RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 NPC1L1Q9UHC9 1359 aa26.02■■□□□ 1.76
EPHB4-207ENST00000489808 TNS1Q9HBL0 1735 aaKnown RBP26.02■■□□□ 1.76
EPHB4-207ENST00000489808 RGPD2P0DJD1 1756 aa26■■□□□ 1.75
EPHB4-207ENST00000489808 MTHFSP49914 203 aa25.99■■□□□ 1.75
EPHB4-207ENST00000489808 NCAPD2Q15021 1401 aa25.98■■□□□ 1.75
EPHB4-207ENST00000489808 CNGB1Q14028 1251 aaPredicted RBP25.98■■□□□ 1.75
EPHB4-207ENST00000489808 PROM2Q8N271 834 aa25.97■■□□□ 1.75
EPHB4-207ENST00000489808 IGSF1Q8N6C5 1336 aa25.95■■□□□ 1.75
EPHB4-207ENST00000489808 PRIM1P49642 420 aaKnown RBP25.95■■□□□ 1.74
EPHB4-207ENST00000489808 IL13P35225 146 aa25.94■■□□□ 1.74
EPHB4-207ENST00000489808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.94■■□□□ 1.74
EPHB4-207ENST00000489808 SBF2Q86WG5 1849 aa25.93■■□□□ 1.74
EPHB4-207ENST00000489808 PCDH11XQ9BZA7 1347 aa25.93■■□□□ 1.74
EPHB4-207ENST00000489808 PCDH11YQ9BZA8 1340 aa25.93■■□□□ 1.74
EPHB4-207ENST00000489808 CYP27B1O15528 508 aa25.93■■□□□ 1.74
EPHB4-207ENST00000489808 NBPF14Q5TI25 921 aa25.93■■□□□ 1.74
EPHB4-207ENST00000489808 SPG7Q9UQ90 795 aa25.93■■□□□ 1.74
EPHB4-207ENST00000489808 PSDA5PKW4 1024 aaPredicted RBP25.92■■□□□ 1.74
EPHB4-207ENST00000489808 R3HDM1Q15032 1099 aaKnown RBP25.92■■□□□ 1.74
EPHB4-207ENST00000489808 TXNRD1Q16881 649 aa25.91■■□□□ 1.74
EPHB4-207ENST00000489808 SYTL4Q96C24 671 aaPredicted RBP25.9■■□□□ 1.74
EPHB4-207ENST00000489808 ZEB1P37275 1124 aaPredicted RBP25.88■■□□□ 1.73
EPHB4-207ENST00000489808 NKX1-1Q15270 411 aaPredicted RBP25.88■■□□□ 1.73
EPHB4-207ENST00000489808 SULT6B1Q6IMI4 303 aa25.86■■□□□ 1.73
EPHB4-207ENST00000489808 AEBP1Q8IUX7 1158 aa25.86■■□□□ 1.73
EPHB4-207ENST00000489808 DIAPH1O60610 1272 aaKnown RBP25.85■■□□□ 1.73
EPHB4-207ENST00000489808 NHSQ6T4R5 1651 aa25.84■■□□□ 1.73
EPHB4-207ENST00000489808 PLEKHO1Q53GL0 409 aaPredicted RBP25.84■■□□□ 1.73
EPHB4-207ENST00000489808 IFNL2Q8IZJ0 200 aa25.84■■□□□ 1.73
EPHB4-207ENST00000489808 PLEKHG2Q9H7P9 1386 aa25.83■■□□□ 1.73
EPHB4-207ENST00000489808 PHKG2P15735 406 aa25.83■■□□□ 1.73
EPHB4-207ENST00000489808 AMOTQ4VCS5 1084 aa25.82■■□□□ 1.72
EPHB4-207ENST00000489808 SHANK3Q9BYB0 1731 aa25.82■■□□□ 1.72
EPHB4-207ENST00000489808 ANO8Q9HCE9 1232 aaPredicted RBP25.81■■□□□ 1.72
EPHB4-207ENST00000489808 SRCAPQ6ZRS2 3230 aa25.81■■□□□ 1.72
EPHB4-207ENST00000489808 RREB1Q92766 1687 aa25.8■■□□□ 1.72
EPHB4-207ENST00000489808 MPRIPQ6WCQ1 1025 aa25.8■■□□□ 1.72
EPHB4-207ENST00000489808 KDRP35968 1356 aa25.8■■□□□ 1.72
EPHB4-207ENST00000489808 PPP2R1AP30153 589 aa25.79■■□□□ 1.72
EPHB4-207ENST00000489808 LRRC4BQ9NT99 713 aa25.79■■□□□ 1.72
EPHB4-207ENST00000489808 KAT6BQ8WYB5 2073 aa25.79■■□□□ 1.72
EPHB4-207ENST00000489808 RGPD3A6NKT7 1758 aaPredicted RBP25.78■■□□□ 1.72
EPHB4-207ENST00000489808 RGPD4Q7Z3J3 1758 aa25.78■■□□□ 1.72
EPHB4-207ENST00000489808 SLC27A3Q5K4L6 730 aa25.78■■□□□ 1.72
EPHB4-207ENST00000489808 HMOX1P09601 288 aa25.77■■□□□ 1.72
EPHB4-207ENST00000489808 DDX10Q13206 875 aaKnown RBP25.77■■□□□ 1.72
EPHB4-207ENST00000489808 ZNF530Q6P9A1 599 aaPredicted RBP25.76■■□□□ 1.71
EPHB4-207ENST00000489808 PIGBQ92521 554 aa25.76■■□□□ 1.71
EPHB4-207ENST00000489808 STK32BQ9NY57 414 aa25.76■■□□□ 1.71
EPHB4-207ENST00000489808 PKD1L3Q7Z443 1732 aa25.76■■□□□ 1.71
EPHB4-207ENST00000489808 NUP188Q5SRE5 1749 aa25.75■■□□□ 1.71
EPHB4-207ENST00000489808 HSP90AB1P08238 724 aaKnown RBP25.75■■□□□ 1.71
EPHB4-207ENST00000489808 SLC15A2Q16348 729 aa25.75■■□□□ 1.71
EPHB4-207ENST00000489808 CFAP53Q96M91 514 aa25.75■■□□□ 1.71
EPHB4-207ENST00000489808 BTAF1O14981 1849 aa25.74■■□□□ 1.71
EPHB4-207ENST00000489808 DCAF5Q96JK2 942 aa25.73■■□□□ 1.71
EPHB4-207ENST00000489808 U2SURPO15042 1029 aaKnown RBP25.72■■□□□ 1.71
EPHB4-207ENST00000489808 KCNQ4P56696 695 aa25.72■■□□□ 1.71
EPHB4-207ENST00000489808 ERVV-2B6SEH9 535 aa25.71■■□□□ 1.71
EPHB4-207ENST00000489808 C1orf141Q5JVX7 400 aa25.71■■□□□ 1.71
EPHB4-207ENST00000489808 TMOD3Q9NYL9 352 aa25.71■■□□□ 1.71
EPHB4-207ENST00000489808 COL3A1P02461 1466 aaPredicted RBP25.71■■□□□ 1.71
EPHB4-207ENST00000489808 DOT1LQ8TEK3 1739 aa25.71■■□□□ 1.71
EPHB4-207ENST00000489808 SMARCC1Q92922 1105 aaPredicted RBP25.7■■□□□ 1.7
EPHB4-207ENST00000489808 CCNL1Q9UK58 526 aaPredicted RBP25.7■■□□□ 1.7
EPHB4-207ENST00000489808 AKT1S1Q96B36 256 aa25.68■■□□□ 1.7
EPHB4-207ENST00000489808 NUDCQ9Y266 331 aa25.68■■□□□ 1.7
EPHB4-207ENST00000489808 ZNF827Q17R98 1081 aa25.67■■□□□ 1.7
EPHB4-207ENST00000489808 AKAP4Q5JQC9 854 aa25.67■■□□□ 1.7
EPHB4-207ENST00000489808 PDGFDQ9GZP0 370 aaPredicted RBP25.67■■□□□ 1.7
EPHB4-207ENST00000489808 PALLDQ8WX93 1383 aa25.67■■□□□ 1.7
EPHB4-207ENST00000489808 MTHFSDQ2M296 383 aaKnown RBP25.66■■□□□ 1.7
EPHB4-207ENST00000489808 ASAP1Q9ULH1 1129 aa25.65■■□□□ 1.7
EPHB4-207ENST00000489808 CABP4P57796 275 aa25.64■■□□□ 1.7
EPHB4-207ENST00000489808 RALBP1Q15311 655 aa25.64■■□□□ 1.7
EPHB4-207ENST00000489808 ATG3Q9NT62 314 aa25.64■■□□□ 1.7
EPHB4-207ENST00000489808 HMGB2P26583 209 aaKnown RBP25.63■■□□□ 1.69
EPHB4-207ENST00000489808 KDM6AO15550 1401 aaPredicted RBP25.63■■□□□ 1.69
EPHB4-207ENST00000489808 SPON1Q9HCB6 807 aa25.62■■□□□ 1.69
EPHB4-207ENST00000489808 TOGARAM1Q9Y4F4 1720 aa25.62■■□□□ 1.69
EPHB4-207ENST00000489808 U2AF1L5P0DN76 240 aaPredicted RBP25.61■■□□□ 1.69
EPHB4-207ENST00000489808 U2AF1Q01081 240 aaKnown RBP eCLIP25.61■■□□□ 1.69
EPHB4-207ENST00000489808 LOC102724428A0A0B4J2F2 783 aa25.6■■□□□ 1.69
EPHB4-207ENST00000489808 SIK1P57059 783 aa25.6■■□□□ 1.69
EPHB4-207ENST00000489808 NFATC2IPQ8NCF5 419 aa25.6■■□□□ 1.69
EPHB4-207ENST00000489808 RSPH6AQ9H0K4 717 aa25.6■■□□□ 1.69
EPHB4-207ENST00000489808 LGR6Q9HBX8 967 aa25.6■■□□□ 1.69
EPHB4-207ENST00000489808 TFCP2L1Q9NZI6 479 aa25.6■■□□□ 1.69
EPHB4-207ENST00000489808 RNMTO43148 476 aaKnown RBP25.58■■□□□ 1.69
EPHB4-207ENST00000489808 FCHSD2O94868 740 aa25.58■■□□□ 1.69
EPHB4-207ENST00000489808 ZBTB7AO95365 584 aa25.58■■□□□ 1.69
EPHB4-207ENST00000489808 PRKAR2BP31323 418 aa25.58■■□□□ 1.69
EPHB4-207ENST00000489808 PAPPAQ13219 1627 aa25.58■■□□□ 1.69
EPHB4-207ENST00000489808 GAS2L2Q8NHY3 880 aa25.57■■□□□ 1.68
EPHB4-207ENST00000489808 PHACTR3Q96KR7 559 aa25.57■■□□□ 1.68
EPHB4-207ENST00000489808 LY75O60449 1722 aa25.57■■□□□ 1.68
EPHB4-207ENST00000489808 ITGB4P16144 1822 aa25.56■■□□□ 1.68
EPHB4-207ENST00000489808 ATF5Q9Y2D1 282 aaPredicted RBP25.56■■□□□ 1.68
EPHB4-207ENST00000489808 SLC52A2Q9HAB3 445 aa25.55■■□□□ 1.68
EPHB4-207ENST00000489808 ATP6V1AP38606 617 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms