RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ACSBG1Q96GR2 724 aa13.57□□□□□ -0.24
SSBP1-212ENST00000489378 SLIT3O75094 1523 aa13.57□□□□□ -0.24
SSBP1-212ENST00000489378 EXOC5O00471 708 aa13.56□□□□□ -0.24
SSBP1-212ENST00000489378 LRRC4BQ9NT99 713 aa13.56□□□□□ -0.24
SSBP1-212ENST00000489378 COL24A1Q17RW2 1714 aa13.56□□□□□ -0.24
SSBP1-212ENST00000489378 POLD1P28340 1107 aa13.56□□□□□ -0.24
SSBP1-212ENST00000489378 NLRP6P59044 892 aa13.56□□□□□ -0.24
SSBP1-212ENST00000489378 ASTLQ6HA08 431 aaPredicted RBP13.56□□□□□ -0.24
SSBP1-212ENST00000489378 RASEFQ8IZ41 740 aa13.56□□□□□ -0.24
SSBP1-212ENST00000489378 CARD10Q9BWT7 1032 aa13.56□□□□□ -0.24
SSBP1-212ENST00000489378 RGPD5Q99666 1765 aa13.55□□□□□ -0.24
SSBP1-212ENST00000489378 KIF12Q96FN5 646 aa13.55□□□□□ -0.24
SSBP1-212ENST00000489378 GPBP1L1Q9HC44 474 aaPredicted RBP13.55□□□□□ -0.24
SSBP1-212ENST00000489378 BTAF1O14981 1849 aa13.55□□□□□ -0.24
SSBP1-212ENST00000489378 GRIN3BO60391 1043 aa13.54□□□□□ -0.24
SSBP1-212ENST00000489378 TNS2Q63HR2 1409 aa13.54□□□□□ -0.24
SSBP1-212ENST00000489378 PPIP5K1Q6PFW1 1433 aa13.54□□□□□ -0.24
SSBP1-212ENST00000489378 DCAF11Q8TEB1 546 aa13.54□□□□□ -0.24
SSBP1-212ENST00000489378 SLC16A10Q8TF71 515 aa13.54□□□□□ -0.24
SSBP1-212ENST00000489378 KAT6BQ8WYB5 2073 aa13.54□□□□□ -0.24
SSBP1-212ENST00000489378 PNPLA7Q6ZV29 1317 aa13.53□□□□□ -0.24
SSBP1-212ENST00000489378 USP6P35125 1406 aa13.53□□□□□ -0.24
SSBP1-212ENST00000489378 CPSF1Q10570 1443 aaKnown RBP13.53□□□□□ -0.24
SSBP1-212ENST00000489378 ATMINO43313 823 aaPredicted RBP13.53□□□□□ -0.24
SSBP1-212ENST00000489378 CSB-PGBD3P0DP91 1061 aa13.53□□□□□ -0.24
SSBP1-212ENST00000489378 ZNF526Q8TF50 670 aaPredicted RBP13.53□□□□□ -0.24
SSBP1-212ENST00000489378 QSER1Q2KHR3 1735 aa13.52□□□□□ -0.24
SSBP1-212ENST00000489378 TUBGCP6Q96RT7 1819 aa13.52□□□□□ -0.25
SSBP1-212ENST00000489378 BRD4O60885 1362 aaPredicted RBP13.52□□□□□ -0.25
SSBP1-212ENST00000489378 ARHGEF25Q86VW2 580 aa13.51□□□□□ -0.25
SSBP1-212ENST00000489378 ADCY9O60503 1353 aa13.51□□□□□ -0.25
SSBP1-212ENST00000489378 PIK3C2AO00443 1686 aa13.51□□□□□ -0.25
SSBP1-212ENST00000489378 ABCC6O95255 1503 aa13.5□□□□□ -0.25
SSBP1-212ENST00000489378 TRPM1Q7Z4N2 1603 aa13.5□□□□□ -0.25
SSBP1-212ENST00000489378 SRPK2P78362 688 aaKnown RBP13.49□□□□□ -0.25
SSBP1-212ENST00000489378 CABP2Q9NPB3 220 aa13.49□□□□□ -0.25
SSBP1-212ENST00000489378 SOX12O15370 315 aa13.48□□□□□ -0.25
SSBP1-212ENST00000489378 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
SSBP1-212ENST00000489378 CCDC7Q96M83 1385 aa13.48□□□□□ -0.25
SSBP1-212ENST00000489378 KCNQ4P56696 695 aa13.47□□□□□ -0.25
SSBP1-212ENST00000489378 PLCD3Q8N3E9 789 aa13.47□□□□□ -0.25
SSBP1-212ENST00000489378 TFCP2L1Q9NZI6 479 aa13.47□□□□□ -0.25
SSBP1-212ENST00000489378 CABP1Q9NZU7 370 aa13.47□□□□□ -0.25
SSBP1-212ENST00000489378 NUBP1P53384 320 aa13.46□□□□□ -0.26
SSBP1-212ENST00000489378 SLC27A3Q5K4L6 730 aa13.46□□□□□ -0.26
SSBP1-212ENST00000489378 TRPC6Q9Y210 931 aa13.46□□□□□ -0.26
SSBP1-212ENST00000489378 KIF3CO14782 793 aa13.45□□□□□ -0.26
SSBP1-212ENST00000489378 MAP3K13O43283 966 aa13.45□□□□□ -0.26
SSBP1-212ENST00000489378 DNAJC5GQ8N7S2 189 aa13.45□□□□□ -0.26
SSBP1-212ENST00000489378 STAC3Q96MF2 364 aa13.44□□□□□ -0.26
SSBP1-212ENST00000489378 NFAT5O94916 1531 aa13.44□□□□□ -0.26
SSBP1-212ENST00000489378 QRICH2Q9H0J4 1663 aa13.43□□□□□ -0.26
SSBP1-212ENST00000489378 APLP1P51693 650 aa13.43□□□□□ -0.26
SSBP1-212ENST00000489378 COL13A1Q5TAT6 717 aaPredicted RBP13.43□□□□□ -0.26
SSBP1-212ENST00000489378 MSL1Q68DK7 614 aa13.43□□□□□ -0.26
SSBP1-212ENST00000489378 KCNH5Q8NCM2 988 aa13.43□□□□□ -0.26
SSBP1-212ENST00000489378 IL2RBP14784 551 aa13.42□□□□□ -0.26
SSBP1-212ENST00000489378 ATN1P54259 1190 aaPredicted RBP13.42□□□□□ -0.26
SSBP1-212ENST00000489378 COL23A1Q86Y22 540 aaPredicted RBP13.42□□□□□ -0.26
SSBP1-212ENST00000489378 NLRP2Q9NX02 1062 aa13.42□□□□□ -0.26
SSBP1-212ENST00000489378 METRNQ9UJH8 293 aa13.41□□□□□ -0.26
SSBP1-212ENST00000489378 TTC21BQ7Z4L5 1316 aa13.41□□□□□ -0.26
SSBP1-212ENST00000489378 NBPF1Q3BBV0 1214 aa13.4□□□□□ -0.26
SSBP1-212ENST00000489378 SLC39A7Q92504 469 aa13.4□□□□□ -0.26
SSBP1-212ENST00000489378 BMP2KQ9NSY1 1161 aaPredicted RBP13.4□□□□□ -0.26
SSBP1-212ENST00000489378 ERBB3P21860 1342 aa13.4□□□□□ -0.26
SSBP1-212ENST00000489378 POTEJP0CG39 1038 aa13.39□□□□□ -0.27
SSBP1-212ENST00000489378 WWC3Q9ULE0 1092 aa13.39□□□□□ -0.27
SSBP1-212ENST00000489378 CD2APQ9Y5K6 639 aa13.39□□□□□ -0.27
SSBP1-212ENST00000489378 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
SSBP1-212ENST00000489378 LY75O60449 1722 aa13.39□□□□□ -0.27
SSBP1-212ENST00000489378 C7P10643 843 aa13.39□□□□□ -0.27
SSBP1-212ENST00000489378 KIAA1210Q9ULL0 1709 aa13.38□□□□□ -0.27
SSBP1-212ENST00000489378 DDX54Q8TDD1 881 aaKnown RBP13.38□□□□□ -0.27
SSBP1-212ENST00000489378 PRIM1P49642 420 aaKnown RBP13.37□□□□□ -0.27
SSBP1-212ENST00000489378 SYTL4Q96C24 671 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-212ENST00000489378 NSD2O96028 1365 aa13.37□□□□□ -0.27
SSBP1-212ENST00000489378 ZBTB47Q9UFB7 747 aaPredicted RBP13.36□□□□□ -0.27
SSBP1-212ENST00000489378 CCNL1Q9UK58 526 aaPredicted RBP13.36□□□□□ -0.27
SSBP1-212ENST00000489378 TTC21AQ8NDW8 1320 aa13.35□□□□□ -0.27
SSBP1-212ENST00000489378 DOT1LQ8TEK3 1739 aa13.35□□□□□ -0.27
SSBP1-212ENST00000489378 PRELPP51888 382 aa13.35□□□□□ -0.27
SSBP1-212ENST00000489378 ANKRD24Q8TF21 1146 aa13.35□□□□□ -0.27
SSBP1-212ENST00000489378 IGSF1Q8N6C5 1336 aa13.35□□□□□ -0.27
SSBP1-212ENST00000489378 ANKRD36BQ8N2N9 1353 aa13.34□□□□□ -0.27
SSBP1-212ENST00000489378 TOMM70O94826 608 aa13.34□□□□□ -0.27
SSBP1-212ENST00000489378 TIE1P35590 1138 aa13.34□□□□□ -0.27
SSBP1-212ENST00000489378 HTRA3P83110 453 aa13.34□□□□□ -0.27
SSBP1-212ENST00000489378 TNS4Q8IZW8 715 aa13.34□□□□□ -0.27
SSBP1-212ENST00000489378 WDR90Q96KV7 1748 aa13.34□□□□□ -0.27
SSBP1-212ENST00000489378 PCNTO95613 3336 aa13.34□□□□□ -0.27
SSBP1-212ENST00000489378 RAB3GAP2Q9H2M9 1393 aa13.33□□□□□ -0.28
SSBP1-212ENST00000489378 POTEFA5A3E0 1075 aa13.33□□□□□ -0.28
SSBP1-212ENST00000489378 LTN1O94822 1766 aa13.33□□□□□ -0.28
SSBP1-212ENST00000489378 JMYQ8N9B5 988 aa13.32□□□□□ -0.28
SSBP1-212ENST00000489378 KLRG1Q96E93 195 aa13.32□□□□□ -0.28
SSBP1-212ENST00000489378 NMRK2Q9NPI5 230 aa13.3□□□□□ -0.28
SSBP1-212ENST00000489378 CICQ96RK0 1608 aaPredicted RBP13.3□□□□□ -0.28
SSBP1-212ENST00000489378 EVC2Q86UK5 1308 aa13.3□□□□□ -0.28
SSBP1-212ENST00000489378 KTN1Q86UP2 1357 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms