RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 TOM1O60784 492 aa12.47□□□□□ -0.41
TRAPPC12-221ENST00000489032 NKX2-3Q8TAU0 364 aa12.47□□□□□ -0.41
TRAPPC12-221ENST00000489032 GJD4Q96KN9 370 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC12-221ENST00000489032 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
TRAPPC12-221ENST00000489032 GGCXP38435 758 aa12.46□□□□□ -0.41
TRAPPC12-221ENST00000489032 TROQ12816 1431 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC12-221ENST00000489032 CNTLNQ9NXG0 1405 aa12.45□□□□□ -0.42
TRAPPC12-221ENST00000489032 DIP2CQ9Y2E4 1556 aa12.45□□□□□ -0.42
TRAPPC12-221ENST00000489032 TRAK2O60296 914 aa12.45□□□□□ -0.42
TRAPPC12-221ENST00000489032 ITGBL1O95965 494 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC12-221ENST00000489032 S1PR4O95977 384 aa12.45□□□□□ -0.42
TRAPPC12-221ENST00000489032 TRIM34Q9BYJ4 488 aa12.45□□□□□ -0.42
TRAPPC12-221ENST00000489032 AGLP35573 1532 aa12.45□□□□□ -0.42
TRAPPC12-221ENST00000489032 NPATQ14207 1427 aa12.45□□□□□ -0.42
TRAPPC12-221ENST00000489032 KDM5CP41229 1560 aa12.44□□□□□ -0.42
TRAPPC12-221ENST00000489032 AFAP1Q8N556 730 aa12.44□□□□□ -0.42
TRAPPC12-221ENST00000489032 EVA1BQ9NVM1 165 aa12.44□□□□□ -0.42
TRAPPC12-221ENST00000489032 ZNF330Q9Y3S2 320 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC12-221ENST00000489032 LRRIQ1Q96JM4 1722 aa12.44□□□□□ -0.42
TRAPPC12-221ENST00000489032 MYO5CQ9NQX4 1742 aa12.44□□□□□ -0.42
TRAPPC12-221ENST00000489032 MTUS2Q5JR59 1369 aa12.43□□□□□ -0.42
TRAPPC12-221ENST00000489032 PLA2R1Q13018 1463 aa12.43□□□□□ -0.42
TRAPPC12-221ENST00000489032 KCNH2Q12809 1159 aa12.43□□□□□ -0.42
TRAPPC12-221ENST00000489032 ARMC2Q8NEN0 867 aa12.43□□□□□ -0.42
TRAPPC12-221ENST00000489032 EPS8L1Q8TE68 723 aa12.43□□□□□ -0.42
TRAPPC12-221ENST00000489032 SUPT6HQ7KZ85 1726 aaKnown RBP12.42□□□□□ -0.42
TRAPPC12-221ENST00000489032 KIF14Q15058 1648 aa12.42□□□□□ -0.42
TRAPPC12-221ENST00000489032 MAP10Q9P2G4 905 aa12.42□□□□□ -0.42
TRAPPC12-221ENST00000489032 F12P00748 615 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC12-221ENST00000489032 WASHC4Q2M389 1173 aa12.41□□□□□ -0.42
TRAPPC12-221ENST00000489032 ABCA6Q8N139 1617 aa12.4□□□□□ -0.42
TRAPPC12-221ENST00000489032 FKBPLQ9UIM3 349 aa12.4□□□□□ -0.42
TRAPPC12-221ENST00000489032 TCOF1Q13428 1488 aaKnown RBP12.4□□□□□ -0.43
TRAPPC12-221ENST00000489032 MROH2AA6NES4 1674 aa12.39□□□□□ -0.43
TRAPPC12-221ENST00000489032 FCF1Q9Y324 198 aaKnown RBP12.39□□□□□ -0.43
TRAPPC12-221ENST00000489032 MLH3Q9UHC1 1453 aa12.39□□□□□ -0.43
TRAPPC12-221ENST00000489032 TIAM1Q13009 1591 aa12.39□□□□□ -0.43
TRAPPC12-221ENST00000489032 ZNF142P52746 1687 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC12-221ENST00000489032 CPS1P31327 1500 aa12.38□□□□□ -0.43
TRAPPC12-221ENST00000489032 MAP3K1Q13233 1512 aa12.38□□□□□ -0.43
TRAPPC12-221ENST00000489032 EHBP1L1Q8N3D4 1523 aa12.38□□□□□ -0.43
TRAPPC12-221ENST00000489032 ARHGAP5Q13017 1502 aa12.37□□□□□ -0.43
TRAPPC12-221ENST00000489032 ZBTB24O43167 697 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC12-221ENST00000489032 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC12-221ENST00000489032 ZNF777Q9ULD5 760 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC12-221ENST00000489032 ZMYM3Q14202 1370 aa12.37□□□□□ -0.43
TRAPPC12-221ENST00000489032 MYO3AQ8NEV4 1616 aa12.37□□□□□ -0.43
TRAPPC12-221ENST00000489032 PTPRKQ15262 1439 aa12.37□□□□□ -0.43
TRAPPC12-221ENST00000489032 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
TRAPPC12-221ENST00000489032 CEP170BQ9Y4F5 1589 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC12-221ENST00000489032 NBPF14Q5TI25 921 aa12.36□□□□□ -0.43
TRAPPC12-221ENST00000489032 UNC93B1Q9H1C4 597 aa12.35□□□□□ -0.43
TRAPPC12-221ENST00000489032 PPEF1O14829 653 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC12-221ENST00000489032 GPKOWQ92917 476 aaPredicted RBP eCLIP12.34□□□□□ -0.43
TRAPPC12-221ENST00000489032 LRRC9Q6ZRR7 1453 aa12.34□□□□□ -0.43
TRAPPC12-221ENST00000489032 CCNB3Q8WWL7 1395 aa12.33□□□□□ -0.44
TRAPPC12-221ENST00000489032 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-221ENST00000489032 SHANK2Q9UPX8 1470 aa12.33□□□□□ -0.44
TRAPPC12-221ENST00000489032 IRF5Q13568 498 aa12.32□□□□□ -0.44
TRAPPC12-221ENST00000489032 PPP1R18Q6NYC8 613 aa12.32□□□□□ -0.44
TRAPPC12-221ENST00000489032 ANKLE1Q8NAG6 615 aa12.32□□□□□ -0.44
TRAPPC12-221ENST00000489032 RGS17Q9UGC6 210 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC12-221ENST00000489032 RNF223E7ERA6 249 aa12.31□□□□□ -0.44
TRAPPC12-221ENST00000489032 PTK2Q05397 1052 aa12.31□□□□□ -0.44
TRAPPC12-221ENST00000489032 VAC14Q08AM6 782 aa12.31□□□□□ -0.44
TRAPPC12-221ENST00000489032 KIDINS220Q9ULH0 1771 aa12.3□□□□□ -0.44
TRAPPC12-221ENST00000489032 KANK4Q5T7N3 995 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-221ENST00000489032 PTCRAQ6ISU1 281 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-221ENST00000489032 PDXDC2PQ6P474 469 aa12.3□□□□□ -0.44
TRAPPC12-221ENST00000489032 CFDP1Q9UEE9 299 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-221ENST00000489032 CLTCQ00610 1675 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-221ENST00000489032 NCOA2Q15596 1464 aa12.29□□□□□ -0.44
TRAPPC12-221ENST00000489032 POLR1AO95602 1720 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC12-221ENST00000489032 ZBBXA8MT70 800 aa12.29□□□□□ -0.44
TRAPPC12-221ENST00000489032 EIF4G2P78344 907 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRAPPC12-221ENST00000489032 AGERQ15109 404 aa12.29□□□□□ -0.44
TRAPPC12-221ENST00000489032 CALR3Q96L12 384 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-221ENST00000489032 PREX2Q70Z35 1606 aa12.29□□□□□ -0.44
TRAPPC12-221ENST00000489032 GPATCH8Q9UKJ3 1502 aaKnown RBP12.28□□□□□ -0.44
TRAPPC12-221ENST00000489032 NR1H3Q13133 447 aa12.28□□□□□ -0.44
TRAPPC12-221ENST00000489032 ALKQ9UM73 1620 aa12.28□□□□□ -0.44
TRAPPC12-221ENST00000489032 ITSN2Q9NZM3 1697 aa12.28□□□□□ -0.44
TRAPPC12-221ENST00000489032 CDC42BPBQ9Y5S2 1711 aa12.28□□□□□ -0.44
TRAPPC12-221ENST00000489032 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.44
TRAPPC12-221ENST00000489032 ABCC1P33527 1531 aa12.27□□□□□ -0.44
TRAPPC12-221ENST00000489032 DNMT1P26358 1616 aaKnown RBP12.27□□□□□ -0.44
TRAPPC12-221ENST00000489032 SEMA3FQ13275 785 aa12.27□□□□□ -0.45
TRAPPC12-221ENST00000489032 CCDC97Q96F63 343 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC12-221ENST00000489032 GPSM3Q9Y4H4 160 aa12.27□□□□□ -0.45
TRAPPC12-221ENST00000489032 CDC42BPAQ5VT25 1732 aa12.27□□□□□ -0.45
TRAPPC12-221ENST00000489032 SOX11P35716 441 aa12.26□□□□□ -0.45
TRAPPC12-221ENST00000489032 ZBTB33Q86T24 672 aa12.26□□□□□ -0.45
TRAPPC12-221ENST00000489032 BAP1Q92560 729 aa12.26□□□□□ -0.45
TRAPPC12-221ENST00000489032 ZNF592Q92610 1267 aa12.26□□□□□ -0.45
TRAPPC12-221ENST00000489032 ARHGAP9Q9BRR9 750 aa12.26□□□□□ -0.45
TRAPPC12-221ENST00000489032 PLA2G2EQ9NZK7 142 aa12.26□□□□□ -0.45
TRAPPC12-221ENST00000489032 POM121CA8CG34 1229 aa12.25□□□□□ -0.45
TRAPPC12-221ENST00000489032 GPR37L1O60883 481 aa12.25□□□□□ -0.45
TRAPPC12-221ENST00000489032 LINC01559Q495D7 138 aa12.25□□□□□ -0.45
TRAPPC12-221ENST00000489032 IFFO2Q5TF58 517 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms