RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 IP6K1Q92551 441 aa11.96□□□□□ -0.49
PCOLCE-209ENST00000490909 AKT1S1Q96B36 256 aa11.96□□□□□ -0.49
PCOLCE-209ENST00000490909 HOXC9P31274 260 aa11.95□□□□□ -0.5
PCOLCE-209ENST00000490909 TERF2IPQ9NYB0 399 aa11.95□□□□□ -0.5
PCOLCE-209ENST00000490909 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
PCOLCE-209ENST00000490909 UBR3Q6ZT12 1888 aa11.94□□□□□ -0.5
PCOLCE-209ENST00000490909 ST20-MTHFSA0A0A6YYL1 179 aa11.94□□□□□ -0.5
PCOLCE-209ENST00000490909 KCNQ4P56696 695 aa11.94□□□□□ -0.5
PCOLCE-209ENST00000490909 ZNF784Q8NCA9 323 aaPredicted RBP11.94□□□□□ -0.5
PCOLCE-209ENST00000490909 LTV1Q96GA3 475 aaPredicted RBP11.94□□□□□ -0.5
PCOLCE-209ENST00000490909 PUS7Q96PZ0 661 aaKnown RBP11.94□□□□□ -0.5
PCOLCE-209ENST00000490909 MAP2P11137 1827 aaKnown RBP11.94□□□□□ -0.5
PCOLCE-209ENST00000490909 CEP350Q5VT06 3117 aa11.93□□□□□ -0.5
PCOLCE-209ENST00000490909 ARXQ96QS3 562 aa11.93□□□□□ -0.5
PCOLCE-209ENST00000490909 NCAPD2Q15021 1401 aa11.93□□□□□ -0.5
PCOLCE-209ENST00000490909 USP47Q96K76 1375 aa11.92□□□□□ -0.5
PCOLCE-209ENST00000490909 C4BP0C0L5 1744 aa11.92□□□□□ -0.5
PCOLCE-209ENST00000490909 DDX54Q8TDD1 881 aaKnown RBP11.92□□□□□ -0.5
PCOLCE-209ENST00000490909 RRS1Q15050 365 aaKnown RBP11.91□□□□□ -0.5
PCOLCE-209ENST00000490909 USHBP1Q8N6Y0 703 aa11.91□□□□□ -0.5
PCOLCE-209ENST00000490909 COG3Q96JB2 828 aa11.91□□□□□ -0.5
PCOLCE-209ENST00000490909 SLC27A3Q5K4L6 730 aa11.9□□□□□ -0.5
PCOLCE-209ENST00000490909 DCAF8L1A6NGE4 600 aa11.89□□□□□ -0.51
PCOLCE-209ENST00000490909 PRIM1P49642 420 aaKnown RBP11.89□□□□□ -0.51
PCOLCE-209ENST00000490909 NBPF6Q5VWK0 638 aa11.89□□□□□ -0.51
PCOLCE-209ENST00000490909 NBPF4Q96M43 638 aa11.89□□□□□ -0.51
PCOLCE-209ENST00000490909 GGNBP2Q9H3C7 697 aa11.89□□□□□ -0.51
PCOLCE-209ENST00000490909 SMG6Q86US8 1419 aaKnown RBP11.88□□□□□ -0.51
PCOLCE-209ENST00000490909 FYB1O15117 783 aa11.88□□□□□ -0.51
PCOLCE-209ENST00000490909 NLGN2Q8NFZ4 835 aa11.88□□□□□ -0.51
PCOLCE-209ENST00000490909 SYTL4Q96C24 671 aaPredicted RBP11.88□□□□□ -0.51
PCOLCE-209ENST00000490909 INSRP06213 1382 aa11.88□□□□□ -0.51
PCOLCE-209ENST00000490909 FLT4P35916 1363 aa11.88□□□□□ -0.51
PCOLCE-209ENST00000490909 KIAA1551Q9HCM1 1747 aa11.88□□□□□ -0.51
PCOLCE-209ENST00000490909 NSD3Q9BZ95 1437 aa11.87□□□□□ -0.51
PCOLCE-209ENST00000490909 AMPHP49418 695 aa11.87□□□□□ -0.51
PCOLCE-209ENST00000490909 ZCRB1Q8TBF4 217 aaKnown RBP11.86□□□□□ -0.51
PCOLCE-209ENST00000490909 CCNL1Q9UK58 526 aaPredicted RBP11.86□□□□□ -0.51
PCOLCE-209ENST00000490909 COL5A3P25940 1745 aaPredicted RBP11.86□□□□□ -0.51
PCOLCE-209ENST00000490909 PALLDQ8WX93 1383 aa11.85□□□□□ -0.51
PCOLCE-209ENST00000490909 HSP90AB2PQ58FF8 381 aa11.85□□□□□ -0.51
PCOLCE-209ENST00000490909 AMIGO3Q86WK7 504 aa11.85□□□□□ -0.51
PCOLCE-209ENST00000490909 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
PCOLCE-209ENST00000490909 SLC16A10Q8TF71 515 aa11.85□□□□□ -0.51
PCOLCE-209ENST00000490909 TFCP2L1Q9NZI6 479 aa11.85□□□□□ -0.51
PCOLCE-209ENST00000490909 KIF13BQ9NQT8 1826 aa11.84□□□□□ -0.51
PCOLCE-209ENST00000490909 KIF24Q5T7B8 1368 aa11.84□□□□□ -0.51
PCOLCE-209ENST00000490909 COL23A1Q86Y22 540 aaPredicted RBP11.84□□□□□ -0.51
PCOLCE-209ENST00000490909 TIMELESSQ9UNS1 1208 aa11.84□□□□□ -0.51
PCOLCE-209ENST00000490909 PCDH11XQ9BZA7 1347 aa11.84□□□□□ -0.51
PCOLCE-209ENST00000490909 PCDH11YQ9BZA8 1340 aa11.84□□□□□ -0.51
PCOLCE-209ENST00000490909 C4AP0C0L4 1744 aa11.83□□□□□ -0.52
PCOLCE-209ENST00000490909 CICQ96RK0 1608 aaPredicted RBP11.83□□□□□ -0.52
PCOLCE-209ENST00000490909 CYP27B1O15528 508 aa11.83□□□□□ -0.52
PCOLCE-209ENST00000490909 YBX3P16989 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
PCOLCE-209ENST00000490909 MSL1Q68DK7 614 aa11.83□□□□□ -0.52
PCOLCE-209ENST00000490909 CCER1Q8TC90 406 aaPredicted RBP11.83□□□□□ -0.52
PCOLCE-209ENST00000490909 CARD14Q9BXL6 1004 aa11.83□□□□□ -0.52
PCOLCE-209ENST00000490909 EMILIN1Q9Y6C2 1016 aa11.83□□□□□ -0.52
PCOLCE-209ENST00000490909 CGNL1Q0VF96 1302 aa11.83□□□□□ -0.52
PCOLCE-209ENST00000490909 ZNF831Q5JPB2 1677 aa11.82□□□□□ -0.52
PCOLCE-209ENST00000490909 POLD1P28340 1107 aa11.82□□□□□ -0.52
PCOLCE-209ENST00000490909 TMF1P82094 1093 aa11.82□□□□□ -0.52
PCOLCE-209ENST00000490909 ADCY9O60503 1353 aa11.81□□□□□ -0.52
PCOLCE-209ENST00000490909 BRCA1P38398 1863 aaKnown RBP11.81□□□□□ -0.52
PCOLCE-209ENST00000490909 GPR162Q16538 588 aa11.81□□□□□ -0.52
PCOLCE-209ENST00000490909 RAPGEF4Q8WZA2 1011 aa11.81□□□□□ -0.52
PCOLCE-209ENST00000490909 TATP17735 454 aaPredicted RBP11.8□□□□□ -0.52
PCOLCE-209ENST00000490909 C1QTNF8P60827 252 aa11.8□□□□□ -0.52
PCOLCE-209ENST00000490909 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
PCOLCE-209ENST00000490909 SMIM5Q71RC9 77 aa11.79□□□□□ -0.52
PCOLCE-209ENST00000490909 N4BP2Q86UW6 1770 aaPredicted RBP11.79□□□□□ -0.52
PCOLCE-209ENST00000490909 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
PCOLCE-209ENST00000490909 KDRP35968 1356 aa11.79□□□□□ -0.52
PCOLCE-209ENST00000490909 ATP10DQ9P241 1426 aa11.78□□□□□ -0.52
PCOLCE-209ENST00000490909 TJP1Q07157 1748 aa11.78□□□□□ -0.52
PCOLCE-209ENST00000490909 SENP3-EIF4A1A0A087X0R7 540 aa11.78□□□□□ -0.52
PCOLCE-209ENST00000490909 MYH14Q7Z406 1995 aaKnown RBP11.78□□□□□ -0.52
PCOLCE-209ENST00000490909 MSH5O43196 834 aa11.77□□□□□ -0.53
PCOLCE-209ENST00000490909 SLC24A1O60721 1099 aa11.77□□□□□ -0.53
PCOLCE-209ENST00000490909 MPRIPQ6WCQ1 1025 aa11.77□□□□□ -0.53
PCOLCE-209ENST00000490909 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
PCOLCE-209ENST00000490909 PIGBQ92521 554 aa11.76□□□□□ -0.53
PCOLCE-209ENST00000490909 GIGYF1O75420 1035 aaPredicted RBP11.75□□□□□ -0.53
PCOLCE-209ENST00000490909 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
PCOLCE-209ENST00000490909 LINC00116Q8NCU8 138 aa11.75□□□□□ -0.53
PCOLCE-209ENST00000490909 KDM6AO15550 1401 aaPredicted RBP11.75□□□□□ -0.53
PCOLCE-209ENST00000490909 PXDNLA1KZ92 1463 aa11.75□□□□□ -0.53
PCOLCE-209ENST00000490909 SCN11AQ9UI33 1791 aa11.74□□□□□ -0.53
PCOLCE-209ENST00000490909 PHF14O94880 888 aa11.74□□□□□ -0.53
PCOLCE-209ENST00000490909 ITPK1Q13572 414 aa11.74□□□□□ -0.53
PCOLCE-209ENST00000490909 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
PCOLCE-209ENST00000490909 EYA1Q99502 592 aa11.74□□□□□ -0.53
PCOLCE-209ENST00000490909 WASHC2AQ641Q2 1341 aa11.74□□□□□ -0.53
PCOLCE-209ENST00000490909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.73□□□□□ -0.53
PCOLCE-209ENST00000490909 CDCA8Q53HL2 280 aa11.73□□□□□ -0.53
PCOLCE-209ENST00000490909 AK7Q96M32 723 aa11.73□□□□□ -0.53
PCOLCE-209ENST00000490909 PLEKHG2Q9H7P9 1386 aa11.73□□□□□ -0.53
PCOLCE-209ENST00000490909 ARFGEF1Q9Y6D6 1849 aa11.72□□□□□ -0.53
PCOLCE-209ENST00000490909 C10orf71Q711Q0 1435 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms