RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 KDM3BQ7LBC6 1761 aa12.74□□□□□ -0.37
SUPT20H-220ENST00000490716 HAP1P54257 671 aaPredicted RBP12.73□□□□□ -0.37
SUPT20H-220ENST00000490716 EIF4A2Q14240 407 aaKnown RBP12.73□□□□□ -0.37
SUPT20H-220ENST00000490716 PROM2Q8N271 834 aa12.73□□□□□ -0.37
SUPT20H-220ENST00000490716 C4AP0C0L4 1744 aa12.73□□□□□ -0.37
SUPT20H-220ENST00000490716 C4BP0C0L5 1744 aa12.73□□□□□ -0.37
SUPT20H-220ENST00000490716 KIAA1551Q9HCM1 1747 aa12.73□□□□□ -0.37
SUPT20H-220ENST00000490716 FAM196AQ6ZSG2 479 aa12.72□□□□□ -0.37
SUPT20H-220ENST00000490716 KDM6AO15550 1401 aaPredicted RBP12.72□□□□□ -0.37
SUPT20H-220ENST00000490716 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
SUPT20H-220ENST00000490716 IL2RBP14784 551 aa12.71□□□□□ -0.37
SUPT20H-220ENST00000490716 PLSCR1O15162 318 aa12.71□□□□□ -0.37
SUPT20H-220ENST00000490716 EYA1Q99502 592 aa12.71□□□□□ -0.37
SUPT20H-220ENST00000490716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.7□□□□□ -0.386e-7■■■□□ 16.4
SUPT20H-220ENST00000490716 TOM1L2Q6ZVM7 507 aa12.7□□□□□ -0.38
SUPT20H-220ENST00000490716 KCPQ6ZWJ8 1503 aa12.7□□□□□ -0.38
SUPT20H-220ENST00000490716 BCL11BQ9C0K0 894 aaPredicted RBP12.7□□□□□ -0.38
SUPT20H-220ENST00000490716 EVA1CP58658 441 aa12.69□□□□□ -0.38
SUPT20H-220ENST00000490716 FAM182BQ5T319 152 aa12.69□□□□□ -0.38
SUPT20H-220ENST00000490716 MYH14Q7Z406 1995 aaKnown RBP12.69□□□□□ -0.38
SUPT20H-220ENST00000490716 CYP27B1O15528 508 aa12.68□□□□□ -0.38
SUPT20H-220ENST00000490716 DDB1Q16531 1140 aa12.67□□□□□ -0.38
SUPT20H-220ENST00000490716 LAMB4A4D0S4 1761 aa12.67□□□□□ -0.38
SUPT20H-220ENST00000490716 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
SUPT20H-220ENST00000490716 NRXN2Q9P2S2 1712 aa12.65□□□□□ -0.38
SUPT20H-220ENST00000490716 BCORQ6W2J9 1755 aa12.65□□□□□ -0.38
SUPT20H-220ENST00000490716 DEFB132Q7Z7B7 95 aa12.65□□□□□ -0.38
SUPT20H-220ENST00000490716 SOX12O15370 315 aa12.64□□□□□ -0.39
SUPT20H-220ENST00000490716 KCNQ2O43526 872 aa12.63□□□□□ -0.39
SUPT20H-220ENST00000490716 AMPHP49418 695 aa12.63□□□□□ -0.39
SUPT20H-220ENST00000490716 USP35Q9P2H5 1018 aa12.63□□□□□ -0.39
SUPT20H-220ENST00000490716 BRCA1P38398 1863 aaKnown RBP12.63□□□□□ -0.39
SUPT20H-220ENST00000490716 TRIM37O94972 964 aa12.63□□□□□ -0.39
SUPT20H-220ENST00000490716 KNSTRNQ9Y448 316 aa12.63□□□□□ -0.39
SUPT20H-220ENST00000490716 EXOC5O00471 708 aa12.62□□□□□ -0.39
SUPT20H-220ENST00000490716 USHBP1Q8N6Y0 703 aa12.62□□□□□ -0.39
SUPT20H-220ENST00000490716 PCDH11XQ9BZA7 1347 aa12.62□□□□□ -0.39
SUPT20H-220ENST00000490716 PCDH11YQ9BZA8 1340 aa12.62□□□□□ -0.39
SUPT20H-220ENST00000490716 EZH2Q15910 746 aaKnown RBP12.62□□□□□ -0.39
SUPT20H-220ENST00000490716 CEMIPQ8WUJ3 1361 aa12.61□□□□□ -0.39
SUPT20H-220ENST00000490716 NLRP2Q9NX02 1062 aa12.61□□□□□ -0.39
SUPT20H-220ENST00000490716 CCDC9Q9Y3X0 531 aaKnown RBP12.61□□□□□ -0.39
SUPT20H-220ENST00000490716 PPP2R1AP30153 589 aa12.61□□□□□ -0.39
SUPT20H-220ENST00000490716 MTHFSP49914 203 aa12.61□□□□□ -0.39
SUPT20H-220ENST00000490716 ZCRB1Q8TBF4 217 aaKnown RBP12.61□□□□□ -0.39
SUPT20H-220ENST00000490716 PHKG2P15735 406 aa12.6□□□□□ -0.39
SUPT20H-220ENST00000490716 LRRC4BQ9NT99 713 aa12.6□□□□□ -0.39
SUPT20H-220ENST00000490716 SCN7AQ01118 1682 aa12.6□□□□□ -0.39
SUPT20H-220ENST00000490716 MORC1Q86VD1 984 aa12.6□□□□□ -0.39
SUPT20H-220ENST00000490716 AEBP1Q8IUX7 1158 aa12.6□□□□□ -0.39
SUPT20H-220ENST00000490716 AKT1S1Q96B36 256 aa12.6□□□□□ -0.39
SUPT20H-220ENST00000490716 EN1Q05925 392 aaPredicted RBP12.59□□□□□ -0.39
SUPT20H-220ENST00000490716 PLEKHF1Q96S99 279 aa12.59□□□□□ -0.39
SUPT20H-220ENST00000490716 PDE3BQ13370 1112 aa12.58□□□□□ -0.4
SUPT20H-220ENST00000490716 UTRNP46939 3433 aa12.58□□□□□ -0.4
SUPT20H-220ENST00000490716 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
SUPT20H-220ENST00000490716 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.4
SUPT20H-220ENST00000490716 DLEC1Q9Y238 1755 aa12.58□□□□□ -0.4
SUPT20H-220ENST00000490716 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
SUPT20H-220ENST00000490716 CSB-PGBD3P0DP91 1061 aa12.56□□□□□ -0.4
SUPT20H-220ENST00000490716 GOLGB1Q14789 3259 aaKnown RBP12.55□□□□□ -0.4
SUPT20H-220ENST00000490716 LTV1Q96GA3 475 aaPredicted RBP12.55□□□□□ -0.4
SUPT20H-220ENST00000490716 SLC4A9Q96Q91 983 aa12.55□□□□□ -0.4
SUPT20H-220ENST00000490716 ZBTB7CA1YPR0 619 aa12.54□□□□□ -0.4
SUPT20H-220ENST00000490716 BAG6P46379 1132 aa12.54□□□□□ -0.4
SUPT20H-220ENST00000490716 CC2D1BQ5T0F9 858 aaKnown RBP12.54□□□□□ -0.4
SUPT20H-220ENST00000490716 AFDNP55196 1824 aaKnown RBP12.54□□□□□ -0.4
SUPT20H-220ENST00000490716 APBA3O96018 575 aa12.53□□□□□ -0.4
SUPT20H-220ENST00000490716 TATP17735 454 aaPredicted RBP12.53□□□□□ -0.4
SUPT20H-220ENST00000490716 HEG1Q9ULI3 1381 aa12.53□□□□□ -0.4
SUPT20H-220ENST00000490716 ZEB1P37275 1124 aaPredicted RBP12.53□□□□□ -0.4
SUPT20H-220ENST00000490716 PIGBQ92521 554 aa12.53□□□□□ -0.4
SUPT20H-220ENST00000490716 SLC27A3Q5K4L6 730 aa12.53□□□□□ -0.4
SUPT20H-220ENST00000490716 ERVV-2B6SEH9 535 aa12.52□□□□□ -0.4
SUPT20H-220ENST00000490716 TXNRD1Q16881 649 aa12.52□□□□□ -0.4
SUPT20H-220ENST00000490716 ZNF827Q17R98 1081 aa12.52□□□□□ -0.4
SUPT20H-220ENST00000490716 AMIGO3Q86WK7 504 aa12.52□□□□□ -0.41
SUPT20H-220ENST00000490716 AMOTQ4VCS5 1084 aa12.52□□□□□ -0.41
SUPT20H-220ENST00000490716 TNNT2P45379 298 aaPredicted RBP12.51□□□□□ -0.41
SUPT20H-220ENST00000490716 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
SUPT20H-220ENST00000490716 ARFGEF2Q9Y6D5 1785 aa12.51□□□□□ -0.41
SUPT20H-220ENST00000490716 MTHFSDQ2M296 383 aaKnown RBP12.5□□□□□ -0.41
SUPT20H-220ENST00000490716 MAP3K5Q99683 1374 aa12.5□□□□□ -0.41
SUPT20H-220ENST00000490716 DIAPH1O60610 1272 aaKnown RBP12.5□□□□□ -0.41
SUPT20H-220ENST00000490716 PTGER2P43116 358 aa12.5□□□□□ -0.41
SUPT20H-220ENST00000490716 RAPGEF4Q8WZA2 1011 aa12.5□□□□□ -0.41
SUPT20H-220ENST00000490716 ATG3Q9NT62 314 aa12.5□□□□□ -0.41
SUPT20H-220ENST00000490716 SPG7Q9UQ90 795 aa12.5□□□□□ -0.41
SUPT20H-220ENST00000490716 RALBP1Q15311 655 aa12.5□□□□□ -0.41
SUPT20H-220ENST00000490716 SULT6B1Q6IMI4 303 aa12.5□□□□□ -0.41
SUPT20H-220ENST00000490716 IFNL2Q8IZJ0 200 aa12.5□□□□□ -0.41
SUPT20H-220ENST00000490716 DCAF5Q96JK2 942 aa12.5□□□□□ -0.41
SUPT20H-220ENST00000490716 PHACTR3Q96KR7 559 aa12.5□□□□□ -0.41
SUPT20H-220ENST00000490716 PALLDQ8WX93 1383 aa12.49□□□□□ -0.41
SUPT20H-220ENST00000490716 AKAP4Q5JQC9 854 aa12.49□□□□□ -0.41
SUPT20H-220ENST00000490716 PNPLA7Q6ZV29 1317 aa12.49□□□□□ -0.41
SUPT20H-220ENST00000490716 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
SUPT20H-220ENST00000490716 ANKRD31Q8N7Z5 1873 aa12.48□□□□□ -0.41
SUPT20H-220ENST00000490716 ACSBG1Q96GR2 724 aa12.48□□□□□ -0.41
SUPT20H-220ENST00000490716 PRKRIP1Q9H875 184 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms