RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 DMRT2Q9Y5R5 561 aa9□□□□□ -0.97
NPHP3-208ENST00000490993 FAM83GA6ND36 823 aa9□□□□□ -0.97
NPHP3-208ENST00000490993 FGD1P98174 961 aa9□□□□□ -0.97
NPHP3-208ENST00000490993 LRRCC1Q9C099 1032 aa9□□□□□ -0.97
NPHP3-208ENST00000490993 MSH5O43196 834 aa9□□□□□ -0.97
NPHP3-208ENST00000490993 KRT28Q7Z3Y7 464 aa9□□□□□ -0.97
NPHP3-208ENST00000490993 NCKAP5LQ9HCH0 1330 aa8.99□□□□□ -0.97
NPHP3-208ENST00000490993 MYO3AQ8NEV4 1616 aa8.99□□□□□ -0.97
NPHP3-208ENST00000490993 PTPRMP28827 1452 aa8.99□□□□□ -0.97
NPHP3-208ENST00000490993 CDK12Q9NYV4 1490 aaPredicted RBP8.99□□□□□ -0.97
NPHP3-208ENST00000490993 MAP3K19Q56UN5 1328 aa8.99□□□□□ -0.97
NPHP3-208ENST00000490993 DIAPH3Q9NSV4 1193 aa8.99□□□□□ -0.97
NPHP3-208ENST00000490993 NUCB1Q02818 461 aa8.99□□□□□ -0.97
NPHP3-208ENST00000490993 GSE1Q14687 1217 aa8.99□□□□□ -0.97
NPHP3-208ENST00000490993 RABEP1Q15276 862 aa8.99□□□□□ -0.97
NPHP3-208ENST00000490993 AEBP1Q8IUX7 1158 aa8.99□□□□□ -0.97
NPHP3-208ENST00000490993 ROBO2Q9HCK4 1378 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 RLBP1P12271 317 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 CHMP3Q9Y3E7 222 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 REREQ9P2R6 1566 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 FOXO3O43524 673 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 NFKBIBQ15653 356 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 CADPS2Q86UW7 1296 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 C8orf58Q8NAV2 365 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 ZBTB40Q9NUA8 1239 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 MIS18AQ9NYP9 233 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 SURF6O75683 361 aaKnown RBP8.98□□□□□ -0.97
NPHP3-208ENST00000490993 HOXC9P31274 260 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 BMP2KLQ5H9B9 411 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 TAF7LQ5H9L4 462 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 SPATA31D1Q6ZQQ2 1576 aa8.98□□□□□ -0.97
NPHP3-208ENST00000490993 KIF24Q5T7B8 1368 aa8.97□□□□□ -0.97
NPHP3-208ENST00000490993 RAB11FIP3O75154 756 aa8.97□□□□□ -0.97
NPHP3-208ENST00000490993 MTHFSDQ2M296 383 aaKnown RBP8.97□□□□□ -0.97
NPHP3-208ENST00000490993 CNTROBQ8N137 903 aa8.97□□□□□ -0.97
NPHP3-208ENST00000490993 LRRFIP1Q32MZ4 808 aaKnown RBP8.97□□□□□ -0.97
NPHP3-208ENST00000490993 CLASRPQ8N2M8 674 aaKnown RBP8.97□□□□□ -0.97
NPHP3-208ENST00000490993 IP6K1Q92551 441 aa8.97□□□□□ -0.97
NPHP3-208ENST00000490993 RICTORQ6R327 1708 aa8.97□□□□□ -0.97
NPHP3-208ENST00000490993 GORABQ5T7V8 394 aa8.97□□□□□ -0.97
NPHP3-208ENST00000490993 USP6P35125 1406 aa8.97□□□□□ -0.97
NPHP3-208ENST00000490993 MAP3K5Q99683 1374 aa8.97□□□□□ -0.97
NPHP3-208ENST00000490993 MCM2P49736 904 aa8.97□□□□□ -0.97
NPHP3-208ENST00000490993 NUCB2P80303 420 aa8.97□□□□□ -0.97
NPHP3-208ENST00000490993 FLIIQ13045 1269 aa8.97□□□□□ -0.97
NPHP3-208ENST00000490993 EYA1Q99502 592 aa8.97□□□□□ -0.97
NPHP3-208ENST00000490993 ZNF330Q9Y3S2 320 aaPredicted RBP8.97□□□□□ -0.97
NPHP3-208ENST00000490993 KIAA0232Q92628 1395 aa8.96□□□□□ -0.97
NPHP3-208ENST00000490993 GOLGA6L3A6NEY3 463 aa8.96□□□□□ -0.97
NPHP3-208ENST00000490993 XPCQ01831 940 aaPredicted RBP8.96□□□□□ -0.97
NPHP3-208ENST00000490993 C8orf34Q49A92 452 aa8.96□□□□□ -0.97
NPHP3-208ENST00000490993 SMC5Q8IY18 1101 aa8.96□□□□□ -0.97
NPHP3-208ENST00000490993 SYAP1Q96A49 352 aaPredicted RBP8.96□□□□□ -0.97
NPHP3-208ENST00000490993 CHMP4CQ96CF2 233 aa8.96□□□□□ -0.97
NPHP3-208ENST00000490993 C19orf44Q9H6X5 657 aa8.96□□□□□ -0.97
NPHP3-208ENST00000490993 ANKARQ7Z5J8 1434 aa8.96□□□□□ -0.97
NPHP3-208ENST00000490993 BRPF1P55201 1214 aaPredicted RBP8.96□□□□□ -0.97
NPHP3-208ENST00000490993 CABP4P57796 275 aa8.96□□□□□ -0.97
NPHP3-208ENST00000490993 CSPP1Q1MSJ5 1256 aa8.96□□□□□ -0.97
NPHP3-208ENST00000490993 TMEM131LA2VDJ0 1609 aa8.96□□□□□ -0.98
NPHP3-208ENST00000490993 HIP1O00291 1037 aa8.96□□□□□ -0.98
NPHP3-208ENST00000490993 CHL1O00533 1208 aa8.96□□□□□ -0.98
NPHP3-208ENST00000490993 AKAP4Q5JQC9 854 aa8.96□□□□□ -0.98
NPHP3-208ENST00000490993 SKAP1Q86WV1 359 aa8.96□□□□□ -0.98
NPHP3-208ENST00000490993 PHF23Q9BUL5 403 aaPredicted RBP8.96□□□□□ -0.98
NPHP3-208ENST00000490993 ANO2Q9NQ90 1003 aa8.96□□□□□ -0.98
NPHP3-208ENST00000490993 PNPLA6Q8IY17 1366 aa8.96□□□□□ -0.98
NPHP3-208ENST00000490993 AIMP1Q12904 312 aaKnown RBP8.95□□□□□ -0.98
NPHP3-208ENST00000490993 USHBP1Q8N6Y0 703 aa8.95□□□□□ -0.98
NPHP3-208ENST00000490993 ANKRD24Q8TF21 1146 aa8.95□□□□□ -0.98
NPHP3-208ENST00000490993 DBF4Q9UBU7 674 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-208ENST00000490993 USP32Q8NFA0 1604 aa8.95□□□□□ -0.98
NPHP3-208ENST00000490993 ZKSCAN1P17029 563 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-208ENST00000490993 ZC3H6P61129 1189 aaKnown RBP8.95□□□□□ -0.98
NPHP3-208ENST00000490993 HYPKQ9NX55 129 aa8.95□□□□□ -0.98
NPHP3-208ENST00000490993 TSPYL6Q8N831 410 aa8.95□□□□□ -0.98
NPHP3-208ENST00000490993 ANKRD44Q8N8A2 993 aa8.95□□□□□ -0.98
NPHP3-208ENST00000490993 RNF20Q5VTR2 975 aa8.94□□□□□ -0.98
NPHP3-208ENST00000490993 PRDM11Q9NQV5 511 aa8.94□□□□□ -0.98
NPHP3-208ENST00000490993 NPHP3Q7Z494 1330 aa8.94□□□□□ -0.98
NPHP3-208ENST00000490993 MSH6P52701 1360 aa8.94□□□□□ -0.98
NPHP3-208ENST00000490993 TOM1L2Q6ZVM7 507 aa8.94□□□□□ -0.98
NPHP3-208ENST00000490993 CIZ1Q9ULV3 898 aaPredicted RBP8.94□□□□□ -0.98
NPHP3-208ENST00000490993 TNNQ9UQP3 1299 aa8.94□□□□□ -0.98
NPHP3-208ENST00000490993 TBC1D32Q96NH3 1257 aa8.94□□□□□ -0.98
NPHP3-208ENST00000490993 PRR36Q9H6K5 1346 aa8.94□□□□□ -0.98
NPHP3-208ENST00000490993 ZBTB7BO15156 539 aaPredicted RBP8.94□□□□□ -0.98
NPHP3-208ENST00000490993 IL27Q8NEV9 243 aa8.94□□□□□ -0.98
NPHP3-208ENST00000490993 DNAAF4Q8WXU2 420 aa8.94□□□□□ -0.98
NPHP3-208ENST00000490993 FOXD4L1Q9NU39 408 aa8.94□□□□□ -0.98
NPHP3-208ENST00000490993 ATP6V1DQ9Y5K8 247 aa8.93□□□□□ -0.98
NPHP3-208ENST00000490993 RTL1A6NKG5 1358 aa8.93□□□□□ -0.98
NPHP3-208ENST00000490993 CPSF1Q10570 1443 aaKnown RBP8.93□□□□□ -0.98
NPHP3-208ENST00000490993 GOLGA6L4A6NEF3 574 aa8.93□□□□□ -0.98
NPHP3-208ENST00000490993 SRGAP3O43295 1099 aa8.93□□□□□ -0.98
NPHP3-208ENST00000490993 KIF1BPQ96EK5 621 aa8.93□□□□□ -0.98
NPHP3-208ENST00000490993 LARP1Q6PKG0 1096 aaKnown RBP8.93□□□□□ -0.98
NPHP3-208ENST00000490993 CWC22Q9HCG8 908 aaKnown RBP8.93□□□□□ -0.98
NPHP3-208ENST00000490993 K7ELQ4 463 aaPredicted RBP8.92□□□□□ -0.98
NPHP3-208ENST00000490993 HOXB7P09629 217 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms