RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 TAF1LQ8IZX4 1826 aa14.2□□□□□ -0.14
CSF3R-213ENST00000489551 FYB1O15117 783 aa14.2□□□□□ -0.14
CSF3R-213ENST00000489551 PRIM1P49642 420 aaKnown RBP14.2□□□□□ -0.14
CSF3R-213ENST00000489551 NBPF6Q5VWK0 638 aa14.2□□□□□ -0.14
CSF3R-213ENST00000489551 NBPF4Q96M43 638 aa14.2□□□□□ -0.14
CSF3R-213ENST00000489551 ITGB4P16144 1822 aa14.2□□□□□ -0.14
CSF3R-213ENST00000489551 PNPLA7Q6ZV29 1317 aa14.19□□□□□ -0.14
CSF3R-213ENST00000489551 AMPHP49418 695 aa14.19□□□□□ -0.14
CSF3R-213ENST00000489551 ARXQ96QS3 562 aa14.19□□□□□ -0.14
CSF3R-213ENST00000489551 GGNBP2Q9H3C7 697 aa14.19□□□□□ -0.14
CSF3R-213ENST00000489551 TOGARAM1Q9Y4F4 1720 aa14.18□□□□□ -0.14
CSF3R-213ENST00000489551 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
CSF3R-213ENST00000489551 USHBP1Q8N6Y0 703 aa14.18□□□□□ -0.14
CSF3R-213ENST00000489551 ZCRB1Q8TBF4 217 aaKnown RBP14.18□□□□□ -0.14
CSF3R-213ENST00000489551 MAP3K5Q99683 1374 aa14.18□□□□□ -0.14
CSF3R-213ENST00000489551 SLC27A3Q5K4L6 730 aa14.17□□□□□ -0.14
CSF3R-213ENST00000489551 RTL1A6NKG5 1358 aa14.17□□□□□ -0.14
CSF3R-213ENST00000489551 MAP2P11137 1827 aaKnown RBP14.17□□□□□ -0.14
CSF3R-213ENST00000489551 ZNF784Q8NCA9 323 aaPredicted RBP14.16□□□□□ -0.14
CSF3R-213ENST00000489551 SYTL4Q96C24 671 aaPredicted RBP14.16□□□□□ -0.14
CSF3R-213ENST00000489551 USP47Q96K76 1375 aa14.16□□□□□ -0.14
CSF3R-213ENST00000489551 C5P01031 1676 aa14.16□□□□□ -0.14
CSF3R-213ENST00000489551 HSP90AB2PQ58FF8 381 aa14.15□□□□□ -0.14
CSF3R-213ENST00000489551 PKD1L3Q7Z443 1732 aa14.15□□□□□ -0.14
CSF3R-213ENST00000489551 ANKRD26Q9UPS8 1709 aa14.15□□□□□ -0.14
CSF3R-213ENST00000489551 CARD14Q9BXL6 1004 aa14.14□□□□□ -0.15
CSF3R-213ENST00000489551 TMF1P82094 1093 aa14.13□□□□□ -0.15
CSF3R-213ENST00000489551 SLC16A10Q8TF71 515 aa14.13□□□□□ -0.15
CSF3R-213ENST00000489551 INSRP06213 1382 aa14.12□□□□□ -0.15
CSF3R-213ENST00000489551 SLC24A1O60721 1099 aa14.12□□□□□ -0.15
CSF3R-213ENST00000489551 TFCP2L1Q9NZI6 479 aa14.12□□□□□ -0.15
CSF3R-213ENST00000489551 UBR3Q6ZT12 1888 aa14.11□□□□□ -0.15
CSF3R-213ENST00000489551 COL23A1Q86Y22 540 aaPredicted RBP14.11□□□□□ -0.15
CSF3R-213ENST00000489551 NLGN2Q8NFZ4 835 aa14.11□□□□□ -0.15
CSF3R-213ENST00000489551 CCNL1Q9UK58 526 aaPredicted RBP14.11□□□□□ -0.15
CSF3R-213ENST00000489551 EMILIN1Q9Y6C2 1016 aa14.11□□□□□ -0.15
CSF3R-213ENST00000489551 NCAPD2Q15021 1401 aa14.1□□□□□ -0.15
CSF3R-213ENST00000489551 CYP27B1O15528 508 aa14.1□□□□□ -0.15
CSF3R-213ENST00000489551 CGNL1Q0VF96 1302 aa14.1□□□□□ -0.15
CSF3R-213ENST00000489551 FLT4P35916 1363 aa14.09□□□□□ -0.15
CSF3R-213ENST00000489551 TATP17735 454 aaPredicted RBP14.09□□□□□ -0.15
CSF3R-213ENST00000489551 C4BP0C0L5 1744 aa14.09□□□□□ -0.15
CSF3R-213ENST00000489551 NSD3Q9BZ95 1437 aa14.08□□□□□ -0.15
CSF3R-213ENST00000489551 AMIGO3Q86WK7 504 aa14.08□□□□□ -0.16
CSF3R-213ENST00000489551 KLHL34Q8N239 644 aa14.08□□□□□ -0.16
CSF3R-213ENST00000489551 RAPGEF4Q8WZA2 1011 aa14.08□□□□□ -0.16
CSF3R-213ENST00000489551 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.16
CSF3R-213ENST00000489551 SMG6Q86US8 1419 aaKnown RBP14.07□□□□□ -0.16
CSF3R-213ENST00000489551 POLD1P28340 1107 aa14.07□□□□□ -0.16
CSF3R-213ENST00000489551 GPR162Q16538 588 aa14.07□□□□□ -0.16
CSF3R-213ENST00000489551 PCDH11XQ9BZA7 1347 aa14.07□□□□□ -0.16
CSF3R-213ENST00000489551 PCDH11YQ9BZA8 1340 aa14.07□□□□□ -0.16
CSF3R-213ENST00000489551 YBX3P16989 372 aaKnown RBP eCLIP14.06□□□□□ -0.16
CSF3R-213ENST00000489551 TRIM26Q12899 539 aaPredicted RBP14.06□□□□□ -0.16
CSF3R-213ENST00000489551 MSL1Q68DK7 614 aa14.06□□□□□ -0.16
CSF3R-213ENST00000489551 SMIM5Q71RC9 77 aa14.06□□□□□ -0.16
CSF3R-213ENST00000489551 PALLDQ8WX93 1383 aa14.06□□□□□ -0.16
CSF3R-213ENST00000489551 MPRIPQ6WCQ1 1025 aa14.05□□□□□ -0.16
CSF3R-213ENST00000489551 PIGBQ92521 554 aa14.04□□□□□ -0.16
CSF3R-213ENST00000489551 MSH5O43196 834 aa14.03□□□□□ -0.16
CSF3R-213ENST00000489551 NKX1-1Q15270 411 aaPredicted RBP14.03□□□□□ -0.16
CSF3R-213ENST00000489551 CDCA8Q53HL2 280 aa14.03□□□□□ -0.16
CSF3R-213ENST00000489551 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
CSF3R-213ENST00000489551 EYA1Q99502 592 aa14.03□□□□□ -0.16
CSF3R-213ENST00000489551 WASHC2AQ641Q2 1341 aa14.02□□□□□ -0.17
CSF3R-213ENST00000489551 POLKQ9UBT6 870 aa14.02□□□□□ -0.17
CSF3R-213ENST00000489551 PPM1GO15355 546 aaPredicted RBP14.01□□□□□ -0.17
CSF3R-213ENST00000489551 C1QTNF8P60827 252 aa14.01□□□□□ -0.17
CSF3R-213ENST00000489551 LINC00116Q8NCU8 138 aa13.99□□□□□ -0.17
CSF3R-213ENST00000489551 KIAA1551Q9HCM1 1747 aa13.98□□□□□ -0.17
CSF3R-213ENST00000489551 MYH14Q7Z406 1995 aaKnown RBP13.98□□□□□ -0.17
CSF3R-213ENST00000489551 CEP350Q5VT06 3117 aa13.98□□□□□ -0.17
CSF3R-213ENST00000489551 ITPK1Q13572 414 aa13.98□□□□□ -0.17
CSF3R-213ENST00000489551 EIF4A2Q14240 407 aaKnown RBP13.98□□□□□ -0.17
CSF3R-213ENST00000489551 ASAP1Q9ULH1 1129 aa13.98□□□□□ -0.17
CSF3R-213ENST00000489551 COL5A3P25940 1745 aaPredicted RBP13.98□□□□□ -0.17
CSF3R-213ENST00000489551 KIF13BQ9NQT8 1826 aa13.97□□□□□ -0.17
CSF3R-213ENST00000489551 PHKG2P15735 406 aa13.97□□□□□ -0.17
CSF3R-213ENST00000489551 FLAD1Q8NFF5 587 aa13.97□□□□□ -0.17
CSF3R-213ENST00000489551 SMARCC1Q92922 1105 aaPredicted RBP13.97□□□□□ -0.17
CSF3R-213ENST00000489551 ZNF831Q5JPB2 1677 aa13.96□□□□□ -0.17
CSF3R-213ENST00000489551 SENP3-EIF4A1A0A087X0R7 540 aa13.96□□□□□ -0.17
CSF3R-213ENST00000489551 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.96□□□□□ -0.17
CSF3R-213ENST00000489551 LOC102724428A0A0B4J2F2 783 aa13.96□□□□□ -0.17
CSF3R-213ENST00000489551 PHF14O94880 888 aa13.96□□□□□ -0.17
CSF3R-213ENST00000489551 SIK1P57059 783 aa13.96□□□□□ -0.17
CSF3R-213ENST00000489551 AK7Q96M32 723 aa13.96□□□□□ -0.17
CSF3R-213ENST00000489551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.17
CSF3R-213ENST00000489551 TIMELESSQ9UNS1 1208 aa13.96□□□□□ -0.17
CSF3R-213ENST00000489551 SPG7Q9UQ90 795 aa13.96□□□□□ -0.17
CSF3R-213ENST00000489551 CD2APQ9Y5K6 639 aa13.96□□□□□ -0.17
CSF3R-213ENST00000489551 N4BP2Q86UW6 1770 aaPredicted RBP13.96□□□□□ -0.18
CSF3R-213ENST00000489551 TNNT2P45379 298 aaPredicted RBP13.95□□□□□ -0.18
CSF3R-213ENST00000489551 SLC4A9Q96Q91 983 aa13.95□□□□□ -0.18
CSF3R-213ENST00000489551 ATG3Q9NT62 314 aa13.95□□□□□ -0.18
CSF3R-213ENST00000489551 VIRMAQ69YN4 1812 aaKnown RBP13.94□□□□□ -0.18
CSF3R-213ENST00000489551 GRIN3BO60391 1043 aa13.94□□□□□ -0.18
CSF3R-213ENST00000489551 IFNL2Q8IZJ0 200 aa13.94□□□□□ -0.18
CSF3R-213ENST00000489551 KDRP35968 1356 aa13.94□□□□□ -0.18
CSF3R-213ENST00000489551 IGSF1Q8N6C5 1336 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms