RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 MCM10Q7L590 875 aa23.37■■□□□ 1.33
CD40-206ENST00000489304 GAS2L2Q8NHY3 880 aa23.37■■□□□ 1.33
CD40-206ENST00000489304 BCAR3O75815 825 aa23.36■■□□□ 1.33
CD40-206ENST00000489304 EXOSC9Q06265 439 aaKnown RBP23.36■■□□□ 1.33
CD40-206ENST00000489304 LAS1LQ9Y4W2 734 aaKnown RBP23.36■■□□□ 1.33
CD40-206ENST00000489304 CFAP44Q96MT7 982 aa23.35■■□□□ 1.33
CD40-206ENST00000489304 COL5A2P05997 1499 aaPredicted RBP23.34■■□□□ 1.33
CD40-206ENST00000489304 FAM208AQ9UK61 1670 aaKnown RBP23.34■■□□□ 1.33
CD40-206ENST00000489304 HTATSF1O43719 755 aaKnown RBP23.33■■□□□ 1.32
CD40-206ENST00000489304 EXOC6Q8TAG9 804 aa23.33■■□□□ 1.32
CD40-206ENST00000489304 STRN4Q9NRL3 753 aa23.33■■□□□ 1.32
CD40-206ENST00000489304 WDR17Q8IZU2 1322 aa23.31■■□□□ 1.32
CD40-206ENST00000489304 LRRC37A3O60309 1634 aa23.31■■□□□ 1.32
CD40-206ENST00000489304 NUTM2BA6NNL0 878 aaPredicted RBP23.31■■□□□ 1.32
CD40-206ENST00000489304 NUTM2EB1AL46 878 aaPredicted RBP23.31■■□□□ 1.32
CD40-206ENST00000489304 NUTM2AQ8IVF1 878 aaPredicted RBP23.31■■□□□ 1.32
CD40-206ENST00000489304 C20orf194Q5TEA3 1177 aa23.3■■□□□ 1.32
CD40-206ENST00000489304 MBIPQ9NS73 344 aa23.3■■□□□ 1.32
CD40-206ENST00000489304 CRB1P82279 1406 aa23.3■■□□□ 1.32
CD40-206ENST00000489304 GNAT3A8MTJ3 354 aa23.3■■□□□ 1.32
CD40-206ENST00000489304 ADAMTS2O95450 1211 aa23.3■■□□□ 1.32
CD40-206ENST00000489304 PLEKHO1Q53GL0 409 aaPredicted RBP23.3■■□□□ 1.32
CD40-206ENST00000489304 LARP1Q6PKG0 1096 aaKnown RBP23.3■■□□□ 1.32
CD40-206ENST00000489304 TOM1L2Q6ZVM7 507 aa23.3■■□□□ 1.32
CD40-206ENST00000489304 BTG4Q9NY30 223 aa23.3■■□□□ 1.32
CD40-206ENST00000489304 MEGF6O75095 1541 aa23.29■■□□□ 1.32
CD40-206ENST00000489304 RTF1Q92541 710 aaKnown RBP23.29■■□□□ 1.32
CD40-206ENST00000489304 CRBNQ96SW2 442 aa23.29■■□□□ 1.32
CD40-206ENST00000489304 MAP3K5Q99683 1374 aa23.29■■□□□ 1.32
CD40-206ENST00000489304 EVA1CP58658 441 aa23.28■■□□□ 1.32
CD40-206ENST00000489304 ZNF530Q6P9A1 599 aaPredicted RBP23.28■■□□□ 1.32
CD40-206ENST00000489304 IL17REQ8NFR9 667 aa23.28■■□□□ 1.32
CD40-206ENST00000489304 RAPGEF4Q8WZA2 1011 aa23.28■■□□□ 1.32
CD40-206ENST00000489304 ZNF428Q96B54 188 aa23.28■■□□□ 1.32
CD40-206ENST00000489304 CHL1O00533 1208 aa23.27■■□□□ 1.32
CD40-206ENST00000489304 TATP17735 454 aaPredicted RBP23.27■■□□□ 1.32
CD40-206ENST00000489304 PDE3AQ14432 1141 aa23.27■■□□□ 1.32
CD40-206ENST00000489304 B4GALNT3Q6L9W6 998 aa23.27■■□□□ 1.32
CD40-206ENST00000489304 AMOTQ4VCS5 1084 aa23.26■■□□□ 1.31
CD40-206ENST00000489304 COL14A1Q05707 1796 aaKnown RBP23.25■■□□□ 1.31
CD40-206ENST00000489304 PELP1Q8IZL8 1130 aaKnown RBP23.25■■□□□ 1.31
CD40-206ENST00000489304 LGR6Q9HBX8 967 aa23.25■■□□□ 1.31
CD40-206ENST00000489304 ALDH1L2Q3SY69 923 aa23.24■■□□□ 1.31
CD40-206ENST00000489304 CCDC136Q96JN2 1154 aa23.24■■□□□ 1.31
CD40-206ENST00000489304 CARD10Q9BWT7 1032 aa23.24■■□□□ 1.31
CD40-206ENST00000489304 MIS18AQ9NYP9 233 aa23.24■■□□□ 1.31
CD40-206ENST00000489304 AKAP4Q5JQC9 854 aa23.23■■□□□ 1.31
CD40-206ENST00000489304 SSH1Q8WYL5 1049 aa23.23■■□□□ 1.31
CD40-206ENST00000489304 VAMP4O75379 141 aa23.22■■□□□ 1.31
CD40-206ENST00000489304 BCL2L13Q9BXK5 485 aa23.22■■□□□ 1.31
CD40-206ENST00000489304 VIRMAQ69YN4 1812 aaKnown RBP23.22■■□□□ 1.31
CD40-206ENST00000489304 JCADQ9P266 1359 aa23.22■■□□□ 1.31
CD40-206ENST00000489304 CANXP27824 592 aaKnown RBP23.22■■□□□ 1.31
CD40-206ENST00000489304 HSPA1LP34931 641 aa23.22■■□□□ 1.31
CD40-206ENST00000489304 MPRIPQ6WCQ1 1025 aa23.22■■□□□ 1.31
CD40-206ENST00000489304 SMC4Q9NTJ3 1288 aa23.22■■□□□ 1.31
CD40-206ENST00000489304 FRAT1Q92837 279 aaPredicted RBP23.21■■□□□ 1.31
CD40-206ENST00000489304 PLEKHG2Q9H7P9 1386 aa23.21■■□□□ 1.31
CD40-206ENST00000489304 TSPYL6Q8N831 410 aa23.2■■□□□ 1.3
CD40-206ENST00000489304 USP35Q9P2H5 1018 aa23.2■■□□□ 1.3
CD40-206ENST00000489304 BRPF1P55201 1214 aaPredicted RBP23.19■■□□□ 1.3
CD40-206ENST00000489304 C1orf141Q5JVX7 400 aa23.19■■□□□ 1.3
CD40-206ENST00000489304 TWISTNBQ3B726 338 aaPredicted RBP23.19■■□□□ 1.3
CD40-206ENST00000489304 C8orf58Q8NAV2 365 aa23.19■■□□□ 1.3
CD40-206ENST00000489304 CEMIPQ8WUJ3 1361 aa23.18■■□□□ 1.3
CD40-206ENST00000489304 ELL2O00472 640 aaPredicted RBP23.18■■□□□ 1.3
CD40-206ENST00000489304 RNMTO43148 476 aaKnown RBP23.18■■□□□ 1.3
CD40-206ENST00000489304 KRT24Q2M2I5 525 aa23.18■■□□□ 1.3
CD40-206ENST00000489304 SPG7Q9UQ90 795 aa23.18■■□□□ 1.3
CD40-206ENST00000489304 OVOS2A0A0G2JMS6 1433 aa23.17■■□□□ 1.3
CD40-206ENST00000489304 ZKSCAN2Q63HK3 967 aa23.17■■□□□ 1.3
CD40-206ENST00000489304 BABAM1Q9NWV8 329 aa23.17■■□□□ 1.3
CD40-206ENST00000489304 PLCH1Q4KWH8 1693 aa23.17■■□□□ 1.3
CD40-206ENST00000489304 KIF16BQ96L93 1317 aa23.17■■□□□ 1.3
CD40-206ENST00000489304 PHKG2P15735 406 aa23.16■■□□□ 1.3
CD40-206ENST00000489304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.16■■□□□ 1.3
CD40-206ENST00000489304 TSPYL4Q9UJ04 414 aa23.16■■□□□ 1.3
CD40-206ENST00000489304 CYP27B1O15528 508 aa23.16■■□□□ 1.3
CD40-206ENST00000489304 IL2RBP14784 551 aa23.16■■□□□ 1.3
CD40-206ENST00000489304 ADAMTS7Q9UKP4 1686 aa23.15■■□□□ 1.3
CD40-206ENST00000489304 MS4A1P11836 297 aa23.15■■□□□ 1.3
CD40-206ENST00000489304 PANK1Q8TE04 598 aa23.15■■□□□ 1.3
CD40-206ENST00000489304 TAF7Q15545 349 aaPredicted RBP23.14■■□□□ 1.3
CD40-206ENST00000489304 PKD1L3Q7Z443 1732 aa23.14■■□□□ 1.3
CD40-206ENST00000489304 LRP6O75581 1613 aa23.13■■□□□ 1.29
CD40-206ENST00000489304 IFNL2Q8IZJ0 200 aa23.13■■□□□ 1.29
CD40-206ENST00000489304 ZCRB1Q8TBF4 217 aaKnown RBP23.13■■□□□ 1.29
CD40-206ENST00000489304 IPO8O15397 1037 aaKnown RBP23.12■■□□□ 1.29
CD40-206ENST00000489304 RLBP1P12271 317 aa23.12■■□□□ 1.29
CD40-206ENST00000489304 NRAPQ86VF7 1730 aa23.12■■□□□ 1.29
CD40-206ENST00000489304 MRPL50Q8N5N7 158 aaKnown RBP23.12■■□□□ 1.29
CD40-206ENST00000489304 NOB1Q9ULX3 412 aaKnown RBP23.12■■□□□ 1.29
CD40-206ENST00000489304 TNNQ9UQP3 1299 aa23.12■■□□□ 1.29
CD40-206ENST00000489304 SLIT2O94813 1529 aa23.12■■□□□ 1.29
CD40-206ENST00000489304 KDM3BQ7LBC6 1761 aa23.12■■□□□ 1.29
CD40-206ENST00000489304 PARP4Q9UKK3 1724 aaKnown RBP23.11■■□□□ 1.29
CD40-206ENST00000489304 KDM6AO15550 1401 aaPredicted RBP23.11■■□□□ 1.29
CD40-206ENST00000489304 ATF7IPQ6VMQ6 1270 aa23.11■■□□□ 1.29
CD40-206ENST00000489304 SIPA1L3O60292 1781 aaPredicted RBP23.11■■□□□ 1.29
CD40-206ENST00000489304 TCERG1O14776 1098 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms