RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 OVOS2A0A0G2JMS6 1433 aa21.09■□□□□ 0.97
CLDN11-208ENST00000488989 VIRMAQ69YN4 1812 aaKnown RBP21.08■□□□□ 0.97
CLDN11-208ENST00000488989 SPATA31A1Q5TZJ5 1347 aa21.08■□□□□ 0.97
CLDN11-208ENST00000488989 SPATA31A5Q5VU36 1347 aa21.08■□□□□ 0.97
CLDN11-208ENST00000488989 SPATA31A7Q8IWB4 1347 aa21.08■□□□□ 0.97
CLDN11-208ENST00000488989 TATP17735 454 aaPredicted RBP21.08■□□□□ 0.97
CLDN11-208ENST00000488989 RIPK4P57078 832 aa21.08■□□□□ 0.97
CLDN11-208ENST00000488989 VPS72Q15906 364 aa21.08■□□□□ 0.97
CLDN11-208ENST00000488989 PLEKHO1Q53GL0 409 aaPredicted RBP21.08■□□□□ 0.97
CLDN11-208ENST00000488989 SHANK3Q9BYB0 1731 aa21.08■□□□□ 0.97
CLDN11-208ENST00000488989 TRIM35Q9UPQ4 493 aa21.08■□□□□ 0.97
CLDN11-208ENST00000488989 THRAP3Q9Y2W1 955 aaKnown RBP21.08■□□□□ 0.97
CLDN11-208ENST00000488989 SENP3-EIF4A1A0A087X0R7 540 aa21.07■□□□□ 0.96
CLDN11-208ENST00000488989 IL2RBP14784 551 aa21.06■□□□□ 0.96
CLDN11-208ENST00000488989 WWC1Q8IX03 1113 aa21.06■□□□□ 0.96
CLDN11-208ENST00000488989 USP21Q9UK80 565 aa21.06■□□□□ 0.96
CLDN11-208ENST00000488989 SALL2Q9Y467 1007 aaPredicted RBP21.06■□□□□ 0.96
CLDN11-208ENST00000488989 AFF2P51816 1311 aa21.05■□□□□ 0.96
CLDN11-208ENST00000488989 NEUROD2Q15784 382 aa21.05■□□□□ 0.96
CLDN11-208ENST00000488989 ADAMTS7Q9UKP4 1686 aa21.05■□□□□ 0.96
CLDN11-208ENST00000488989 HTATSF1O43719 755 aaKnown RBP21.04■□□□□ 0.96
CLDN11-208ENST00000488989 LMOD3Q0VAK6 560 aa21.04■□□□□ 0.96
CLDN11-208ENST00000488989 PDE3BQ13370 1112 aa21.04■□□□□ 0.96
CLDN11-208ENST00000488989 ATRNO75882 1429 aa21.04■□□□□ 0.96
CLDN11-208ENST00000488989 BARGINQ6ZT62 677 aa21.03■□□□□ 0.96
CLDN11-208ENST00000488989 WDR63Q8IWG1 891 aa21.03■□□□□ 0.96
CLDN11-208ENST00000488989 MAP3K5Q99683 1374 aa21.02■□□□□ 0.96
CLDN11-208ENST00000488989 CDCA7Q9BWT1 371 aaPredicted RBP21.02■□□□□ 0.96
CLDN11-208ENST00000488989 SPG7Q9UQ90 795 aa21.02■□□□□ 0.96
CLDN11-208ENST00000488989 LRRC37A3O60309 1634 aa21.02■□□□□ 0.96
CLDN11-208ENST00000488989 AKAP4Q5JQC9 854 aa21.01■□□□□ 0.95
CLDN11-208ENST00000488989 USP35Q9P2H5 1018 aa21.01■□□□□ 0.95
CLDN11-208ENST00000488989 GLI3P10071 1580 aa21.01■□□□□ 0.95
CLDN11-208ENST00000488989 SCN11AQ9UI33 1791 aa21■□□□□ 0.95
CLDN11-208ENST00000488989 GNAT3A8MTJ3 354 aa21■□□□□ 0.95
CLDN11-208ENST00000488989 ZNF530Q6P9A1 599 aaPredicted RBP21■□□□□ 0.95
CLDN11-208ENST00000488989 IL16Q14005 1332 aa21■□□□□ 0.95
CLDN11-208ENST00000488989 GOLGA2Q08379 1002 aa20.99■□□□□ 0.95
CLDN11-208ENST00000488989 TRPC5Q9UL62 973 aaPredicted RBP20.99■□□□□ 0.95
CLDN11-208ENST00000488989 ZCRB1Q8TBF4 217 aaKnown RBP20.98■□□□□ 0.95
CLDN11-208ENST00000488989 THSD7AQ9UPZ6 1657 aa20.98■□□□□ 0.95
CLDN11-208ENST00000488989 TNS2Q63HR2 1409 aa20.97■□□□□ 0.95
CLDN11-208ENST00000488989 TRMT2AQ8IZ69 625 aaKnown RBP20.97■□□□□ 0.95
CLDN11-208ENST00000488989 CEMIPQ8WUJ3 1361 aa20.97■□□□□ 0.95
CLDN11-208ENST00000488989 CYP27B1O15528 508 aa20.96■□□□□ 0.95
CLDN11-208ENST00000488989 PHKG2P15735 406 aa20.96■□□□□ 0.95
CLDN11-208ENST00000488989 CALD1Q05682 793 aaKnown RBP20.96■□□□□ 0.95
CLDN11-208ENST00000488989 SLFN5Q08AF3 891 aa20.96■□□□□ 0.95
CLDN11-208ENST00000488989 C1orf141Q5JVX7 400 aa20.96■□□□□ 0.95
CLDN11-208ENST00000488989 IFNL2Q8IZJ0 200 aa20.96■□□□□ 0.95
CLDN11-208ENST00000488989 RTF1Q92541 710 aaKnown RBP20.96■□□□□ 0.95
CLDN11-208ENST00000488989 GJD4Q96KN9 370 aaPredicted RBP20.96■□□□□ 0.95
CLDN11-208ENST00000488989 CCDC9Q9Y3X0 531 aaKnown RBP20.96■□□□□ 0.95
CLDN11-208ENST00000488989 PCDH11XQ9BZA7 1347 aa20.96■□□□□ 0.95
CLDN11-208ENST00000488989 PCDH11YQ9BZA8 1340 aa20.96■□□□□ 0.95
CLDN11-208ENST00000488989 SIPA1L3O60292 1781 aaPredicted RBP20.95■□□□□ 0.94
CLDN11-208ENST00000488989 E9PSI1 815 aa20.95■□□□□ 0.94
CLDN11-208ENST00000488989 IL17REQ8NFR9 667 aa20.95■□□□□ 0.94
CLDN11-208ENST00000488989 CDCA7LQ96GN5 454 aa20.95■□□□□ 0.94
CLDN11-208ENST00000488989 DCTN1Q14203 1278 aa20.94■□□□□ 0.94
CLDN11-208ENST00000488989 SPINK5Q9NQ38 1064 aaPredicted RBP20.94■□□□□ 0.94
CLDN11-208ENST00000488989 CENPBP07199 599 aaPredicted RBP20.93■□□□□ 0.94
CLDN11-208ENST00000488989 HSP90AB1P08238 724 aaKnown RBP20.93■□□□□ 0.94
CLDN11-208ENST00000488989 NKX1-1Q15270 411 aaPredicted RBP20.93■□□□□ 0.94
CLDN11-208ENST00000488989 ZNF772Q68DY9 489 aaPredicted RBP20.93■□□□□ 0.94
CLDN11-208ENST00000488989 MCM10Q7L590 875 aa20.93■□□□□ 0.94
CLDN11-208ENST00000488989 THUMPD2Q9BTF0 503 aaKnown RBP20.93■□□□□ 0.94
CLDN11-208ENST00000488989 EXOC5O00471 708 aa20.92■□□□□ 0.94
CLDN11-208ENST00000488989 RNMTO43148 476 aaKnown RBP20.92■□□□□ 0.94
CLDN11-208ENST00000488989 ONECUT3O60422 494 aaPredicted RBP20.92■□□□□ 0.94
CLDN11-208ENST00000488989 ZNF853P0CG23 659 aa20.92■□□□□ 0.94
CLDN11-208ENST00000488989 QTRT2Q9H974 415 aaKnown RBP20.92■□□□□ 0.94
CLDN11-208ENST00000488989 KDM6AO15550 1401 aaPredicted RBP20.92■□□□□ 0.94
CLDN11-208ENST00000488989 MRC1P22897 1456 aa20.91■□□□□ 0.94
CLDN11-208ENST00000488989 DUSP27Q5VZP5 1158 aa20.91■□□□□ 0.94
CLDN11-208ENST00000488989 IFT57Q9NWB7 429 aa20.91■□□□□ 0.94
CLDN11-208ENST00000488989 FAM98CQ17RN3 349 aaKnown RBP20.9■□□□□ 0.94
CLDN11-208ENST00000488989 DCAF5Q96JK2 942 aa20.9■□□□□ 0.94
CLDN11-208ENST00000488989 LGR6Q9HBX8 967 aa20.9■□□□□ 0.94
CLDN11-208ENST00000488989 GNAI1P63096 354 aa20.89■□□□□ 0.93
CLDN11-208ENST00000488989 DDB1Q16531 1140 aa20.89■□□□□ 0.93
CLDN11-208ENST00000488989 MPRIPQ6WCQ1 1025 aa20.89■□□□□ 0.93
CLDN11-208ENST00000488989 CFAP44Q96MT7 982 aa20.89■□□□□ 0.93
CLDN11-208ENST00000488989 TOGARAM1Q9Y4F4 1720 aa20.89■□□□□ 0.93
CLDN11-208ENST00000488989 MYH16Q9H6N6 1097 aa20.88■□□□□ 0.93
CLDN11-208ENST00000488989 BABAM1Q9NWV8 329 aa20.88■□□□□ 0.93
CLDN11-208ENST00000488989 KDM3BQ7LBC6 1761 aa20.87■□□□□ 0.93
CLDN11-208ENST00000488989 ITGB4P16144 1822 aa20.87■□□□□ 0.93
CLDN11-208ENST00000488989 CHL1O00533 1208 aa20.86■□□□□ 0.93
CLDN11-208ENST00000488989 DDX54Q8TDD1 881 aaKnown RBP20.86■□□□□ 0.93
CLDN11-208ENST00000488989 FANCIQ9NVI1 1328 aa20.85■□□□□ 0.93
CLDN11-208ENST00000488989 TAF7Q15545 349 aaPredicted RBP20.85■□□□□ 0.93
CLDN11-208ENST00000488989 ILDR1Q86SU0 546 aaPredicted RBP20.84■□□□□ 0.93
CLDN11-208ENST00000488989 RGS17Q9UGC6 210 aaPredicted RBP20.84■□□□□ 0.93
CLDN11-208ENST00000488989 ERVV-2B6SEH9 535 aa20.83■□□□□ 0.93
CLDN11-208ENST00000488989 RBM6P78332 1123 aaKnown RBP20.83■□□□□ 0.93
CLDN11-208ENST00000488989 TEFQ10587 303 aa20.83■□□□□ 0.93
CLDN11-208ENST00000488989 SLC52A2Q9HAB3 445 aa20.83■□□□□ 0.93
CLDN11-208ENST00000488989 MBIPQ9NS73 344 aa20.83■□□□□ 0.93
CLDN11-208ENST00000488989 BRWD3Q6RI45 1802 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms