RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 HDGFL2Q7Z4V5 671 aaPredicted RBP21.85■■□□□ 1.09
SCAMP3-208ENST00000490999 ANKRD36BQ8N2N9 1353 aa21.85■■□□□ 1.09
SCAMP3-208ENST00000490999 FAM208AQ9UK61 1670 aaKnown RBP21.84■■□□□ 1.09
SCAMP3-208ENST00000490999 MEGF6O75095 1541 aa21.84■■□□□ 1.09
SCAMP3-208ENST00000490999 KAT6BQ8WYB5 2073 aa21.83■■□□□ 1.08
SCAMP3-208ENST00000490999 MSH5O43196 834 aa21.82■■□□□ 1.08
SCAMP3-208ENST00000490999 MSL1Q68DK7 614 aa21.82■■□□□ 1.08
SCAMP3-208ENST00000490999 LY75O60449 1722 aa21.81■■□□□ 1.08
SCAMP3-208ENST00000490999 IP6K1Q92551 441 aa21.81■■□□□ 1.08
SCAMP3-208ENST00000490999 CCNL1Q9UK58 526 aaPredicted RBP21.81■■□□□ 1.08
SCAMP3-208ENST00000490999 CARD11Q9BXL7 1154 aa21.8■■□□□ 1.08
SCAMP3-208ENST00000490999 FBLN1P23142 703 aa21.79■■□□□ 1.08
SCAMP3-208ENST00000490999 ATP10DQ9P241 1426 aa21.79■■□□□ 1.08
SCAMP3-208ENST00000490999 MAP3K19Q56UN5 1328 aa21.79■■□□□ 1.08
SCAMP3-208ENST00000490999 COL23A1Q86Y22 540 aaPredicted RBP21.77■■□□□ 1.08
SCAMP3-208ENST00000490999 TERF2IPQ9NYB0 399 aa21.77■■□□□ 1.08
SCAMP3-208ENST00000490999 HOXC9P31274 260 aa21.76■■□□□ 1.07
SCAMP3-208ENST00000490999 IFFO2Q5TF58 517 aa21.76■■□□□ 1.07
SCAMP3-208ENST00000490999 RGPD2P0DJD1 1756 aa21.76■■□□□ 1.07
SCAMP3-208ENST00000490999 USHBP1Q8N6Y0 703 aa21.75■■□□□ 1.07
SCAMP3-208ENST00000490999 USP47Q96K76 1375 aa21.74■■□□□ 1.07
SCAMP3-208ENST00000490999 ZCRB1Q8TBF4 217 aaKnown RBP21.74■■□□□ 1.07
SCAMP3-208ENST00000490999 AMPHP49418 695 aa21.73■■□□□ 1.07
SCAMP3-208ENST00000490999 GRIN3BO60391 1043 aa21.72■■□□□ 1.07
SCAMP3-208ENST00000490999 COG3Q96JB2 828 aa21.72■■□□□ 1.07
SCAMP3-208ENST00000490999 C5P01031 1676 aa21.72■■□□□ 1.07
SCAMP3-208ENST00000490999 ZNF526Q8TF50 670 aaPredicted RBP21.71■■□□□ 1.07
SCAMP3-208ENST00000490999 WWC3Q9ULE0 1092 aa21.71■■□□□ 1.07
SCAMP3-208ENST00000490999 RRS1Q15050 365 aaKnown RBP21.69■■□□□ 1.06
SCAMP3-208ENST00000490999 NBPF6Q5VWK0 638 aa21.68■■□□□ 1.06
SCAMP3-208ENST00000490999 NBPF4Q96M43 638 aa21.68■■□□□ 1.06
SCAMP3-208ENST00000490999 RTL1A6NKG5 1358 aa21.68■■□□□ 1.06
SCAMP3-208ENST00000490999 ADCY9O60503 1353 aa21.67■■□□□ 1.06
SCAMP3-208ENST00000490999 PALLDQ8WX93 1383 aa21.67■■□□□ 1.06
SCAMP3-208ENST00000490999 GPBP1L1Q9HC44 474 aaPredicted RBP21.66■■□□□ 1.06
SCAMP3-208ENST00000490999 SMIM5Q71RC9 77 aa21.65■■□□□ 1.06
SCAMP3-208ENST00000490999 AMIGO3Q86WK7 504 aa21.65■■□□□ 1.06
SCAMP3-208ENST00000490999 TOGARAM1Q9Y4F4 1720 aa21.65■■□□□ 1.06
SCAMP3-208ENST00000490999 SMG6Q86US8 1419 aaKnown RBP21.64■■□□□ 1.06
SCAMP3-208ENST00000490999 RAPGEF4Q8WZA2 1011 aa21.63■■□□□ 1.05
SCAMP3-208ENST00000490999 TESK2Q96S53 571 aa21.63■■□□□ 1.05
SCAMP3-208ENST00000490999 CD2APQ9Y5K6 639 aa21.63■■□□□ 1.05
SCAMP3-208ENST00000490999 C4BP0C0L5 1744 aa21.63■■□□□ 1.05
SCAMP3-208ENST00000490999 PHF14O94880 888 aa21.62■■□□□ 1.05
SCAMP3-208ENST00000490999 MPRIPQ6WCQ1 1025 aa21.62■■□□□ 1.05
SCAMP3-208ENST00000490999 GGNBP2Q9H3C7 697 aa21.62■■□□□ 1.05
SCAMP3-208ENST00000490999 PCDH11XQ9BZA7 1347 aa21.61■■□□□ 1.05
SCAMP3-208ENST00000490999 PCDH11YQ9BZA8 1340 aa21.61■■□□□ 1.05
SCAMP3-208ENST00000490999 IGSF1Q8N6C5 1336 aa21.6■■□□□ 1.05
SCAMP3-208ENST00000490999 TATP17735 454 aaPredicted RBP21.6■■□□□ 1.05
SCAMP3-208ENST00000490999 PUS7Q96PZ0 661 aaKnown RBP21.6■■□□□ 1.05
SCAMP3-208ENST00000490999 TONSLQ96HA7 1378 aa21.6■■□□□ 1.05
SCAMP3-208ENST00000490999 TAF1LQ8IZX4 1826 aa21.59■■□□□ 1.05
SCAMP3-208ENST00000490999 CGNL1Q0VF96 1302 aa21.59■■□□□ 1.05
SCAMP3-208ENST00000490999 ST20-MTHFSA0A0A6YYL1 179 aa21.59■■□□□ 1.05
SCAMP3-208ENST00000490999 AK7Q96M32 723 aa21.59■■□□□ 1.05
SCAMP3-208ENST00000490999 HSPA6P17066 643 aa21.58■■□□□ 1.05
SCAMP3-208ENST00000490999 HSP90AB2PQ58FF8 381 aa21.58■■□□□ 1.05
SCAMP3-208ENST00000490999 CYP27B1O15528 508 aa21.57■■□□□ 1.04
SCAMP3-208ENST00000490999 FLAD1Q8NFF5 587 aa21.56■■□□□ 1.04
SCAMP3-208ENST00000490999 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.55■■□□□ 1.04
SCAMP3-208ENST00000490999 FYB1O15117 783 aa21.55■■□□□ 1.04
SCAMP3-208ENST00000490999 INSRP06213 1382 aa21.54■■□□□ 1.04
SCAMP3-208ENST00000490999 FLT4P35916 1363 aa21.54■■□□□ 1.04
SCAMP3-208ENST00000490999 UBR3Q6ZT12 1888 aa21.54■■□□□ 1.04
SCAMP3-208ENST00000490999 PKD1L3Q7Z443 1732 aa21.52■■□□□ 1.04
SCAMP3-208ENST00000490999 LINC00116Q8NCU8 138 aa21.52■■□□□ 1.04
SCAMP3-208ENST00000490999 ITGB4P16144 1822 aa21.51■■□□□ 1.03
SCAMP3-208ENST00000490999 KIF20BQ96Q89 1820 aa21.51■■□□□ 1.03
SCAMP3-208ENST00000490999 PIGBQ92521 554 aa21.51■■□□□ 1.03
SCAMP3-208ENST00000490999 NSD3Q9BZ95 1437 aa21.5■■□□□ 1.03
SCAMP3-208ENST00000490999 EMILIN1Q9Y6C2 1016 aa21.5■■□□□ 1.03
SCAMP3-208ENST00000490999 CICQ96RK0 1608 aaPredicted RBP21.5■■□□□ 1.03
SCAMP3-208ENST00000490999 KIF3CO14782 793 aa21.49■■□□□ 1.03
SCAMP3-208ENST00000490999 SMARCC1Q92922 1105 aaPredicted RBP21.49■■□□□ 1.03
SCAMP3-208ENST00000490999 PXDNLA1KZ92 1463 aa21.47■■□□□ 1.03
SCAMP3-208ENST00000490999 LOC102724428A0A0B4J2F2 783 aa21.47■■□□□ 1.03
SCAMP3-208ENST00000490999 GNPATO15228 680 aa21.47■■□□□ 1.03
SCAMP3-208ENST00000490999 SSFA2P28290 1259 aa21.47■■□□□ 1.03
SCAMP3-208ENST00000490999 SIK1P57059 783 aa21.47■■□□□ 1.03
SCAMP3-208ENST00000490999 MAP2P11137 1827 aaKnown RBP21.47■■□□□ 1.03
SCAMP3-208ENST00000490999 ITPK1Q13572 414 aa21.46■■□□□ 1.03
SCAMP3-208ENST00000490999 NCAPD2Q15021 1401 aa21.45■■□□□ 1.02
SCAMP3-208ENST00000490999 PPM1GO15355 546 aaPredicted RBP21.44■■□□□ 1.02
SCAMP3-208ENST00000490999 MMP10P09238 476 aa21.44■■□□□ 1.02
SCAMP3-208ENST00000490999 ASAP1Q9ULH1 1129 aa21.44■■□□□ 1.02
SCAMP3-208ENST00000490999 KIF24Q5T7B8 1368 aa21.44■■□□□ 1.02
SCAMP3-208ENST00000490999 KIAA1551Q9HCM1 1747 aa21.43■■□□□ 1.02
SCAMP3-208ENST00000490999 TMOD3Q9NYL9 352 aa21.43■■□□□ 1.02
SCAMP3-208ENST00000490999 HMGB2P26583 209 aaKnown RBP21.42■■□□□ 1.02
SCAMP3-208ENST00000490999 TMF1P82094 1093 aa21.42■■□□□ 1.02
SCAMP3-208ENST00000490999 ATP6V1AP38606 617 aa21.41■■□□□ 1.02
SCAMP3-208ENST00000490999 NKX1-1Q15270 411 aaPredicted RBP21.4■■□□□ 1.02
SCAMP3-208ENST00000490999 SPG7Q9UQ90 795 aa21.4■■□□□ 1.02
SCAMP3-208ENST00000490999 BCS1LQ9Y276 419 aa21.4■■□□□ 1.02
SCAMP3-208ENST00000490999 ANKRD26Q9UPS8 1709 aa21.4■■□□□ 1.02
SCAMP3-208ENST00000490999 C10orf71Q711Q0 1435 aa21.39■■□□□ 1.02
SCAMP3-208ENST00000490999 N4BP2Q86UW6 1770 aaPredicted RBP21.39■■□□□ 1.01
SCAMP3-208ENST00000490999 KDRP35968 1356 aa21.38■■□□□ 1.01
SCAMP3-208ENST00000490999 A0A0G2JLW4 131 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms