RNA–Protein interactions for RNA: ENST00000488407.1

FGD3-206, Transcript of FYVE, RhoGEF and PH domain containing 3, humanhuman

TSL 5

Gene FGD3, Length 462 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3-206ENST00000488407 MAP3K5Q99683 1374 aa15.77■□□□□ 0.12
FGD3-206ENST00000488407 DDX54Q8TDD1 881 aaKnown RBP15.77■□□□□ 0.12
FGD3-206ENST00000488407 GGNBP2Q9H3C7 697 aa15.77■□□□□ 0.12
FGD3-206ENST00000488407 LY75O60449 1722 aa15.77■□□□□ 0.11
FGD3-206ENST00000488407 DOT1LQ8TEK3 1739 aa15.77■□□□□ 0.11
FGD3-206ENST00000488407 NSD2O96028 1365 aa15.76■□□□□ 0.11
FGD3-206ENST00000488407 RRS1Q15050 365 aaKnown RBP15.76■□□□□ 0.11
FGD3-206ENST00000488407 NBPF6Q5VWK0 638 aa15.76■□□□□ 0.11
FGD3-206ENST00000488407 NBPF4Q96M43 638 aa15.76■□□□□ 0.11
FGD3-206ENST00000488407 LRRC4BQ9NT99 713 aa15.76■□□□□ 0.11
FGD3-206ENST00000488407 COL24A1Q17RW2 1714 aa15.76■□□□□ 0.11
FGD3-206ENST00000488407 ANKRD26Q9UPS8 1709 aa15.75■□□□□ 0.11
FGD3-206ENST00000488407 FBLN1P23142 703 aa15.75■□□□□ 0.11
FGD3-206ENST00000488407 SLC16A10Q8TF71 515 aa15.75■□□□□ 0.11
FGD3-206ENST00000488407 AKT1S1Q96B36 256 aa15.75■□□□□ 0.11
FGD3-206ENST00000488407 NCAPD2Q15021 1401 aa15.75■□□□□ 0.11
FGD3-206ENST00000488407 HMGB2P26583 209 aaKnown RBP15.74■□□□□ 0.11
FGD3-206ENST00000488407 ZNF827Q17R98 1081 aa15.74■□□□□ 0.11
FGD3-206ENST00000488407 RAPGEF4Q8WZA2 1011 aa15.74■□□□□ 0.11
FGD3-206ENST00000488407 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
FGD3-206ENST00000488407 KAT6BQ8WYB5 2073 aa15.73■□□□□ 0.11
FGD3-206ENST00000488407 YY1P25490 414 aa15.73■□□□□ 0.11
FGD3-206ENST00000488407 PRIM1P49642 420 aaKnown RBP15.73■□□□□ 0.11
FGD3-206ENST00000488407 CARD14Q9BXL6 1004 aa15.73■□□□□ 0.11
FGD3-206ENST00000488407 NSD3Q9BZ95 1437 aa15.73■□□□□ 0.11
FGD3-206ENST00000488407 PCDH11XQ9BZA7 1347 aa15.72■□□□□ 0.11
FGD3-206ENST00000488407 PCDH11YQ9BZA8 1340 aa15.72■□□□□ 0.11
FGD3-206ENST00000488407 HSP90AB2PQ58FF8 381 aa15.72■□□□□ 0.11
FGD3-206ENST00000488407 SYT17Q9BSW7 474 aa15.72■□□□□ 0.11
FGD3-206ENST00000488407 PLEKHG2Q9H7P9 1386 aa15.72■□□□□ 0.11
FGD3-206ENST00000488407 TATP17735 454 aaPredicted RBP15.71■□□□□ 0.11
FGD3-206ENST00000488407 FHDC1Q9C0D6 1143 aaPredicted RBP15.71■□□□□ 0.11
FGD3-206ENST00000488407 PKD1L3Q7Z443 1732 aa15.71■□□□□ 0.1
FGD3-206ENST00000488407 ARXQ96QS3 562 aa15.7■□□□□ 0.1
FGD3-206ENST00000488407 PNPLA7Q6ZV29 1317 aa15.69■□□□□ 0.1
FGD3-206ENST00000488407 SYTL4Q96C24 671 aaPredicted RBP15.69■□□□□ 0.1
FGD3-206ENST00000488407 WASHC2AQ641Q2 1341 aa15.68■□□□□ 0.1
FGD3-206ENST00000488407 TUBGCP6Q96RT7 1819 aa15.68■□□□□ 0.1
FGD3-206ENST00000488407 USHBP1Q8N6Y0 703 aa15.67■□□□□ 0.1
FGD3-206ENST00000488407 CCNL1Q9UK58 526 aaPredicted RBP15.67■□□□□ 0.1
FGD3-206ENST00000488407 NKX1-1Q15270 411 aaPredicted RBP15.66■□□□□ 0.1
FGD3-206ENST00000488407 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.66■□□□□ 0.1
FGD3-206ENST00000488407 TFCP2L1Q9NZI6 479 aa15.66■□□□□ 0.1
FGD3-206ENST00000488407 EMILIN1Q9Y6C2 1016 aa15.66■□□□□ 0.1
FGD3-206ENST00000488407 POLD1P28340 1107 aa15.65■□□□□ 0.1
FGD3-206ENST00000488407 C5P01031 1676 aa15.64■□□□□ 0.09
FGD3-206ENST00000488407 CYP27B1O15528 508 aa15.64■□□□□ 0.09
FGD3-206ENST00000488407 MAP2P11137 1827 aaKnown RBP15.64■□□□□ 0.09
FGD3-206ENST00000488407 TOGARAM1Q9Y4F4 1720 aa15.63■□□□□ 0.09
FGD3-206ENST00000488407 SMARCC1Q92922 1105 aaPredicted RBP15.63■□□□□ 0.09
FGD3-206ENST00000488407 PALLDQ8WX93 1383 aa15.62■□□□□ 0.09
FGD3-206ENST00000488407 TAF1LQ8IZX4 1826 aa15.62■□□□□ 0.09
FGD3-206ENST00000488407 EIF4G2P78344 907 aaKnown RBP eCLIP15.62■□□□□ 0.09
FGD3-206ENST00000488407 FLAD1Q8NFF5 587 aa15.62■□□□□ 0.09
FGD3-206ENST00000488407 POLKQ9UBT6 870 aa15.62■□□□□ 0.09
FGD3-206ENST00000488407 SPG7Q9UQ90 795 aa15.62■□□□□ 0.09
FGD3-206ENST00000488407 ITGB4P16144 1822 aa15.61■□□□□ 0.09
FGD3-206ENST00000488407 CHD4Q14839 1912 aa15.61■□□□□ 0.09
FGD3-206ENST00000488407 KCNQ4P56696 695 aa15.61■□□□□ 0.09
FGD3-206ENST00000488407 EYA1Q99502 592 aa15.6■□□□□ 0.09
FGD3-206ENST00000488407 COL23A1Q86Y22 540 aaPredicted RBP15.59■□□□□ 0.09
FGD3-206ENST00000488407 C4BP0C0L5 1744 aa15.58■□□□□ 0.08
FGD3-206ENST00000488407 PPM1GO15355 546 aaPredicted RBP15.58■□□□□ 0.08
FGD3-206ENST00000488407 MPRIPQ6WCQ1 1025 aa15.58■□□□□ 0.08
FGD3-206ENST00000488407 IFNL2Q8IZJ0 200 aa15.57■□□□□ 0.08
FGD3-206ENST00000488407 PIGBQ92521 554 aa15.57■□□□□ 0.08
FGD3-206ENST00000488407 IGSF1Q8N6C5 1336 aa15.57■□□□□ 0.08
FGD3-206ENST00000488407 UTRNP46939 3433 aa15.57■□□□□ 0.08
FGD3-206ENST00000488407 HSPA5P11021 654 aaKnown RBP15.56■□□□□ 0.08
FGD3-206ENST00000488407 EIF4A2Q14240 407 aaKnown RBP15.56■□□□□ 0.08
FGD3-206ENST00000488407 ZNF831Q5JPB2 1677 aa15.55■□□□□ 0.08
FGD3-206ENST00000488407 PHKG2P15735 406 aa15.55■□□□□ 0.08
FGD3-206ENST00000488407 ZNF784Q8NCA9 323 aaPredicted RBP15.55■□□□□ 0.08
FGD3-206ENST00000488407 UBR3Q6ZT12 1888 aa15.54■□□□□ 0.08
FGD3-206ENST00000488407 PANK3Q9H999 370 aa15.54■□□□□ 0.08
FGD3-206ENST00000488407 TMOD3Q9NYL9 352 aa15.54■□□□□ 0.08
FGD3-206ENST00000488407 LOC102724428A0A0B4J2F2 783 aa15.53■□□□□ 0.08
FGD3-206ENST00000488407 SSFA2P28290 1259 aa15.53■□□□□ 0.08
FGD3-206ENST00000488407 SIK1P57059 783 aa15.53■□□□□ 0.08
FGD3-206ENST00000488407 GPR162Q16538 588 aa15.53■□□□□ 0.08
FGD3-206ENST00000488407 AK7Q96M32 723 aa15.53■□□□□ 0.08
FGD3-206ENST00000488407 CD2APQ9Y5K6 639 aa15.53■□□□□ 0.08
FGD3-206ENST00000488407 MSH5O43196 834 aa15.52■□□□□ 0.08
FGD3-206ENST00000488407 HSP90AB1P08238 724 aaKnown RBP15.52■□□□□ 0.08
FGD3-206ENST00000488407 ZEB1P37275 1124 aaPredicted RBP15.52■□□□□ 0.08
FGD3-206ENST00000488407 ERVV-2B6SEH9 535 aa15.51■□□□□ 0.07
FGD3-206ENST00000488407 GRIN3BO60391 1043 aa15.51■□□□□ 0.07
FGD3-206ENST00000488407 NLGN2Q8NFZ4 835 aa15.51■□□□□ 0.07
FGD3-206ENST00000488407 POLR3GLQ9BT43 218 aa15.51■□□□□ 0.07
FGD3-206ENST00000488407 KDRP35968 1356 aa15.5■□□□□ 0.07
FGD3-206ENST00000488407 AMOTQ4VCS5 1084 aa15.5■□□□□ 0.07
FGD3-206ENST00000488407 KLHL34Q8N239 644 aa15.5■□□□□ 0.07
FGD3-206ENST00000488407 DCAF5Q96JK2 942 aa15.5■□□□□ 0.07
FGD3-206ENST00000488407 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.49■□□□□ 0.07
FGD3-206ENST00000488407 TNNT2P45379 298 aaPredicted RBP15.49■□□□□ 0.07
FGD3-206ENST00000488407 PLEKHO1Q53GL0 409 aaPredicted RBP15.49■□□□□ 0.07
FGD3-206ENST00000488407 LINC00116Q8NCU8 138 aa15.48■□□□□ 0.07
FGD3-206ENST00000488407 ATG3Q9NT62 314 aa15.48■□□□□ 0.07
FGD3-206ENST00000488407 ASAP1Q9ULH1 1129 aa15.48■□□□□ 0.07
FGD3-206ENST00000488407 MSL1Q68DK7 614 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms