RNA–Protein interactions for RNA: ENST00000489912.1

LSM10-203, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-203ENST00000489912 PTF1AQ7RTS3 328 aa30.83■■■□□ 2.53
LSM10-203ENST00000489912 MTHFSP49914 203 aa30.82■■■□□ 2.52
LSM10-203ENST00000489912 EZH2Q15910 746 aaKnown RBP30.81■■■□□ 2.52
LSM10-203ENST00000489912 BCL9O00512 1426 aa30.8■■■□□ 2.52
LSM10-203ENST00000489912 BCL11BQ9C0K0 894 aaPredicted RBP30.79■■■□□ 2.52
LSM10-203ENST00000489912 NHSQ6T4R5 1651 aa30.78■■■□□ 2.52
LSM10-203ENST00000489912 KCNQ2O43526 872 aa30.78■■■□□ 2.52
LSM10-203ENST00000489912 NCAPD2Q15021 1401 aa30.78■■■□□ 2.52
LSM10-203ENST00000489912 CAMKK2Q96RR4 588 aa30.75■■■□□ 2.51
LSM10-203ENST00000489912 PKD1L3Q7Z443 1732 aa30.75■■■□□ 2.51
LSM10-203ENST00000489912 DOT1LQ8TEK3 1739 aa30.75■■■□□ 2.51
LSM10-203ENST00000489912 IGSF1Q8N6C5 1336 aa30.74■■■□□ 2.51
LSM10-203ENST00000489912 DDX10Q13206 875 aaKnown RBP30.74■■■□□ 2.51
LSM10-203ENST00000489912 PCDH11XQ9BZA7 1347 aa30.73■■■□□ 2.51
LSM10-203ENST00000489912 PCDH11YQ9BZA8 1340 aa30.73■■■□□ 2.51
LSM10-203ENST00000489912 IL13P35225 146 aa30.72■■■□□ 2.51
LSM10-203ENST00000489912 BTAF1O14981 1849 aa30.72■■■□□ 2.51
LSM10-203ENST00000489912 SYTL4Q96C24 671 aaPredicted RBP30.71■■■□□ 2.51
LSM10-203ENST00000489912 AEBP1Q8IUX7 1158 aa30.7■■■□□ 2.51
LSM10-203ENST00000489912 RREB1Q92766 1687 aa30.7■■■□□ 2.5
LSM10-203ENST00000489912 SPG7Q9UQ90 795 aa30.69■■■□□ 2.5
LSM10-203ENST00000489912 SULT6B1Q6IMI4 303 aa30.68■■■□□ 2.5
LSM10-203ENST00000489912 PARD3Q8TEW0 1356 aa30.67■■■□□ 2.5
LSM10-203ENST00000489912 NUP188Q5SRE5 1749 aa30.67■■■□□ 2.5
LSM10-203ENST00000489912 CYP27B1O15528 508 aa30.67■■■□□ 2.5
LSM10-203ENST00000489912 DIAPH1O60610 1272 aaKnown RBP30.67■■■□□ 2.5
LSM10-203ENST00000489912 RGPD3A6NKT7 1758 aaPredicted RBP30.66■■■□□ 2.5
LSM10-203ENST00000489912 RGPD4Q7Z3J3 1758 aa30.66■■■□□ 2.5
LSM10-203ENST00000489912 PRIM1P49642 420 aaKnown RBP30.66■■■□□ 2.5
LSM10-203ENST00000489912 PLSCR1O15162 318 aa30.64■■■□□ 2.5
LSM10-203ENST00000489912 PPP2R1AP30153 589 aa30.64■■■□□ 2.5
LSM10-203ENST00000489912 COL3A1P02461 1466 aaPredicted RBP30.63■■■□□ 2.49
LSM10-203ENST00000489912 PSDA5PKW4 1024 aaPredicted RBP30.62■■■□□ 2.49
LSM10-203ENST00000489912 HMOX1P09601 288 aa30.62■■■□□ 2.49
LSM10-203ENST00000489912 CFAP53Q96M91 514 aa30.61■■■□□ 2.49
LSM10-203ENST00000489912 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.61■■■□□ 2.49
LSM10-203ENST00000489912 U2SURPO15042 1029 aaKnown RBP30.6■■■□□ 2.49
LSM10-203ENST00000489912 TOGARAM1Q9Y4F4 1720 aa30.6■■■□□ 2.49
LSM10-203ENST00000489912 PLEKHO1Q53GL0 409 aaPredicted RBP30.59■■■□□ 2.49
LSM10-203ENST00000489912 ITGB4P16144 1822 aa30.59■■■□□ 2.49
LSM10-203ENST00000489912 IFNL2Q8IZJ0 200 aa30.58■■■□□ 2.49
LSM10-203ENST00000489912 KDRP35968 1356 aa30.57■■■□□ 2.48
LSM10-203ENST00000489912 PHKG2P15735 406 aa30.57■■■□□ 2.48
LSM10-203ENST00000489912 R3HDM1Q15032 1099 aaKnown RBP30.57■■■□□ 2.48
LSM10-203ENST00000489912 TXNRD1Q16881 649 aa30.57■■■□□ 2.48
LSM10-203ENST00000489912 ZNF530Q6P9A1 599 aaPredicted RBP30.56■■■□□ 2.48
LSM10-203ENST00000489912 PROM2Q8N271 834 aa30.56■■■□□ 2.48
LSM10-203ENST00000489912 NBPF14Q5TI25 921 aa30.55■■■□□ 2.48
LSM10-203ENST00000489912 MPRIPQ6WCQ1 1025 aa30.55■■■□□ 2.48
LSM10-203ENST00000489912 AMOTQ4VCS5 1084 aa30.54■■■□□ 2.48
LSM10-203ENST00000489912 NKX1-1Q15270 411 aaPredicted RBP30.52■■■□□ 2.48
LSM10-203ENST00000489912 PLEKHG2Q9H7P9 1386 aa30.52■■■□□ 2.48
LSM10-203ENST00000489912 C1orf141Q5JVX7 400 aa30.5■■■□□ 2.47
LSM10-203ENST00000489912 NUDCQ9Y266 331 aa30.48■■■□□ 2.47
LSM10-203ENST00000489912 ANO8Q9HCE9 1232 aaPredicted RBP30.47■■■□□ 2.47
LSM10-203ENST00000489912 LY75O60449 1722 aa30.47■■■□□ 2.47
LSM10-203ENST00000489912 ZNF316A6NFI3 1004 aaPredicted RBP30.46■■■□□ 2.47
LSM10-203ENST00000489912 KCNQ4P56696 695 aa30.46■■■□□ 2.47
LSM10-203ENST00000489912 RALBP1Q15311 655 aa30.46■■■□□ 2.47
LSM10-203ENST00000489912 HSP90AB1P08238 724 aaKnown RBP30.45■■■□□ 2.47
LSM10-203ENST00000489912 PIGBQ92521 554 aa30.45■■■□□ 2.47
LSM10-203ENST00000489912 TMOD3Q9NYL9 352 aa30.45■■■□□ 2.47
LSM10-203ENST00000489912 U2AF1L5P0DN76 240 aaPredicted RBP30.44■■■□□ 2.46
LSM10-203ENST00000489912 U2AF1Q01081 240 aaKnown RBP eCLIP30.44■■■□□ 2.46
LSM10-203ENST00000489912 DCAF5Q96JK2 942 aa30.43■■■□□ 2.46
LSM10-203ENST00000489912 LRRC4BQ9NT99 713 aa30.43■■■□□ 2.46
LSM10-203ENST00000489912 VIRMAQ69YN4 1812 aaKnown RBP30.43■■■□□ 2.46
LSM10-203ENST00000489912 STK32BQ9NY57 414 aa30.42■■■□□ 2.46
LSM10-203ENST00000489912 KDM6AO15550 1401 aaPredicted RBP30.41■■■□□ 2.46
LSM10-203ENST00000489912 MTHFSDQ2M296 383 aaKnown RBP30.41■■■□□ 2.46
LSM10-203ENST00000489912 CCNL1Q9UK58 526 aaPredicted RBP30.4■■■□□ 2.46
LSM10-203ENST00000489912 PALLDQ8WX93 1383 aa30.4■■■□□ 2.46
LSM10-203ENST00000489912 SCN11AQ9UI33 1791 aa30.39■■■□□ 2.46
LSM10-203ENST00000489912 PRKAR2BP31323 418 aa30.39■■■□□ 2.46
LSM10-203ENST00000489912 SLC27A3Q5K4L6 730 aa30.39■■■□□ 2.46
LSM10-203ENST00000489912 PAPPAQ13219 1627 aa30.38■■■□□ 2.45
LSM10-203ENST00000489912 AKAP4Q5JQC9 854 aa30.38■■■□□ 2.45
LSM10-203ENST00000489912 ERVV-2B6SEH9 535 aa30.37■■■□□ 2.45
LSM10-203ENST00000489912 CABP4P57796 275 aa30.37■■■□□ 2.45
LSM10-203ENST00000489912 RSPH6AQ9H0K4 717 aa30.37■■■□□ 2.45
LSM10-203ENST00000489912 SMARCC1Q92922 1105 aaPredicted RBP30.36■■■□□ 2.45
LSM10-203ENST00000489912 ASAP1Q9ULH1 1129 aa30.36■■■□□ 2.45
LSM10-203ENST00000489912 MYBBP1AQ9BQG0 1328 aaKnown RBP30.36■■■□□ 2.45
LSM10-203ENST00000489912 SLC15A2Q16348 729 aa30.35■■■□□ 2.45
LSM10-203ENST00000489912 ZNF827Q17R98 1081 aa30.33■■■□□ 2.45
LSM10-203ENST00000489912 PHACTR3Q96KR7 559 aa30.32■■■□□ 2.44
LSM10-203ENST00000489912 LGR6Q9HBX8 967 aa30.32■■■□□ 2.44
LSM10-203ENST00000489912 C5P01031 1676 aa30.32■■■□□ 2.44
LSM10-203ENST00000489912 TAF1LQ8IZX4 1826 aa30.31■■■□□ 2.44
LSM10-203ENST00000489912 GAS2L2Q8NHY3 880 aa30.31■■■□□ 2.44
LSM10-203ENST00000489912 NFATC2IPQ8NCF5 419 aa30.3■■■□□ 2.44
LSM10-203ENST00000489912 PDGFDQ9GZP0 370 aaPredicted RBP30.3■■■□□ 2.44
LSM10-203ENST00000489912 PRKRIP1Q9H875 184 aaPredicted RBP30.3■■■□□ 2.44
LSM10-203ENST00000489912 ATG3Q9NT62 314 aa30.3■■■□□ 2.44
LSM10-203ENST00000489912 RNMTO43148 476 aaKnown RBP30.29■■■□□ 2.44
LSM10-203ENST00000489912 FCHSD2O94868 740 aa30.29■■■□□ 2.44
LSM10-203ENST00000489912 TUBGCP6Q96RT7 1819 aa30.29■■■□□ 2.44
LSM10-203ENST00000489912 CASZ1Q86V15 1759 aa30.28■■■□□ 2.44
LSM10-203ENST00000489912 MAP3K5Q99683 1374 aa30.28■■■□□ 2.44
LSM10-203ENST00000489912 SRCAPQ6ZRS2 3230 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms