNL1Q9UK58 526 aaPredicted RBP26.27■■□□□ 1.8
PLXNA3-206ENST00000491066 LY75O60449 1722 aa26.26■■□□□ 1.79
PLXNA3-206ENST00000491066 GRIN3BO60391 1043 aa26.25■■□□□ 1.79
PLXNA3-206ENST00000491066 FBLN1P23142 703 aa26.25■■□□□ 1.79
PLXNA3-206ENST00000491066 TUBGCP6Q96RT7 1819 aa26.25■■□□□ 1.79
PLXNA3-206ENST00000491066 COL23A1Q86Y22 540 aaPredicted RBP26.24■■□□□ 1.79
PLXNA3-206ENST00000491066 TESK2Q96S53 571 aa26.24■■□□□ 1.79
PLXNA3-206ENST00000491066 DOT1LQ8TEK3 1739 aa26.24■■□□□ 1.79
PLXNA3-206ENST00000491066 CGNL1Q0VF96 1302 aa26.23■■□□□ 1.79
PLXNA3-206ENST00000491066 SLC24A1O60721 1099 aa26.23■■□□□ 1.79
PLXNA3-206ENST00000491066 MEGF6O75095 1541 aa26.23■■□□□ 1.79
PLXNA3-206ENST00000491066 USP47Q96K76 1375 aa26.22■■□□□ 1.79
PLXNA3-206ENST00000491066 MSH5O43196 834 aa26.22■■□□□ 1.79
PLXNA3-206ENST00000491066 YBX3P16989 372 aaKnown RBP eCLIP26.21■■□□□ 1.79
PLXNA3-206ENST00000491066 NBPF6Q5VWK0 638 aa26.21■■□□□ 1.79
PLXNA3-206ENST00000491066 NBPF4Q96M43 638 aa26.21■■□□□ 1.79
PLXNA3-206ENST00000491066 RTL1A6NKG5 1358 aa26.2■■□□□ 1.79
PLXNA3-206ENST00000491066 SHANK3Q9BYB0 1731 aa26.2■■□□□ 1.79
PLXNA3-206ENST00000491066 HMGB2P26583 209 aaKnown RBP26.2■■□□□ 1.78
PLXNA3-206ENST00000491066 ST20-MTHFSA0A0A6YYL1 179 aa26.18■■□□□ 1.78
PLXNA3-206ENST00000491066 RGPD2P0DJD1 1756 aa26.18■■□□□ 1.78
PLXNA3-206ENST00000491066 RAPGEF4Q8WZA2 1011 aa26.17■■□□□ 1.78
PLXNA3-206ENST00000491066 TONSLQ96HA7 1378 aa26.17■■□□□ 1.78
PLXNA3-206ENST00000491066 RRS1Q15050 365 aaKnown RBP26.16■■□□□ 1.78
PLXNA3-206ENST00000491066 FYB1O15117 783 aa26.15■■□□□ 1.78
PLXNA3-206ENST00000491066 FLAD1Q8NFF5 587 aa26.15■■□□□ 1.78
PLXNA3-206ENST00000491066 CD2APQ9Y5K6 639 aa26.15■■□□□ 1.78
PLXNA3-206ENST00000491066 TATP17735 454 aaPredicted RBP26.14■■□□□ 1.78
PLXNA3-206ENST00000491066 MSL1Q68DK7 614 aa26.14■■□□□ 1.78
PLXNA3-206ENST00000491066 USHBP1Q8N6Y0 703 aa26.14■■□□□ 1.78
PLXNA3-206ENST00000491066 SMG6Q86US8 1419 aaKnown RBP26.12■■□□□ 1.77
PLXNA3-206ENST00000491066 CEP350Q5VT06 3117 aa26.11■■□□□ 1.77
PLXNA3-206ENST00000491066 GGNBP2Q9H3C7 697 aa26.11■■□□□ 1.77
PLXNA3-206ENST00000491066 PCDH11XQ9BZA7 1347 aa26.11■■□□□ 1.77
PLXNA3-206ENST00000491066 PCDH11YQ9BZA8 1340 aa26.11■■□□□ 1.77
PLXNA3-206ENST00000491066 INSRP06213 1382 aa26.09■■□□□ 1.77
PLXNA3-206ENST00000491066 HSP90AB2PQ58FF8 381 aa26.09■■□□□ 1.77
PLXNA3-206ENST00000491066 PALLDQ8WX93 1383 aa26.08■■□□□ 1.77
PLXNA3-206ENST00000491066 ATP10DQ9P241 1426 aa26.07■■□□□ 1.76
PLXNA3-206ENST00000491066 C5P01031 1676 aa26.07■■□□□ 1.76
PLXNA3-206ENST00000491066 IFFO2Q5TF58 517 aa26.07■■□□□ 1.76
PLXNA3-206ENST00000491066 MPRIPQ6WCQ1 1025 aa26.07■■□□□ 1.76
PLXNA3-206ENST00000491066 SMARCC1Q92922 1105 aaPredicted RBP26.06■■□□□ 1.76
PLXNA3-206ENST00000491066 KIF24Q5T7B8 1368 aa26.06■■□□□ 1.76
PLXNA3-206ENST00000491066 CYP27B1O15528 508 aa26.05■■□□□ 1.76
PLXNA3-206ENST00000491066 FLT4P35916 1363 aa26.04■■□□□ 1.76
PLXNA3-206ENST00000491066 TMF1P82094 1093 aa26.03■■□□□ 1.76
PLXNA3-206ENST00000491066 GPBP1L1Q9HC44 474 aaPredicted RBP26.03■■□□□ 1.76
PLXNA3-206ENST00000491066 AK7Q96M32 723 aa26.02■■□□□ 1.76
PLXNA3-206ENST00000491066 TAF1LQ8IZX4 1826 aa26.02■■□□□ 1.76
PLXNA3-206ENST00000491066 ADCY9O60503 1353 aa26■■□□□ 1.75
PLXNA3-206ENST00000491066 AMIGO3Q86WK7 504 aa26■■□□□ 1.75
PLXNA3-206ENST00000491066 NKX1-1Q15270 411 aaPredicted RBP25.99■■□□□ 1.75
PLXNA3-206ENST00000491066 PIGBQ92521 554 aa25.99■■□□□ 1.75
PLXNA3-206ENST00000491066 C4BP0C0L5 1744 aa25.99■■□□□ 1.75
PLXNA3-206ENST00000491066 NSD3Q9BZ95 1437 aa25.97■■□□□ 1.75
PLXNA3-206ENST00000491066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.97■■□□□ 1.75
PLXNA3-206ENST00000491066 SSFA2P28290 1259 aa25.96■■□□□ 1.75
PLXNA3-206ENST00000491066 CDCA8Q53HL2 280 aa25.96■■□□□ 1.75
PLXNA3-206ENST00000491066 IGSF1Q8N6C5 1336 aa25.95■■□□□ 1.75
PLXNA3-206ENST00000491066 PHF14O94880 888 aa25.95■■□□□ 1.74
PLXNA3-206ENST00000491066 TOGARAM1Q9Y4F4 1720 aa25.94■■□□□ 1.74
PLXNA3-206ENST00000491066 LOC102724428A0A0B4J2F2 783 aa25.94■■□□□ 1.74
PLXNA3-206ENST00000491066 HSPA6P17066 643 aa25.94■■□□□ 1.74
PLXNA3-206ENST00000491066 SIK1P57059 783 aa25.94■■□□□ 1.74
PLXNA3-206ENST00000491066 SMIM5Q71RC9 77 aa25.94■■□□□ 1.74
PLXNA3-206ENST00000491066 SPG7Q9UQ90 795 aa25.94■■□□□ 1.74
PLXNA3-206ENST00000491066 ITGB4P16144 1822 aa25.93■■□□□ 1.74
PLXNA3-206ENST00000491066 ZNF526Q8TF50 670 aaPredicted RBP25.93■■□□□ 1.74
PLXNA3-206ENST00000491066 CARD14Q9BXL6 1004 aa25.93■■□□□ 1.74
PLXNA3-206ENST00000491066 EMILIN1Q9Y6C2 1016 aa25.93■■□□□ 1.74
PLXNA3-206ENST00000491066 NCAPD2Q15021 1401 aa25.93■■□□□ 1.74
PLXNA3-206ENST00000491066 LINC00116Q8NCU8 138 aa25.92■■□□□ 1.74
PLXNA3-206ENST00000491066 UBR3Q6ZT12 1888 aa25.91■■□□□ 1.74
PLXNA3-206ENST00000491066 PKD1L3Q7Z443 1732 aa25.91■■□□□ 1.74
PLXNA3-206ENST00000491066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.91■■□□□ 1.746e-6■□□□□ 8.9
PLXNA3-206ENST00000491066 KIF20BQ96Q89 1820 aa25.91■■□□□ 1.74
PLXNA3-206ENST00000491066 TMOD3Q9NYL9 352 aa25.89■■□□□ 1.74
PLXNA3-206ENST00000491066 WASHC2AQ641Q2 1341 aa25.88■■□□□ 1.73
PLXNA3-206ENST00000491066 MAP2P11137 1827 aaKnown RBP25.88■■□□□ 1.73
PLXNA3-206ENST00000491066 WWC3Q9ULE0 1092 aa25.88■■□□□ 1.73
PLXNA3-206ENST00000491066 ASAP1Q9ULH1 1129 aa25.88■■□□□ 1.73
PLXNA3-206ENST00000491066 PPM1GO15355 546 aaPredicted RBP25.87■■□□□ 1.73
PLXNA3-206ENST00000491066 EYA1Q99502 592 aa25.87■■□□□ 1.73
PLXNA3-206ENST00000491066 ITPK1Q13572 414 aa25.86■■□□□ 1.73
PLXNA3-206ENST00000491066 GNPATO15228 680 aa25.85■■□□□ 1.73
PLXNA3-206ENST00000491066 ATP6V1AP38606 617 aa25.85■■□□□ 1.73
PLXNA3-206ENST00000491066 IFNL2Q8IZJ0 200 aa25.85■■□□□ 1.73
PLXNA3-206ENST00000491066 KIF3CO14782 793 aa25.84■■□□□ 1.73
PLXNA3-206ENST00000491066 PHKG2P15735 406 aa25.84■■□□□ 1.73
PLXNA3-206ENST00000491066 ATG3Q9NT62 314 aa25.83■■□□□ 1.73
PLXNA3-206ENST00000491066 MMP10P09238 476 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms