RNA–Protein interactions for RNA: ENST00000490008.1

COMMD2-206, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-206ENST00000490008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.04■□□□□ 0.64
COMMD2-206ENST00000490008 MRS2Q9HD23 443 aa19.03■□□□□ 0.64
COMMD2-206ENST00000490008 MARCH10Q8NA82 808 aaPredicted RBP19.02■□□□□ 0.64
COMMD2-206ENST00000490008 DISP2A7MBM2 1401 aa19■□□□□ 0.63
COMMD2-206ENST00000490008 PRKAR2BP31323 418 aa19■□□□□ 0.63
COMMD2-206ENST00000490008 C1orf141Q5JVX7 400 aa19■□□□□ 0.63
COMMD2-206ENST00000490008 IFNL2Q8IZJ0 200 aa19■□□□□ 0.63
COMMD2-206ENST00000490008 PCDH11XQ9BZA7 1347 aa19■□□□□ 0.63
COMMD2-206ENST00000490008 PCDH11YQ9BZA8 1340 aa19■□□□□ 0.63
COMMD2-206ENST00000490008 ZNF530Q6P9A1 599 aaPredicted RBP18.99■□□□□ 0.63
COMMD2-206ENST00000490008 SF3B2Q13435 895 aaKnown RBP18.98■□□□□ 0.63
COMMD2-206ENST00000490008 RSPH6AQ9H0K4 717 aa18.98■□□□□ 0.63
COMMD2-206ENST00000490008 OVOS2A0A0G2JMS6 1433 aa18.98■□□□□ 0.63
COMMD2-206ENST00000490008 COL3A1P02461 1466 aaPredicted RBP18.97■□□□□ 0.63
COMMD2-206ENST00000490008 KDRP35968 1356 aa18.97■□□□□ 0.63
COMMD2-206ENST00000490008 MEGF6O75095 1541 aa18.97■□□□□ 0.63
COMMD2-206ENST00000490008 HSP90AB1P08238 724 aaKnown RBP18.97■□□□□ 0.63
COMMD2-206ENST00000490008 CCDC184Q52MB2 194 aa18.97■□□□□ 0.63
COMMD2-206ENST00000490008 ADAMTS8Q9UP79 889 aa18.97■□□□□ 0.63
COMMD2-206ENST00000490008 FAM208AQ9UK61 1670 aaKnown RBP18.97■□□□□ 0.63
COMMD2-206ENST00000490008 CYP27B1O15528 508 aa18.96■□□□□ 0.63
COMMD2-206ENST00000490008 GAS2L2Q8NHY3 880 aa18.96■□□□□ 0.63
COMMD2-206ENST00000490008 MAPK8IP3Q9UPT6 1336 aa18.96■□□□□ 0.63
COMMD2-206ENST00000490008 NCAPD2Q15021 1401 aa18.95■□□□□ 0.62
COMMD2-206ENST00000490008 PHKG2P15735 406 aa18.95■□□□□ 0.62
COMMD2-206ENST00000490008 MTHFSDQ2M296 383 aaKnown RBP18.95■□□□□ 0.62
COMMD2-206ENST00000490008 CCDC125Q86Z20 511 aa18.95■□□□□ 0.62
COMMD2-206ENST00000490008 SYTL4Q96C24 671 aaPredicted RBP18.95■□□□□ 0.62
COMMD2-206ENST00000490008 ACSBG1Q96GR2 724 aa18.95■□□□□ 0.62
COMMD2-206ENST00000490008 PHACTR3Q96KR7 559 aa18.95■□□□□ 0.62
COMMD2-206ENST00000490008 TNS2Q63HR2 1409 aa18.94■□□□□ 0.62
COMMD2-206ENST00000490008 TRIM37O94972 964 aa18.94■□□□□ 0.62
COMMD2-206ENST00000490008 MIER1Q8N108 512 aa18.94■□□□□ 0.62
COMMD2-206ENST00000490008 AKAP4Q5JQC9 854 aa18.93■□□□□ 0.62
COMMD2-206ENST00000490008 PNISRQ8TF01 805 aaKnown RBP18.93■□□□□ 0.62
COMMD2-206ENST00000490008 PLEKHG2Q9H7P9 1386 aa18.93■□□□□ 0.62
COMMD2-206ENST00000490008 RGPD2P0DJD1 1756 aa18.92■□□□□ 0.62
COMMD2-206ENST00000490008 CCER2I3L3R5 266 aa18.92■□□□□ 0.62
COMMD2-206ENST00000490008 NKX1-1Q15270 411 aaPredicted RBP18.92■□□□□ 0.62
COMMD2-206ENST00000490008 FAM9BQ8IZU0 186 aa18.92■□□□□ 0.62
COMMD2-206ENST00000490008 RUNDC1Q96C34 613 aa18.92■□□□□ 0.62
COMMD2-206ENST00000490008 DCAF5Q96JK2 942 aa18.92■□□□□ 0.62
COMMD2-206ENST00000490008 THSD7AQ9UPZ6 1657 aa18.92■□□□□ 0.62
COMMD2-206ENST00000490008 PRIM1P49642 420 aaKnown RBP18.91■□□□□ 0.62
COMMD2-206ENST00000490008 MPRIPQ6WCQ1 1025 aa18.91■□□□□ 0.62
COMMD2-206ENST00000490008 CCDC146Q8IYE0 955 aa18.91■□□□□ 0.62
COMMD2-206ENST00000490008 RTF1Q92541 710 aaKnown RBP18.91■□□□□ 0.62
COMMD2-206ENST00000490008 UPF1Q92900 1129 aaKnown RBP eCLIP18.91■□□□□ 0.62
COMMD2-206ENST00000490008 BCL11BQ9C0K0 894 aaPredicted RBP18.91■□□□□ 0.62
COMMD2-206ENST00000490008 GNAT3A8MTJ3 354 aa18.9■□□□□ 0.62
COMMD2-206ENST00000490008 APBA3O96018 575 aa18.9■□□□□ 0.62
COMMD2-206ENST00000490008 PLEKHF1Q96S99 279 aa18.9■□□□□ 0.62
COMMD2-206ENST00000490008 SOCS7O14512 581 aa18.89■□□□□ 0.61
COMMD2-206ENST00000490008 KCNQ2O43526 872 aa18.89■□□□□ 0.61
COMMD2-206ENST00000490008 CABP4P57796 275 aa18.88■□□□□ 0.61
COMMD2-206ENST00000490008 ERVV-2B6SEH9 535 aa18.87■□□□□ 0.61
COMMD2-206ENST00000490008 NFE2L2Q16236 605 aa18.87■□□□□ 0.61
COMMD2-206ENST00000490008 PARP4Q9UKK3 1724 aaKnown RBP18.87■□□□□ 0.61
COMMD2-206ENST00000490008 BAG6P46379 1132 aa18.86■□□□□ 0.61
COMMD2-206ENST00000490008 RIPK4P57078 832 aa18.86■□□□□ 0.61
COMMD2-206ENST00000490008 NEUROD2Q15784 382 aa18.86■□□□□ 0.61
COMMD2-206ENST00000490008 LGR6Q9HBX8 967 aa18.86■□□□□ 0.61
COMMD2-206ENST00000490008 TMOD3Q9NYL9 352 aa18.86■□□□□ 0.61
COMMD2-206ENST00000490008 RNMTO43148 476 aaKnown RBP18.85■□□□□ 0.61
COMMD2-206ENST00000490008 HTATSF1O43719 755 aaKnown RBP18.85■□□□□ 0.61
COMMD2-206ENST00000490008 BCL9O00512 1426 aa18.84■□□□□ 0.61
COMMD2-206ENST00000490008 RGPD1P0DJD0 1748 aa18.84■□□□□ 0.61
COMMD2-206ENST00000490008 LRRC37A3O60309 1634 aa18.83■□□□□ 0.61
COMMD2-206ENST00000490008 TMPOP42166 694 aaKnown RBP18.83■□□□□ 0.6
COMMD2-206ENST00000490008 TEFQ10587 303 aa18.83■□□□□ 0.6
COMMD2-206ENST00000490008 PTF1AQ7RTS3 328 aa18.83■□□□□ 0.6
COMMD2-206ENST00000490008 NFATC2IPQ8NCF5 419 aa18.83■□□□□ 0.6
COMMD2-206ENST00000490008 RRP7AQ9Y3A4 280 aaKnown RBP18.83■□□□□ 0.6
COMMD2-206ENST00000490008 BRWD3Q6RI45 1802 aa18.83■□□□□ 0.6
COMMD2-206ENST00000490008 APAF1O14727 1248 aa18.82■□□□□ 0.6
COMMD2-206ENST00000490008 LMOD3Q0VAK6 560 aa18.82■□□□□ 0.6
COMMD2-206ENST00000490008 IL17REQ8NFR9 667 aa18.82■□□□□ 0.6
COMMD2-206ENST00000490008 MAP3K5Q99683 1374 aa18.81■□□□□ 0.6
COMMD2-206ENST00000490008 MCM10Q7L590 875 aa18.81■□□□□ 0.6
COMMD2-206ENST00000490008 PIGBQ92521 554 aa18.81■□□□□ 0.6
COMMD2-206ENST00000490008 EN1Q05925 392 aaPredicted RBP18.8■□□□□ 0.6
COMMD2-206ENST00000490008 SMARCC1Q92922 1105 aaPredicted RBP18.8■□□□□ 0.6
COMMD2-206ENST00000490008 SLC52A2Q9HAB3 445 aa18.8■□□□□ 0.6
COMMD2-206ENST00000490008 PLSCR1O15162 318 aa18.79■□□□□ 0.6
COMMD2-206ENST00000490008 DCTN1Q14203 1278 aa18.79■□□□□ 0.6
COMMD2-206ENST00000490008 DEFB132Q7Z7B7 95 aa18.79■□□□□ 0.6
COMMD2-206ENST00000490008 WNK3Q9BYP7 1800 aa18.77■□□□□ 0.6
COMMD2-206ENST00000490008 TAF7Q15545 349 aaPredicted RBP18.76■□□□□ 0.59
COMMD2-206ENST00000490008 EZH2Q15910 746 aaKnown RBP18.76■□□□□ 0.59
COMMD2-206ENST00000490008 SENP3-EIF4A1A0A087X0R7 540 aa18.75■□□□□ 0.59
COMMD2-206ENST00000490008 BTBD11A6QL63 1104 aa18.75■□□□□ 0.59
COMMD2-206ENST00000490008 HMGB2P26583 209 aaKnown RBP18.75■□□□□ 0.59
COMMD2-206ENST00000490008 CAMKK2Q96RR4 588 aa18.75■□□□□ 0.59
COMMD2-206ENST00000490008 ASAP1Q9ULH1 1129 aa18.75■□□□□ 0.59
COMMD2-206ENST00000490008 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
COMMD2-206ENST00000490008 TTC5Q8N0Z6 440 aa18.74■□□□□ 0.59
COMMD2-206ENST00000490008 RBM42Q9BTD8 480 aaKnown RBP18.74■□□□□ 0.59
COMMD2-206ENST00000490008 ATG3Q9NT62 314 aa18.74■□□□□ 0.59
COMMD2-206ENST00000490008 PKD1L3Q7Z443 1732 aa18.74■□□□□ 0.59
COMMD2-206ENST00000490008 KDM6AO15550 1401 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms