RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-215ENST00000488452 NBPF4Q96M43 638 aa21.24■□□□□ 0.99
NELFA-215ENST00000488452 TFCP2L1Q9NZI6 479 aa21.23■□□□□ 0.99
NELFA-215ENST00000488452 MAP3K5Q99683 1374 aa21.23■□□□□ 0.99
NELFA-215ENST00000488452 KCNQ4P56696 695 aa21.22■□□□□ 0.99
NELFA-215ENST00000488452 RGPD2P0DJD1 1756 aa21.22■□□□□ 0.99
NELFA-215ENST00000488452 CGNL1Q0VF96 1302 aa21.22■□□□□ 0.99
NELFA-215ENST00000488452 MEGF6O75095 1541 aa21.21■□□□□ 0.99
NELFA-215ENST00000488452 PNPLA7Q6ZV29 1317 aa21.21■□□□□ 0.99
NELFA-215ENST00000488452 NSD2O96028 1365 aa21.21■□□□□ 0.99
NELFA-215ENST00000488452 USP47Q96K76 1375 aa21.21■□□□□ 0.99
NELFA-215ENST00000488452 POLD1P28340 1107 aa21.2■□□□□ 0.98
NELFA-215ENST00000488452 CDCA8Q53HL2 280 aa21.2■□□□□ 0.98
NELFA-215ENST00000488452 USHBP1Q8N6Y0 703 aa21.2■□□□□ 0.98
NELFA-215ENST00000488452 RAPGEF4Q8WZA2 1011 aa21.2■□□□□ 0.98
NELFA-215ENST00000488452 ZNF784Q8NCA9 323 aaPredicted RBP21.19■□□□□ 0.98
NELFA-215ENST00000488452 SMG6Q86US8 1419 aaKnown RBP21.19■□□□□ 0.98
NELFA-215ENST00000488452 QSER1Q2KHR3 1735 aa21.18■□□□□ 0.98
NELFA-215ENST00000488452 DOT1LQ8TEK3 1739 aa21.18■□□□□ 0.98
NELFA-215ENST00000488452 TATP17735 454 aaPredicted RBP21.18■□□□□ 0.98
NELFA-215ENST00000488452 HSP90AB2PQ58FF8 381 aa21.18■□□□□ 0.98
NELFA-215ENST00000488452 CCNL1Q9UK58 526 aaPredicted RBP21.18■□□□□ 0.98
NELFA-215ENST00000488452 SHANK3Q9BYB0 1731 aa21.18■□□□□ 0.98
NELFA-215ENST00000488452 INSRP06213 1382 aa21.17■□□□□ 0.98
NELFA-215ENST00000488452 LY75O60449 1722 aa21.17■□□□□ 0.98
NELFA-215ENST00000488452 TRIM26Q12899 539 aaPredicted RBP21.16■□□□□ 0.98
NELFA-215ENST00000488452 GPR162Q16538 588 aa21.16■□□□□ 0.98
NELFA-215ENST00000488452 KLHL34Q8N239 644 aa21.15■□□□□ 0.98
NELFA-215ENST00000488452 FLT4P35916 1363 aa21.14■□□□□ 0.98
NELFA-215ENST00000488452 KIF24Q5T7B8 1368 aa21.14■□□□□ 0.98
NELFA-215ENST00000488452 COL24A1Q17RW2 1714 aa21.13■□□□□ 0.97
NELFA-215ENST00000488452 CARD14Q9BXL6 1004 aa21.13■□□□□ 0.97
NELFA-215ENST00000488452 UTRNP46939 3433 aa21.12■□□□□ 0.97
NELFA-215ENST00000488452 PCDH11XQ9BZA7 1347 aa21.12■□□□□ 0.97
NELFA-215ENST00000488452 PCDH11YQ9BZA8 1340 aa21.12■□□□□ 0.97
NELFA-215ENST00000488452 MSH5O43196 834 aa21.12■□□□□ 0.97
NELFA-215ENST00000488452 HMGB2P26583 209 aaKnown RBP21.12■□□□□ 0.97
NELFA-215ENST00000488452 CHD4Q14839 1912 aa21.12■□□□□ 0.97
NELFA-215ENST00000488452 TUBGCP6Q96RT7 1819 aa21.11■□□□□ 0.97
NELFA-215ENST00000488452 COL23A1Q86Y22 540 aaPredicted RBP21.11■□□□□ 0.97
NELFA-215ENST00000488452 KIF20BQ96Q89 1820 aa21.1■□□□□ 0.97
NELFA-215ENST00000488452 MPRIPQ6WCQ1 1025 aa21.09■□□□□ 0.97
NELFA-215ENST00000488452 EMILIN1Q9Y6C2 1016 aa21.09■□□□□ 0.97
NELFA-215ENST00000488452 CYP27B1O15528 508 aa21.08■□□□□ 0.97
NELFA-215ENST00000488452 PELP1Q8IZL8 1130 aaKnown RBP21.08■□□□□ 0.97
NELFA-215ENST00000488452 NLGN2Q8NFZ4 835 aa21.07■□□□□ 0.96
NELFA-215ENST00000488452 TIMELESSQ9UNS1 1208 aa21.07■□□□□ 0.96
NELFA-215ENST00000488452 NSD3Q9BZ95 1437 aa21.06■□□□□ 0.96
NELFA-215ENST00000488452 PPM1GO15355 546 aaPredicted RBP21.06■□□□□ 0.96
NELFA-215ENST00000488452 FLAD1Q8NFF5 587 aa21.06■□□□□ 0.96
NELFA-215ENST00000488452 PALLDQ8WX93 1383 aa21.06■□□□□ 0.96
NELFA-215ENST00000488452 SMARCC1Q92922 1105 aaPredicted RBP21.05■□□□□ 0.96
NELFA-215ENST00000488452 WASHC2AQ641Q2 1341 aa21.04■□□□□ 0.96
NELFA-215ENST00000488452 NKX1-1Q15270 411 aaPredicted RBP21.03■□□□□ 0.96
NELFA-215ENST00000488452 MSL1Q68DK7 614 aa21.03■□□□□ 0.96
NELFA-215ENST00000488452 SPG7Q9UQ90 795 aa21.03■□□□□ 0.96
NELFA-215ENST00000488452 C5P01031 1676 aa21.02■□□□□ 0.95
NELFA-215ENST00000488452 GRIN3BO60391 1043 aa21.01■□□□□ 0.95
NELFA-215ENST00000488452 PIGBQ92521 554 aa21.01■□□□□ 0.95
NELFA-215ENST00000488452 NCAPD2Q15021 1401 aa21.01■□□□□ 0.95
NELFA-215ENST00000488452 C1QTNF8P60827 252 aa21■□□□□ 0.95
NELFA-215ENST00000488452 EYA1Q99502 592 aa21■□□□□ 0.95
NELFA-215ENST00000488452 YBX3P16989 372 aaKnown RBP eCLIP20.99■□□□□ 0.95
NELFA-215ENST00000488452 AK7Q96M32 723 aa20.99■□□□□ 0.95
NELFA-215ENST00000488452 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.99■□□□□ 0.95
NELFA-215ENST00000488452 POLKQ9UBT6 870 aa20.99■□□□□ 0.95
NELFA-215ENST00000488452 CD2APQ9Y5K6 639 aa20.99■□□□□ 0.95
NELFA-215ENST00000488452 PKD1L3Q7Z443 1732 aa20.98■□□□□ 0.95
NELFA-215ENST00000488452 ITGB4P16144 1822 aa20.98■□□□□ 0.95
NELFA-215ENST00000488452 TAF1LQ8IZX4 1826 aa20.98■□□□□ 0.95
NELFA-215ENST00000488452 TOGARAM1Q9Y4F4 1720 aa20.98■□□□□ 0.95
NELFA-215ENST00000488452 MAP2P11137 1827 aaKnown RBP20.96■□□□□ 0.95
NELFA-215ENST00000488452 C4BP0C0L5 1744 aa20.95■□□□□ 0.94
NELFA-215ENST00000488452 ANKRD26Q9UPS8 1709 aa20.95■□□□□ 0.94
NELFA-215ENST00000488452 IFNL2Q8IZJ0 200 aa20.95■□□□□ 0.94
NELFA-215ENST00000488452 POLR3GLQ9BT43 218 aa20.95■□□□□ 0.94
NELFA-215ENST00000488452 TMOD3Q9NYL9 352 aa20.95■□□□□ 0.94
NELFA-215ENST00000488452 LOC102724428A0A0B4J2F2 783 aa20.94■□□□□ 0.94
NELFA-215ENST00000488452 PHKG2P15735 406 aa20.94■□□□□ 0.94
NELFA-215ENST00000488452 SIK1P57059 783 aa20.94■□□□□ 0.94
NELFA-215ENST00000488452 AMIGO3Q86WK7 504 aa20.94■□□□□ 0.94
NELFA-215ENST00000488452 CLSPNQ9HAW4 1339 aa20.94■□□□□ 0.94
NELFA-215ENST00000488452 SENP3-EIF4A1A0A087X0R7 540 aa20.93■□□□□ 0.94
NELFA-215ENST00000488452 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.93■□□□□ 0.94
NELFA-215ENST00000488452 GIGYF1O75420 1035 aaPredicted RBP20.93■□□□□ 0.94
NELFA-215ENST00000488452 PHF14O94880 888 aa20.93■□□□□ 0.94
NELFA-215ENST00000488452 SSFA2P28290 1259 aa20.92■□□□□ 0.94
NELFA-215ENST00000488452 TNNT2P45379 298 aaPredicted RBP20.92■□□□□ 0.94
NELFA-215ENST00000488452 EIF4A2Q14240 407 aaKnown RBP20.92■□□□□ 0.94
NELFA-215ENST00000488452 SMIM5Q71RC9 77 aa20.92■□□□□ 0.94
NELFA-215ENST00000488452 LINC00116Q8NCU8 138 aa20.92■□□□□ 0.94
NELFA-215ENST00000488452 ASAP1Q9ULH1 1129 aa20.92■□□□□ 0.94
NELFA-215ENST00000488452 GOLGB1Q14789 3259 aaKnown RBP20.91■□□□□ 0.94
NELFA-215ENST00000488452 PCGF6Q9BYE7 350 aa20.91■□□□□ 0.94
NELFA-215ENST00000488452 ATP6V1AP38606 617 aa20.9■□□□□ 0.94
NELFA-215ENST00000488452 ITPK1Q13572 414 aa20.89■□□□□ 0.93
NELFA-215ENST00000488452 UBR3Q6ZT12 1888 aa20.89■□□□□ 0.93
NELFA-215ENST00000488452 ATG3Q9NT62 314 aa20.88■□□□□ 0.93
NELFA-215ENST00000488452 PLEKHG2Q9H7P9 1386 aa20.87■□□□□ 0.93
NELFA-215ENST00000488452 GNPATO15228 680 aa20.87■□□□□ 0.93
NELFA-215ENST00000488452 EIF4G2P78344 907 aaKnown RBP eCLIP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms