RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 IQGAP2Q13576 1575 aa13.38□□□□□ -0.27
CRNKL1-204ENST00000490910 IL16Q14005 1332 aa13.38□□□□□ -0.27
CRNKL1-204ENST00000490910 CCDC171Q6TFL3 1326 aa13.38□□□□□ -0.27
CRNKL1-204ENST00000490910 HDAC5Q9UQL6 1122 aa13.38□□□□□ -0.27
CRNKL1-204ENST00000490910 CTTNBP2Q8WZ74 1663 aa13.38□□□□□ -0.27
CRNKL1-204ENST00000490910 CD2BP2O95400 341 aaKnown RBP13.37□□□□□ -0.27
CRNKL1-204ENST00000490910 PSMA5P28066 241 aa13.37□□□□□ -0.27
CRNKL1-204ENST00000490910 PDLIM2Q96JY6 352 aa13.37□□□□□ -0.27
CRNKL1-204ENST00000490910 ZSCAN31Q96LW9 406 aaPredicted RBP13.37□□□□□ -0.27
CRNKL1-204ENST00000490910 SRCIN1Q9C0H9 1055 aa13.37□□□□□ -0.27
CRNKL1-204ENST00000490910 NUP160Q12769 1436 aa13.37□□□□□ -0.27
CRNKL1-204ENST00000490910 VGFO15240 615 aaPredicted RBP13.37□□□□□ -0.27
CRNKL1-204ENST00000490910 FCHSD2O94868 740 aa13.37□□□□□ -0.27
CRNKL1-204ENST00000490910 ZNF165P49910 485 aa13.37□□□□□ -0.27
CRNKL1-204ENST00000490910 PKP1Q13835 747 aa13.37□□□□□ -0.27
CRNKL1-204ENST00000490910 PRDM4Q9UKN5 801 aa13.37□□□□□ -0.27
CRNKL1-204ENST00000490910 ZSCAN22P10073 491 aaPredicted RBP13.36□□□□□ -0.27
CRNKL1-204ENST00000490910 CCDC83Q8IWF9 413 aa13.36□□□□□ -0.27
CRNKL1-204ENST00000490910 TXLNBQ8N3L3 684 aa13.36□□□□□ -0.27
CRNKL1-204ENST00000490910 THUMPD2Q9BTF0 503 aaKnown RBP13.36□□□□□ -0.27
CRNKL1-204ENST00000490910 NPC1L1Q9UHC9 1359 aa13.36□□□□□ -0.27
CRNKL1-204ENST00000490910 TPM1P09493 284 aa13.36□□□□□ -0.27
CRNKL1-204ENST00000490910 DNMT1P26358 1616 aaKnown RBP13.36□□□□□ -0.27
CRNKL1-204ENST00000490910 CEP57L1Q8IYX8 460 aa13.36□□□□□ -0.27
CRNKL1-204ENST00000490910 EXOC6BQ9Y2D4 811 aa13.36□□□□□ -0.27
CRNKL1-204ENST00000490910 CEBPZQ03701 1054 aaKnown RBP13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 INTS4Q96HW7 963 aaKnown RBP13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 SCAND2PQ9GZW5 306 aaPredicted RBP13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 ESF1Q9H501 851 aaKnown RBP13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 PPP6R1Q9UPN7 881 aa13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 LIMCH1Q9UPQ0 1083 aa13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 SURF6O75683 361 aaKnown RBP13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 PLEKHM2Q8IWE5 1019 aa13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 ARHGAP45Q92619 1136 aa13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 SLU7O95391 586 aaKnown RBP13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 IFIT2P09913 472 aaKnown RBP13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 TAF7LQ5H9L4 462 aa13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 CHMP4CQ96CF2 233 aa13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 PDRG1Q9NUG6 133 aa13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 FOSBP53539 338 aa13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 DDX19AQ9NUU7 478 aaKnown RBP13.35□□□□□ -0.27
CRNKL1-204ENST00000490910 EIF3JO75822 258 aaKnown RBP13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 SFPQP23246 707 aaKnown RBP eCLIP13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 FAM177A1Q8N128 213 aaPredicted RBP13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 CCDC34Q96HJ3 373 aa13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 UNC13AQ9UPW8 1703 aa13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 UBTFL1P0CB47 393 aaPredicted RBP13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 NFE2L2Q16236 605 aa13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 HSP90AB4PQ58FF6 505 aa13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 C16orf71Q8IYS4 520 aaPredicted RBP13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 COG3Q96JB2 828 aa13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 SLC4A2P04920 1241 aa13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 C14orf37Q86TY3 774 aa13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 IPO4Q8TEX9 1081 aaKnown RBP13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 JAKMIP1Q96N16 626 aaKnown RBP13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 ZNF692Q9BU19 519 aaPredicted RBP13.34□□□□□ -0.27
CRNKL1-204ENST00000490910 URI1O94763 535 aaPredicted RBP13.33□□□□□ -0.27
CRNKL1-204ENST00000490910 CASTP20810 708 aaKnown RBP13.33□□□□□ -0.27
CRNKL1-204ENST00000490910 GTF2A1P52655 376 aaPredicted RBP13.33□□□□□ -0.27
CRNKL1-204ENST00000490910 SNW1Q13573 536 aaKnown RBP13.33□□□□□ -0.27
CRNKL1-204ENST00000490910 CCT4P50991 539 aaKnown RBP13.33□□□□□ -0.28
CRNKL1-204ENST00000490910 ANAPC15P60006 121 aa13.33□□□□□ -0.28
CRNKL1-204ENST00000490910 PDILTQ8N807 584 aa13.33□□□□□ -0.28
CRNKL1-204ENST00000490910 NECTIN2Q92692 538 aa13.33□□□□□ -0.28
CRNKL1-204ENST00000490910 ERCC4Q92889 916 aaPredicted RBP13.33□□□□□ -0.28
CRNKL1-204ENST00000490910 SKILP12757 684 aa13.33□□□□□ -0.28
CRNKL1-204ENST00000490910 PTPRGP23470 1445 aa13.33□□□□□ -0.28
CRNKL1-204ENST00000490910 DENND4BO75064 1496 aaPredicted RBP13.33□□□□□ -0.28
CRNKL1-204ENST00000490910 CREBRFQ8IUR6 639 aa13.32□□□□□ -0.28
CRNKL1-204ENST00000490910 H0YHG0 523 aa13.32□□□□□ -0.28
CRNKL1-204ENST00000490910 MAP4K4O95819 1239 aaPredicted RBP13.32□□□□□ -0.28
CRNKL1-204ENST00000490910 ZSCAN20P17040 1043 aaPredicted RBP13.32□□□□□ -0.28
CRNKL1-204ENST00000490910 LARP6Q9BRS8 491 aaKnown RBP13.32□□□□□ -0.28
CRNKL1-204ENST00000490910 TSPYL4Q9UJ04 414 aa13.32□□□□□ -0.28
CRNKL1-204ENST00000490910 ERLIN1O75477 346 aa13.32□□□□□ -0.28
CRNKL1-204ENST00000490910 ATP2B3Q16720 1220 aa13.32□□□□□ -0.28
CRNKL1-204ENST00000490910 CARD14Q9BXL6 1004 aa13.32□□□□□ -0.28
CRNKL1-204ENST00000490910 CAVIN2O95810 425 aa13.32□□□□□ -0.28
CRNKL1-204ENST00000490910 SKIDA1Q1XH10 827 aa13.32□□□□□ -0.28
CRNKL1-204ENST00000490910 ANO6Q4KMQ2 910 aa13.32□□□□□ -0.28
CRNKL1-204ENST00000490910 RASSF4Q9H2L5 321 aa13.32□□□□□ -0.28
CRNKL1-204ENST00000490910 GADD45BO75293 160 aaPredicted RBP13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 GSDMDP57764 484 aa13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 SH2B1Q9NRF2 756 aaPredicted RBP13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 CFAP45Q9UL16 551 aa13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 MBD5Q9P267 1494 aa13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 LMAN1P49257 510 aa13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 ANKRD1Q15327 319 aa13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 CHAMP1Q96JM3 812 aa13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 DCTPP1Q9H773 170 aa13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 EIF2AK4Q9P2K8 1649 aaKnown RBP13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 ARHGAP5Q13017 1502 aa13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 BRD1O95696 1058 aa13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 TYRO3Q06418 890 aa13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 NOC3LQ8WTT2 800 aaKnown RBP13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 ERO1AQ96HE7 468 aa13.31□□□□□ -0.28
CRNKL1-204ENST00000490910 KIF21AQ7Z4S6 1674 aa13.3□□□□□ -0.28
CRNKL1-204ENST00000490910 ZBTB7BO15156 539 aaPredicted RBP13.3□□□□□ -0.28
CRNKL1-204ENST00000490910 F13A1P00488 732 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms