RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 SSH2Q76I76 1423 aa7.11□□□□□ -1.27
PRDM1-207ENST00000489365 CPDO75976 1380 aa7.11□□□□□ -1.27
PRDM1-207ENST00000489365 BRWD3Q6RI45 1802 aa7.11□□□□□ -1.27
PRDM1-207ENST00000489365 NRAPQ86VF7 1730 aa7.11□□□□□ -1.27
PRDM1-207ENST00000489365 POTEFA5A3E0 1075 aa7.11□□□□□ -1.27
PRDM1-207ENST00000489365 CSB-PGBD3P0DP91 1061 aa7.11□□□□□ -1.27
PRDM1-207ENST00000489365 NBPF14Q5TI25 921 aa7.11□□□□□ -1.27
PRDM1-207ENST00000489365 BARGINQ6ZT62 677 aa7.11□□□□□ -1.27
PRDM1-207ENST00000489365 CARD11Q9BXL7 1154 aa7.11□□□□□ -1.27
PRDM1-207ENST00000489365 TSHZ2Q9NRE2 1034 aa7.11□□□□□ -1.27
PRDM1-207ENST00000489365 CABP1Q9NZU7 370 aa7.11□□□□□ -1.27
PRDM1-207ENST00000489365 PCDH10Q9P2E7 1040 aa7.11□□□□□ -1.27
PRDM1-207ENST00000489365 COLQQ9Y215 455 aaPredicted RBP7.11□□□□□ -1.27
PRDM1-207ENST00000489365 TOPAZ1Q8N9V7 1692 aa7.11□□□□□ -1.27
PRDM1-207ENST00000489365 USP6P35125 1406 aa7.1□□□□□ -1.27
PRDM1-207ENST00000489365 RGPD1P0DJD0 1748 aa7.1□□□□□ -1.27
PRDM1-207ENST00000489365 PARD3Q8TEW0 1356 aa7.1□□□□□ -1.27
PRDM1-207ENST00000489365 USP19O94966 1318 aa7.1□□□□□ -1.27
PRDM1-207ENST00000489365 TTC21AQ8NDW8 1320 aa7.1□□□□□ -1.27
PRDM1-207ENST00000489365 PHRF1Q9P1Y6 1649 aaKnown RBP7.1□□□□□ -1.27
PRDM1-207ENST00000489365 PLCG2P16885 1265 aa7.1□□□□□ -1.27
PRDM1-207ENST00000489365 DPY19L2Q6NUT2 758 aa7.1□□□□□ -1.27
PRDM1-207ENST00000489365 TOM1L2Q6ZVM7 507 aa7.1□□□□□ -1.27
PRDM1-207ENST00000489365 HDGFL2Q7Z4V5 671 aaPredicted RBP7.1□□□□□ -1.27
PRDM1-207ENST00000489365 CDCA7Q9BWT1 371 aaPredicted RBP7.1□□□□□ -1.27
PRDM1-207ENST00000489365 SCUBE2Q9NQ36 999 aa7.1□□□□□ -1.27
PRDM1-207ENST00000489365 TRIM37O94972 964 aa7.09□□□□□ -1.27
PRDM1-207ENST00000489365 SEC24BO95487 1268 aa7.09□□□□□ -1.27
PRDM1-207ENST00000489365 APBA3O96018 575 aa7.09□□□□□ -1.27
PRDM1-207ENST00000489365 LARP1Q6PKG0 1096 aaKnown RBP7.09□□□□□ -1.27
PRDM1-207ENST00000489365 TMC1Q8TDI8 760 aa7.09□□□□□ -1.27
PRDM1-207ENST00000489365 SIN3AQ96ST3 1273 aa7.09□□□□□ -1.27
PRDM1-207ENST00000489365 TERF2IPQ9NYB0 399 aa7.09□□□□□ -1.27
PRDM1-207ENST00000489365 CRB1P82279 1406 aa7.09□□□□□ -1.28
PRDM1-207ENST00000489365 TRPM1Q7Z4N2 1603 aa7.09□□□□□ -1.28
PRDM1-207ENST00000489365 AATKQ6ZMQ8 1374 aa7.08□□□□□ -1.28
PRDM1-207ENST00000489365 KTN1Q86UP2 1357 aaKnown RBP7.08□□□□□ -1.28
PRDM1-207ENST00000489365 NRKQ7Z2Y5 1582 aa7.08□□□□□ -1.28
PRDM1-207ENST00000489365 EN1Q05925 392 aaPredicted RBP7.08□□□□□ -1.28
PRDM1-207ENST00000489365 DDB1Q16531 1140 aa7.08□□□□□ -1.28
PRDM1-207ENST00000489365 DISP2A7MBM2 1401 aa7.08□□□□□ -1.28
PRDM1-207ENST00000489365 CRYBG1Q9Y4K1 1723 aa7.07□□□□□ -1.28
PRDM1-207ENST00000489365 THSD7AQ9UPZ6 1657 aa7.07□□□□□ -1.28
PRDM1-207ENST00000489365 COL5A2P05997 1499 aaPredicted RBP7.07□□□□□ -1.28
PRDM1-207ENST00000489365 POTEJP0CG39 1038 aa7.07□□□□□ -1.28
PRDM1-207ENST00000489365 FAM182BQ5T319 152 aa7.07□□□□□ -1.28
PRDM1-207ENST00000489365 OVOS2A0A0G2JMS6 1433 aa7.07□□□□□ -1.28
PRDM1-207ENST00000489365 OVOS2A0A0J9YW53 1432 aa7.07□□□□□ -1.28
PRDM1-207ENST00000489365 OVOS2Q6IE36 1432 aa7.07□□□□□ -1.28
PRDM1-207ENST00000489365 SBNO2Q9Y2G9 1366 aa7.07□□□□□ -1.28
PRDM1-207ENST00000489365 TTC21BQ7Z4L5 1316 aa7.06□□□□□ -1.28
PRDM1-207ENST00000489365 WDR17Q8IZU2 1322 aa7.06□□□□□ -1.28
PRDM1-207ENST00000489365 PSDA5PKW4 1024 aaPredicted RBP7.06□□□□□ -1.28
PRDM1-207ENST00000489365 R3HDM1Q15032 1099 aaKnown RBP7.06□□□□□ -1.28
PRDM1-207ENST00000489365 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.06□□□□□ -1.28
PRDM1-207ENST00000489365 PPP1R1BQ9UD71 204 aaPredicted RBP7.06□□□□□ -1.28
PRDM1-207ENST00000489365 CPSF1Q10570 1443 aaKnown RBP7.06□□□□□ -1.28
PRDM1-207ENST00000489365 NINLQ9Y2I6 1382 aa7.06□□□□□ -1.28
PRDM1-207ENST00000489365 CAMTA1Q9Y6Y1 1673 aa7.06□□□□□ -1.28
PRDM1-207ENST00000489365 EXOC5O00471 708 aa7.05□□□□□ -1.28
PRDM1-207ENST00000489365 TRIM26Q12899 539 aaPredicted RBP7.05□□□□□ -1.28
PRDM1-207ENST00000489365 EZH2Q15910 746 aaKnown RBP7.05□□□□□ -1.28
PRDM1-207ENST00000489365 CDCA8Q53HL2 280 aa7.05□□□□□ -1.28
PRDM1-207ENST00000489365 CCDC7Q96M83 1385 aa7.05□□□□□ -1.28
PRDM1-207ENST00000489365 LMO7Q8WWI1 1683 aa7.04□□□□□ -1.28
PRDM1-207ENST00000489365 ARHGEF25Q86VW2 580 aa7.04□□□□□ -1.28
PRDM1-207ENST00000489365 PUS7Q96PZ0 661 aaKnown RBP7.04□□□□□ -1.28
PRDM1-207ENST00000489365 CARD10Q9BWT7 1032 aa7.04□□□□□ -1.28
PRDM1-207ENST00000489365 NLRP2Q9NX02 1062 aa7.04□□□□□ -1.28
PRDM1-207ENST00000489365 SLIT3O75094 1523 aa7.04□□□□□ -1.28
PRDM1-207ENST00000489365 SRCAPQ6ZRS2 3230 aa7.04□□□□□ -1.28
PRDM1-207ENST00000489365 ABCC6O95255 1503 aa7.03□□□□□ -1.28
PRDM1-207ENST00000489365 LRP5O75197 1615 aa7.03□□□□□ -1.28
PRDM1-207ENST00000489365 MICALL2Q8IY33 904 aa7.03□□□□□ -1.28
PRDM1-207ENST00000489365 VSIG10Q8N0Z9 540 aa7.03□□□□□ -1.28
PRDM1-207ENST00000489365 L3MBTL3Q96JM7 780 aaPredicted RBP7.03□□□□□ -1.28
PRDM1-207ENST00000489365 CAMKK2Q96RR4 588 aa7.03□□□□□ -1.28
PRDM1-207ENST00000489365 TMEM121BQ9BXQ6 578 aaPredicted RBP7.03□□□□□ -1.28
PRDM1-207ENST00000489365 BOLA1Q9Y3E2 137 aa7.03□□□□□ -1.28
PRDM1-207ENST00000489365 PIK3C2AO00443 1686 aa7.03□□□□□ -1.28
PRDM1-207ENST00000489365 EDC4Q6P2E9 1401 aaKnown RBP7.02□□□□□ -1.29
PRDM1-207ENST00000489365 TNS1Q9HBL0 1735 aaKnown RBP7.02□□□□□ -1.29
PRDM1-207ENST00000489365 PARP4Q9UKK3 1724 aaKnown RBP7.02□□□□□ -1.29
PRDM1-207ENST00000489365 HMGB2P26583 209 aaKnown RBP7.02□□□□□ -1.29
PRDM1-207ENST00000489365 TMF1P82094 1093 aa7.02□□□□□ -1.29
PRDM1-207ENST00000489365 COG3Q96JB2 828 aa7.02□□□□□ -1.29
PRDM1-207ENST00000489365 SPON1Q9HCB6 807 aa7.02□□□□□ -1.29
PRDM1-207ENST00000489365 AKAP12Q02952 1782 aa7.02□□□□□ -1.29
PRDM1-207ENST00000489365 PLSCR1O15162 318 aa7.01□□□□□ -1.29
PRDM1-207ENST00000489365 IL2RBP14784 551 aa7.01□□□□□ -1.29
PRDM1-207ENST00000489365 AMPHP49418 695 aa7.01□□□□□ -1.29
PRDM1-207ENST00000489365 STK32BQ9NY57 414 aa7.01□□□□□ -1.29
PRDM1-207ENST00000489365 SMG6Q86US8 1419 aaKnown RBP7.01□□□□□ -1.29
PRDM1-207ENST00000489365 USP31Q70CQ4 1352 aa7□□□□□ -1.29
PRDM1-207ENST00000489365 ST20-MTHFSA0A0A6YYL1 179 aa7□□□□□ -1.29
PRDM1-207ENST00000489365 G3V3G9 751 aa7□□□□□ -1.29
PRDM1-207ENST00000489365 LCE2DQ5TA82 110 aaPredicted RBP7□□□□□ -1.29
PRDM1-207ENST00000489365 NME9Q86XW9 330 aa7□□□□□ -1.29
PRDM1-207ENST00000489365 ANKRD24Q8TF21 1146 aa7□□□□□ -1.29
PRDM1-207ENST00000489365 SLC12A5Q9H2X9 1139 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms