RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 SF3B2Q13435 895 aaKnown RBP12.38□□□□□ -0.43
ECM1-205ENST00000490346 CCDC125Q86Z20 511 aa12.38□□□□□ -0.43
ECM1-205ENST00000490346 AEBP1Q8IUX7 1158 aa12.38□□□□□ -0.43
ECM1-205ENST00000490346 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
ECM1-205ENST00000490346 SBF2Q86WG5 1849 aa12.37□□□□□ -0.43
ECM1-205ENST00000490346 SULT6B1Q6IMI4 303 aa12.37□□□□□ -0.43
ECM1-205ENST00000490346 PKD1L3Q7Z443 1732 aa12.37□□□□□ -0.43
ECM1-205ENST00000490346 RALBP1Q15311 655 aa12.36□□□□□ -0.43
ECM1-205ENST00000490346 DEFB132Q7Z7B7 95 aa12.36□□□□□ -0.43
ECM1-205ENST00000490346 CFAP53Q96M91 514 aa12.36□□□□□ -0.43
ECM1-205ENST00000490346 BCL9O00512 1426 aa12.36□□□□□ -0.43
ECM1-205ENST00000490346 HMOX1P09601 288 aa12.35□□□□□ -0.43
ECM1-205ENST00000490346 PTF1AQ7RTS3 328 aa12.35□□□□□ -0.43
ECM1-205ENST00000490346 ACSBG1Q96GR2 724 aa12.35□□□□□ -0.43
ECM1-205ENST00000490346 PCDH11XQ9BZA7 1347 aa12.35□□□□□ -0.43
ECM1-205ENST00000490346 PCDH11YQ9BZA8 1340 aa12.35□□□□□ -0.43
ECM1-205ENST00000490346 KDRP35968 1356 aa12.34□□□□□ -0.43
ECM1-205ENST00000490346 U2SURPO15042 1029 aaKnown RBP12.34□□□□□ -0.43
ECM1-205ENST00000490346 BAG6P46379 1132 aa12.34□□□□□ -0.43
ECM1-205ENST00000490346 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
ECM1-205ENST00000490346 NHSQ6T4R5 1651 aa12.34□□□□□ -0.43
ECM1-205ENST00000490346 CYP27B1O15528 508 aa12.33□□□□□ -0.44
ECM1-205ENST00000490346 KCNQ2O43526 872 aa12.33□□□□□ -0.44
ECM1-205ENST00000490346 APBA3O96018 575 aa12.33□□□□□ -0.44
ECM1-205ENST00000490346 BCL11BQ9C0K0 894 aaPredicted RBP12.33□□□□□ -0.44
ECM1-205ENST00000490346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.33□□□□□ -0.44
ECM1-205ENST00000490346 DOT1LQ8TEK3 1739 aa12.33□□□□□ -0.44
ECM1-205ENST00000490346 EN1Q05925 392 aaPredicted RBP12.32□□□□□ -0.44
ECM1-205ENST00000490346 PRKRIP1Q9H875 184 aaPredicted RBP12.32□□□□□ -0.44
ECM1-205ENST00000490346 KAT6BQ8WYB5 2073 aa12.32□□□□□ -0.44
ECM1-205ENST00000490346 MYBBP1AQ9BQG0 1328 aaKnown RBP12.32□□□□□ -0.44
ECM1-205ENST00000490346 PLEKHG2Q9H7P9 1386 aa12.31□□□□□ -0.44
ECM1-205ENST00000490346 PLEKHO1Q53GL0 409 aaPredicted RBP12.31□□□□□ -0.44
ECM1-205ENST00000490346 NUDCQ9Y266 331 aa12.31□□□□□ -0.44
ECM1-205ENST00000490346 PHKG2P15735 406 aa12.3□□□□□ -0.44
ECM1-205ENST00000490346 PRIM1P49642 420 aaKnown RBP12.3□□□□□ -0.44
ECM1-205ENST00000490346 AMOTQ4VCS5 1084 aa12.3□□□□□ -0.44
ECM1-205ENST00000490346 ZNF530Q6P9A1 599 aaPredicted RBP12.3□□□□□ -0.44
ECM1-205ENST00000490346 IFNL2Q8IZJ0 200 aa12.3□□□□□ -0.44
ECM1-205ENST00000490346 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
ECM1-205ENST00000490346 TOGARAM1Q9Y4F4 1720 aa12.29□□□□□ -0.44
ECM1-205ENST00000490346 U2AF1L5P0DN76 240 aaPredicted RBP12.29□□□□□ -0.44
ECM1-205ENST00000490346 U2AF1Q01081 240 aaKnown RBP eCLIP12.29□□□□□ -0.44
ECM1-205ENST00000490346 EZH2Q15910 746 aaKnown RBP12.29□□□□□ -0.44
ECM1-205ENST00000490346 CAMKK2Q96RR4 588 aa12.29□□□□□ -0.44
ECM1-205ENST00000490346 BTAF1O14981 1849 aa12.29□□□□□ -0.44
ECM1-205ENST00000490346 NKX1-1Q15270 411 aaPredicted RBP12.28□□□□□ -0.44
ECM1-205ENST00000490346 RSPH6AQ9H0K4 717 aa12.28□□□□□ -0.44
ECM1-205ENST00000490346 PRKAR2BP31323 418 aa12.27□□□□□ -0.45
ECM1-205ENST00000490346 C1orf141Q5JVX7 400 aa12.27□□□□□ -0.45
ECM1-205ENST00000490346 RREB1Q92766 1687 aa12.26□□□□□ -0.45
ECM1-205ENST00000490346 RGPD3A6NKT7 1758 aaPredicted RBP12.26□□□□□ -0.45
ECM1-205ENST00000490346 RGPD4Q7Z3J3 1758 aa12.26□□□□□ -0.45
ECM1-205ENST00000490346 ITGB4P16144 1822 aa12.26□□□□□ -0.45
ECM1-205ENST00000490346 PLSCR1O15162 318 aa12.26□□□□□ -0.45
ECM1-205ENST00000490346 MTHFSDQ2M296 383 aaKnown RBP12.26□□□□□ -0.45
ECM1-205ENST00000490346 MPRIPQ6WCQ1 1025 aa12.26□□□□□ -0.45
ECM1-205ENST00000490346 KDM6AO15550 1401 aaPredicted RBP12.26□□□□□ -0.45
ECM1-205ENST00000490346 ANP32CO43423 234 aa12.25□□□□□ -0.45
ECM1-205ENST00000490346 HSP90AB1P08238 724 aaKnown RBP12.25□□□□□ -0.45
ECM1-205ENST00000490346 FCHSD2O94868 740 aa12.24□□□□□ -0.45
ECM1-205ENST00000490346 AKAP4Q5JQC9 854 aa12.24□□□□□ -0.45
ECM1-205ENST00000490346 NUP188Q5SRE5 1749 aa12.24□□□□□ -0.45
ECM1-205ENST00000490346 DCAF5Q96JK2 942 aa12.24□□□□□ -0.45
ECM1-205ENST00000490346 PHACTR3Q96KR7 559 aa12.24□□□□□ -0.45
ECM1-205ENST00000490346 TXNRD1Q16881 649 aa12.23□□□□□ -0.45
ECM1-205ENST00000490346 PROM2Q8N271 834 aa12.23□□□□□ -0.45
ECM1-205ENST00000490346 PIGBQ92521 554 aa12.23□□□□□ -0.45
ECM1-205ENST00000490346 TMOD3Q9NYL9 352 aa12.23□□□□□ -0.45
ECM1-205ENST00000490346 ERVV-2B6SEH9 535 aa12.22□□□□□ -0.45
ECM1-205ENST00000490346 GAS2L2Q8NHY3 880 aa12.22□□□□□ -0.45
ECM1-205ENST00000490346 SCN11AQ9UI33 1791 aa12.22□□□□□ -0.45
ECM1-205ENST00000490346 MAP3K5Q99683 1374 aa12.21□□□□□ -0.45
ECM1-205ENST00000490346 VIRMAQ69YN4 1812 aaKnown RBP12.21□□□□□ -0.45
ECM1-205ENST00000490346 LY75O60449 1722 aa12.21□□□□□ -0.45
ECM1-205ENST00000490346 CABP4P57796 275 aa12.21□□□□□ -0.45
ECM1-205ENST00000490346 CCDC184Q52MB2 194 aa12.21□□□□□ -0.45
ECM1-205ENST00000490346 LGR6Q9HBX8 967 aa12.21□□□□□ -0.45
ECM1-205ENST00000490346 RNMTO43148 476 aaKnown RBP12.2□□□□□ -0.46
ECM1-205ENST00000490346 KCNQ4P56696 695 aa12.2□□□□□ -0.46
ECM1-205ENST00000490346 WDR43Q15061 677 aaKnown RBP eCLIP12.2□□□□□ -0.46
ECM1-205ENST00000490346 PLEKHF1Q96S99 279 aa12.2□□□□□ -0.46
ECM1-205ENST00000490346 ADAMTS7Q9UKP4 1686 aa12.19□□□□□ -0.46
ECM1-205ENST00000490346 PALLDQ8WX93 1383 aa12.19□□□□□ -0.46
ECM1-205ENST00000490346 PSDA5PKW4 1024 aaPredicted RBP12.19□□□□□ -0.46
ECM1-205ENST00000490346 GNAT3A8MTJ3 354 aa12.19□□□□□ -0.46
ECM1-205ENST00000490346 NEFMP07197 916 aa12.19□□□□□ -0.46
ECM1-205ENST00000490346 NFATC2IPQ8NCF5 419 aa12.19□□□□□ -0.46
ECM1-205ENST00000490346 ANO8Q9HCE9 1232 aaPredicted RBP12.19□□□□□ -0.46
ECM1-205ENST00000490346 LRRC4BQ9NT99 713 aa12.19□□□□□ -0.46
ECM1-205ENST00000490346 ASAP1Q9ULH1 1129 aa12.19□□□□□ -0.46
ECM1-205ENST00000490346 MAPK8IP3Q9UPT6 1336 aa12.18□□□□□ -0.46
ECM1-205ENST00000490346 SLC27A3Q5K4L6 730 aa12.18□□□□□ -0.46
ECM1-205ENST00000490346 NBPF14Q5TI25 921 aa12.18□□□□□ -0.46
ECM1-205ENST00000490346 SMARCC1Q92922 1105 aaPredicted RBP12.18□□□□□ -0.46
ECM1-205ENST00000490346 PNNQ9H307 717 aaKnown RBP12.18□□□□□ -0.46
ECM1-205ENST00000490346 SLC52A2Q9HAB3 445 aa12.18□□□□□ -0.46
ECM1-205ENST00000490346 ATG3Q9NT62 314 aa12.18□□□□□ -0.46
ECM1-205ENST00000490346 CCNL1Q9UK58 526 aaPredicted RBP12.18□□□□□ -0.46
ECM1-205ENST00000490346 ADAMTS8Q9UP79 889 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms