RNA–Protein interactions for RNA: ENST00000490544.1

C9orf43-203, Transcript of chromosome 9 open reading frame 43, humanhuman

TSL 3

Gene C9orf43, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-203ENST00000490544 LRP5O75197 1615 aa20.93■□□□□ 0.94
C9orf43-203ENST00000490544 ZNF316A6NFI3 1004 aaPredicted RBP20.92■□□□□ 0.94
C9orf43-203ENST00000490544 NCAPD2Q15021 1401 aa20.91■□□□□ 0.94
C9orf43-203ENST00000490544 NHSQ6T4R5 1651 aa20.91■□□□□ 0.94
C9orf43-203ENST00000490544 ZCRB1Q8TBF4 217 aaKnown RBP20.91■□□□□ 0.94
C9orf43-203ENST00000490544 IGSF1Q8N6C5 1336 aa20.9■□□□□ 0.94
C9orf43-203ENST00000490544 DIAPH1O60610 1272 aaKnown RBP20.89■□□□□ 0.93
C9orf43-203ENST00000490544 PPP2R1AP30153 589 aa20.89■□□□□ 0.93
C9orf43-203ENST00000490544 CFAP53Q96M91 514 aa20.89■□□□□ 0.93
C9orf43-203ENST00000490544 IL13P35225 146 aa20.88■□□□□ 0.93
C9orf43-203ENST00000490544 BAG6P46379 1132 aa20.88■□□□□ 0.93
C9orf43-203ENST00000490544 COL3A1P02461 1466 aaPredicted RBP20.88■□□□□ 0.93
C9orf43-203ENST00000490544 PARD3Q8TEW0 1356 aa20.87■□□□□ 0.93
C9orf43-203ENST00000490544 ACSBG1Q96GR2 724 aa20.87■□□□□ 0.93
C9orf43-203ENST00000490544 BTAF1O14981 1849 aa20.87■□□□□ 0.93
C9orf43-203ENST00000490544 PCDH11XQ9BZA7 1347 aa20.86■□□□□ 0.93
C9orf43-203ENST00000490544 PCDH11YQ9BZA8 1340 aa20.86■□□□□ 0.93
C9orf43-203ENST00000490544 PSDA5PKW4 1024 aaPredicted RBP20.86■□□□□ 0.93
C9orf43-203ENST00000490544 APBA3O96018 575 aa20.86■□□□□ 0.93
C9orf43-203ENST00000490544 SULT6B1Q6IMI4 303 aa20.86■□□□□ 0.93
C9orf43-203ENST00000490544 AEBP1Q8IUX7 1158 aa20.86■□□□□ 0.93
C9orf43-203ENST00000490544 U2SURPO15042 1029 aaKnown RBP20.85■□□□□ 0.93
C9orf43-203ENST00000490544 SPG7Q9UQ90 795 aa20.85■□□□□ 0.93
C9orf43-203ENST00000490544 HMOX1P09601 288 aa20.84■□□□□ 0.93
C9orf43-203ENST00000490544 EN1Q05925 392 aaPredicted RBP20.83■□□□□ 0.93
C9orf43-203ENST00000490544 SYTL4Q96C24 671 aaPredicted RBP20.83■□□□□ 0.93
C9orf43-203ENST00000490544 BCL9O00512 1426 aa20.83■□□□□ 0.93
C9orf43-203ENST00000490544 ITGB4P16144 1822 aa20.83■□□□□ 0.92
C9orf43-203ENST00000490544 TOGARAM1Q9Y4F4 1720 aa20.82■□□□□ 0.92
C9orf43-203ENST00000490544 PTF1AQ7RTS3 328 aa20.82■□□□□ 0.92
C9orf43-203ENST00000490544 VIRMAQ69YN4 1812 aaKnown RBP20.82■□□□□ 0.92
C9orf43-203ENST00000490544 RGPD3A6NKT7 1758 aaPredicted RBP20.82■□□□□ 0.92
C9orf43-203ENST00000490544 RGPD4Q7Z3J3 1758 aa20.82■□□□□ 0.92
C9orf43-203ENST00000490544 RREB1Q92766 1687 aa20.81■□□□□ 0.92
C9orf43-203ENST00000490544 KCNQ2O43526 872 aa20.81■□□□□ 0.92
C9orf43-203ENST00000490544 RALBP1Q15311 655 aa20.81■□□□□ 0.92
C9orf43-203ENST00000490544 BCL11BQ9C0K0 894 aaPredicted RBP20.81■□□□□ 0.92
C9orf43-203ENST00000490544 CYP27B1O15528 508 aa20.79■□□□□ 0.92
C9orf43-203ENST00000490544 KDRP35968 1356 aa20.79■□□□□ 0.92
C9orf43-203ENST00000490544 NUP188Q5SRE5 1749 aa20.78■□□□□ 0.92
C9orf43-203ENST00000490544 EZH2Q15910 746 aaKnown RBP20.78■□□□□ 0.92
C9orf43-203ENST00000490544 PLEKHO1Q53GL0 409 aaPredicted RBP20.78■□□□□ 0.92
C9orf43-203ENST00000490544 NUDCQ9Y266 331 aa20.78■□□□□ 0.92
C9orf43-203ENST00000490544 ZNF530Q6P9A1 599 aaPredicted RBP20.77■□□□□ 0.92
C9orf43-203ENST00000490544 MYBBP1AQ9BQG0 1328 aaKnown RBP20.77■□□□□ 0.91
C9orf43-203ENST00000490544 PRIM1P49642 420 aaKnown RBP20.76■□□□□ 0.91
C9orf43-203ENST00000490544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.76■□□□□ 0.91
C9orf43-203ENST00000490544 U2AF1L5P0DN76 240 aaPredicted RBP20.75■□□□□ 0.91
C9orf43-203ENST00000490544 U2AF1Q01081 240 aaKnown RBP eCLIP20.75■□□□□ 0.91
C9orf43-203ENST00000490544 AMOTQ4VCS5 1084 aa20.75■□□□□ 0.91
C9orf43-203ENST00000490544 IFNL2Q8IZJ0 200 aa20.75■□□□□ 0.91
C9orf43-203ENST00000490544 PLEKHG2Q9H7P9 1386 aa20.74■□□□□ 0.91
C9orf43-203ENST00000490544 PHKG2P15735 406 aa20.74■□□□□ 0.91
C9orf43-203ENST00000490544 C1orf141Q5JVX7 400 aa20.74■□□□□ 0.91
C9orf43-203ENST00000490544 SCN11AQ9UI33 1791 aa20.73■□□□□ 0.91
C9orf43-203ENST00000490544 CAMKK2Q96RR4 588 aa20.73■□□□□ 0.91
C9orf43-203ENST00000490544 R3HDM1Q15032 1099 aaKnown RBP20.72■□□□□ 0.91
C9orf43-203ENST00000490544 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
C9orf43-203ENST00000490544 MPRIPQ6WCQ1 1025 aa20.71■□□□□ 0.91
C9orf43-203ENST00000490544 LY75O60449 1722 aa20.7■□□□□ 0.9
C9orf43-203ENST00000490544 PRKAR2BP31323 418 aa20.7■□□□□ 0.9
C9orf43-203ENST00000490544 PLSCR1O15162 318 aa20.69■□□□□ 0.9
C9orf43-203ENST00000490544 HSP90AB1P08238 724 aaKnown RBP20.69■□□□□ 0.9
C9orf43-203ENST00000490544 NKX1-1Q15270 411 aaPredicted RBP20.68■□□□□ 0.9
C9orf43-203ENST00000490544 MTHFSDQ2M296 383 aaKnown RBP20.67■□□□□ 0.9
C9orf43-203ENST00000490544 RSPH6AQ9H0K4 717 aa20.67■□□□□ 0.9
C9orf43-203ENST00000490544 TMOD3Q9NYL9 352 aa20.67■□□□□ 0.9
C9orf43-203ENST00000490544 KDM6AO15550 1401 aaPredicted RBP20.67■□□□□ 0.9
C9orf43-203ENST00000490544 DCAF5Q96JK2 942 aa20.66■□□□□ 0.9
C9orf43-203ENST00000490544 DLG5Q8TDM6 1919 aa20.65■□□□□ 0.9
C9orf43-203ENST00000490544 ANP32CO43423 234 aa20.65■□□□□ 0.9
C9orf43-203ENST00000490544 YY1P25490 414 aa20.65■□□□□ 0.9
C9orf43-203ENST00000490544 TXNRD1Q16881 649 aa20.65■□□□□ 0.9
C9orf43-203ENST00000490544 AKAP4Q5JQC9 854 aa20.65■□□□□ 0.9
C9orf43-203ENST00000490544 NEFMP07197 916 aa20.63■□□□□ 0.89
C9orf43-203ENST00000490544 GAS2L2Q8NHY3 880 aa20.63■□□□□ 0.89
C9orf43-203ENST00000490544 PIGBQ92521 554 aa20.63■□□□□ 0.89
C9orf43-203ENST00000490544 C5P01031 1676 aa20.63■□□□□ 0.89
C9orf43-203ENST00000490544 FCHSD2O94868 740 aa20.62■□□□□ 0.89
C9orf43-203ENST00000490544 CABP4P57796 275 aa20.62■□□□□ 0.89
C9orf43-203ENST00000490544 NBPF14Q5TI25 921 aa20.62■□□□□ 0.89
C9orf43-203ENST00000490544 PHACTR3Q96KR7 559 aa20.62■□□□□ 0.89
C9orf43-203ENST00000490544 PALLDQ8WX93 1383 aa20.61■□□□□ 0.89
C9orf43-203ENST00000490544 MAP3K5Q99683 1374 aa20.61■□□□□ 0.89
C9orf43-203ENST00000490544 KCNQ4P56696 695 aa20.61■□□□□ 0.89
C9orf43-203ENST00000490544 WDR43Q15061 677 aaKnown RBP eCLIP20.61■□□□□ 0.89
C9orf43-203ENST00000490544 PROM2Q8N271 834 aa20.61■□□□□ 0.89
C9orf43-203ENST00000490544 TAF1LQ8IZX4 1826 aa20.61■□□□□ 0.89
C9orf43-203ENST00000490544 ERVV-2B6SEH9 535 aa20.6■□□□□ 0.89
C9orf43-203ENST00000490544 ADAMTS7Q9UKP4 1686 aa20.6■□□□□ 0.89
C9orf43-203ENST00000490544 PAPPAQ13219 1627 aa20.6■□□□□ 0.89
C9orf43-203ENST00000490544 MAPK8IP3Q9UPT6 1336 aa20.59■□□□□ 0.89
C9orf43-203ENST00000490544 CCNL1Q9UK58 526 aaPredicted RBP20.59■□□□□ 0.89
C9orf43-203ENST00000490544 GNAT3A8MTJ3 354 aa20.58■□□□□ 0.89
C9orf43-203ENST00000490544 SMARCC1Q92922 1105 aaPredicted RBP20.58■□□□□ 0.89
C9orf43-203ENST00000490544 LGR6Q9HBX8 967 aa20.58■□□□□ 0.89
C9orf43-203ENST00000490544 TUBGCP6Q96RT7 1819 aa20.57■□□□□ 0.88
C9orf43-203ENST00000490544 SIPA1L3O60292 1781 aaPredicted RBP20.57■□□□□ 0.88
C9orf43-203ENST00000490544 RNMTO43148 476 aaKnown RBP20.57■□□□□ 0.88
C9orf43-203ENST00000490544 SLC27A3Q5K4L6 730 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms