RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 DDX10Q13206 875 aaKnown RBP8.95□□□□□ -0.98
PTPRD-212ENST00000488774 MORC1Q86VD1 984 aa8.95□□□□□ -0.98
PTPRD-212ENST00000488774 KNSTRNQ9Y448 316 aa8.95□□□□□ -0.98
PTPRD-212ENST00000488774 TAF1LQ8IZX4 1826 aa8.95□□□□□ -0.98
PTPRD-212ENST00000488774 OVOS2A0A0G2JMS6 1433 aa8.95□□□□□ -0.98
PTPRD-212ENST00000488774 TRIM37O94972 964 aa8.94□□□□□ -0.98
PTPRD-212ENST00000488774 THRAP3Q9Y2W1 955 aaKnown RBP8.94□□□□□ -0.98
PTPRD-212ENST00000488774 NPC1L1Q9UHC9 1359 aa8.94□□□□□ -0.98
PTPRD-212ENST00000488774 RGPD3A6NKT7 1758 aaPredicted RBP8.94□□□□□ -0.98
PTPRD-212ENST00000488774 RGPD4Q7Z3J3 1758 aa8.94□□□□□ -0.98
PTPRD-212ENST00000488774 IL13P35225 146 aa8.93□□□□□ -0.98
PTPRD-212ENST00000488774 MTHFSP49914 203 aa8.93□□□□□ -0.98
PTPRD-212ENST00000488774 SIPA1L3O60292 1781 aaPredicted RBP8.93□□□□□ -0.98
PTPRD-212ENST00000488774 KIF24Q5T7B8 1368 aa8.92□□□□□ -0.98
PTPRD-212ENST00000488774 IGSF1Q8N6C5 1336 aa8.92□□□□□ -0.98
PTPRD-212ENST00000488774 IL2RBP14784 551 aa8.92□□□□□ -0.98
PTPRD-212ENST00000488774 DDB1Q16531 1140 aa8.92□□□□□ -0.98
PTPRD-212ENST00000488774 ACSBG1Q96GR2 724 aa8.92□□□□□ -0.98
PTPRD-212ENST00000488774 ADAMTS7Q9UKP4 1686 aa8.91□□□□□ -0.98
PTPRD-212ENST00000488774 PAPPAQ13219 1627 aa8.91□□□□□ -0.98
PTPRD-212ENST00000488774 PARD3Q8TEW0 1356 aa8.91□□□□□ -0.98
PTPRD-212ENST00000488774 CYP27B1O15528 508 aa8.91□□□□□ -0.98
PTPRD-212ENST00000488774 PPP2R1AP30153 589 aa8.91□□□□□ -0.98
PTPRD-212ENST00000488774 EN1Q05925 392 aaPredicted RBP8.91□□□□□ -0.98
PTPRD-212ENST00000488774 PROM2Q8N271 834 aa8.91□□□□□ -0.98
PTPRD-212ENST00000488774 EZH2Q15910 746 aaKnown RBP8.9□□□□□ -0.98
PTPRD-212ENST00000488774 BCL9O00512 1426 aa8.89□□□□□ -0.99
PTPRD-212ENST00000488774 CASZ1Q86V15 1759 aa8.89□□□□□ -0.99
PTPRD-212ENST00000488774 PDE3BQ13370 1112 aa8.89□□□□□ -0.99
PTPRD-212ENST00000488774 CCDC184Q52MB2 194 aa8.89□□□□□ -0.99
PTPRD-212ENST00000488774 DDX54Q8TDD1 881 aaKnown RBP8.89□□□□□ -0.99
PTPRD-212ENST00000488774 CAMKK2Q96RR4 588 aa8.89□□□□□ -0.99
PTPRD-212ENST00000488774 MYH14Q7Z406 1995 aaKnown RBP8.89□□□□□ -0.99
PTPRD-212ENST00000488774 KDM6AO15550 1401 aaPredicted RBP8.88□□□□□ -0.99
PTPRD-212ENST00000488774 KDRP35968 1356 aa8.88□□□□□ -0.99
PTPRD-212ENST00000488774 EXOC5O00471 708 aa8.88□□□□□ -0.99
PTPRD-212ENST00000488774 HMOX1P09601 288 aa8.88□□□□□ -0.99
PTPRD-212ENST00000488774 KCNQ4P56696 695 aa8.88□□□□□ -0.99
PTPRD-212ENST00000488774 FAM196AQ6ZSG2 479 aa8.88□□□□□ -0.99
PTPRD-212ENST00000488774 C5P01031 1676 aa8.88□□□□□ -0.99
PTPRD-212ENST00000488774 SULT6B1Q6IMI4 303 aa8.87□□□□□ -0.99
PTPRD-212ENST00000488774 ZCRB1Q8TBF4 217 aaKnown RBP8.87□□□□□ -0.99
PTPRD-212ENST00000488774 COL5A3P25940 1745 aaPredicted RBP8.87□□□□□ -0.99
PTPRD-212ENST00000488774 UBR2Q8IWV8 1755 aa8.86□□□□□ -0.99
PTPRD-212ENST00000488774 TJP1Q07157 1748 aa8.86□□□□□ -0.99
PTPRD-212ENST00000488774 UBR3Q6ZT12 1888 aa8.86□□□□□ -0.99
PTPRD-212ENST00000488774 APBA3O96018 575 aa8.86□□□□□ -0.99
PTPRD-212ENST00000488774 ZEB1P37275 1124 aaPredicted RBP8.86□□□□□ -0.99
PTPRD-212ENST00000488774 PDGFDQ9GZP0 370 aaPredicted RBP8.86□□□□□ -0.99
PTPRD-212ENST00000488774 ANO8Q9HCE9 1232 aaPredicted RBP8.86□□□□□ -0.99
PTPRD-212ENST00000488774 ZNF316A6NFI3 1004 aaPredicted RBP8.85□□□□□ -0.99
PTPRD-212ENST00000488774 PRIM1P49642 420 aaKnown RBP8.85□□□□□ -0.99
PTPRD-212ENST00000488774 PHACTR3Q96KR7 559 aa8.85□□□□□ -0.99
PTPRD-212ENST00000488774 CDCA7Q9BWT1 371 aaPredicted RBP8.85□□□□□ -0.99
PTPRD-212ENST00000488774 LRRC4BQ9NT99 713 aa8.85□□□□□ -0.99
PTPRD-212ENST00000488774 GOLGB1Q14789 3259 aaKnown RBP8.85□□□□□ -0.99
PTPRD-212ENST00000488774 QSER1Q2KHR3 1735 aa8.85□□□□□ -0.99
PTPRD-212ENST00000488774 PSDA5PKW4 1024 aaPredicted RBP8.84□□□□□ -0.99
PTPRD-212ENST00000488774 PHKG2P15735 406 aa8.84□□□□□ -0.99
PTPRD-212ENST00000488774 TATP17735 454 aaPredicted RBP8.84□□□□□ -0.99
PTPRD-212ENST00000488774 SMIM5Q71RC9 77 aa8.84□□□□□ -0.99
PTPRD-212ENST00000488774 BCL11BQ9C0K0 894 aaPredicted RBP8.84□□□□□ -0.99
PTPRD-212ENST00000488774 UTRNP46939 3433 aa8.83□□□□□ -1
PTPRD-212ENST00000488774 COL24A1Q17RW2 1714 aa8.83□□□□□ -1
PTPRD-212ENST00000488774 DIAPH1O60610 1272 aaKnown RBP8.83□□□□□ -1
PTPRD-212ENST00000488774 AMIGO3Q86WK7 504 aa8.83□□□□□ -1
PTPRD-212ENST00000488774 RAPGEF4Q8WZA2 1011 aa8.83□□□□□ -1
PTPRD-212ENST00000488774 RSPH6AQ9H0K4 717 aa8.83□□□□□ -1
PTPRD-212ENST00000488774 LGR6Q9HBX8 967 aa8.83□□□□□ -1
PTPRD-212ENST00000488774 NKX1-1Q15270 411 aaPredicted RBP8.82□□□□□ -1
PTPRD-212ENST00000488774 MTHFSDQ2M296 383 aaKnown RBP8.82□□□□□ -1
PTPRD-212ENST00000488774 PIGBQ92521 554 aa8.82□□□□□ -1
PTPRD-212ENST00000488774 SLC4A9Q96Q91 983 aa8.82□□□□□ -1
PTPRD-212ENST00000488774 PRKRIP1Q9H875 184 aaPredicted RBP8.82□□□□□ -1
PTPRD-212ENST00000488774 C4AP0C0L4 1744 aa8.82□□□□□ -1
PTPRD-212ENST00000488774 C4BP0C0L5 1744 aa8.82□□□□□ -1
PTPRD-212ENST00000488774 MRC1P22897 1456 aa8.82□□□□□ -1
PTPRD-212ENST00000488774 PCDH11XQ9BZA7 1347 aa8.81□□□□□ -1
PTPRD-212ENST00000488774 PCDH11YQ9BZA8 1340 aa8.81□□□□□ -1
PTPRD-212ENST00000488774 SENP3-EIF4A1A0A087X0R7 540 aa8.81□□□□□ -1
PTPRD-212ENST00000488774 U2SURPO15042 1029 aaKnown RBP8.81□□□□□ -1
PTPRD-212ENST00000488774 ZNF827Q17R98 1081 aa8.81□□□□□ -1
PTPRD-212ENST00000488774 MPRIPQ6WCQ1 1025 aa8.81□□□□□ -1
PTPRD-212ENST00000488774 CCDC125Q86Z20 511 aa8.81□□□□□ -1
PTPRD-212ENST00000488774 KDM3BQ7LBC6 1761 aa8.81□□□□□ -1
PTPRD-212ENST00000488774 KCPQ6ZWJ8 1503 aa8.8□□□□□ -1
PTPRD-212ENST00000488774 PLSCR1O15162 318 aa8.8□□□□□ -1
PTPRD-212ENST00000488774 BAG6P46379 1132 aa8.8□□□□□ -1
PTPRD-212ENST00000488774 R3HDM1Q15032 1099 aaKnown RBP8.8□□□□□ -1
PTPRD-212ENST00000488774 TXNRD1Q16881 649 aa8.8□□□□□ -1
PTPRD-212ENST00000488774 ZNF530Q6P9A1 599 aaPredicted RBP8.8□□□□□ -1
PTPRD-212ENST00000488774 SYTL4Q96C24 671 aaPredicted RBP8.8□□□□□ -1
PTPRD-212ENST00000488774 PLEKHF1Q96S99 279 aa8.8□□□□□ -1
PTPRD-212ENST00000488774 ASAP1Q9ULH1 1129 aa8.8□□□□□ -1
PTPRD-212ENST00000488774 ZNF831Q5JPB2 1677 aa8.8□□□□□ -1
PTPRD-212ENST00000488774 CICQ96RK0 1608 aaPredicted RBP8.8□□□□□ -1
PTPRD-212ENST00000488774 PRKAR2BP31323 418 aa8.79□□□□□ -1
PTPRD-212ENST00000488774 ITPK1Q13572 414 aa8.78□□□□□ -1
PTPRD-212ENST00000488774 DCTN1Q14203 1278 aa8.78□□□□□ -1
PTPRD-212ENST00000488774 IFNL2Q8IZJ0 200 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms