RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 QSER1Q2KHR3 1735 aa16.29■□□□□ 0.2
HLA-DOB-209ENST00000488325 PLEKHG3A1L390 1219 aa16.29■□□□□ 0.2
HLA-DOB-209ENST00000488325 SLC12A5Q9H2X9 1139 aa16.29■□□□□ 0.2
HLA-DOB-209ENST00000488325 TERF2IPQ9NYB0 399 aa16.29■□□□□ 0.2
HLA-DOB-209ENST00000488325 AXIN2Q9Y2T1 843 aa16.28■□□□□ 0.2
HLA-DOB-209ENST00000488325 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
HLA-DOB-209ENST00000488325 TNS2Q63HR2 1409 aa16.28■□□□□ 0.2
HLA-DOB-209ENST00000488325 SLC34A2O95436 690 aa16.27■□□□□ 0.2
HLA-DOB-209ENST00000488325 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
HLA-DOB-209ENST00000488325 AMER1Q5JTC6 1135 aaPredicted RBP16.27■□□□□ 0.2
HLA-DOB-209ENST00000488325 HDGFL2Q7Z4V5 671 aaPredicted RBP16.27■□□□□ 0.2
HLA-DOB-209ENST00000488325 CARD10Q9BWT7 1032 aa16.27■□□□□ 0.2
HLA-DOB-209ENST00000488325 COL18A1P39060 1754 aa16.27■□□□□ 0.2
HLA-DOB-209ENST00000488325 USP6P35125 1406 aa16.27■□□□□ 0.19
HLA-DOB-209ENST00000488325 BTAF1O14981 1849 aa16.26■□□□□ 0.19
HLA-DOB-209ENST00000488325 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
HLA-DOB-209ENST00000488325 MRS2Q9HD23 443 aa16.26■□□□□ 0.19
HLA-DOB-209ENST00000488325 NSD3Q9BZ95 1437 aa16.26■□□□□ 0.19
HLA-DOB-209ENST00000488325 TFCP2L1Q9NZI6 479 aa16.25■□□□□ 0.19
HLA-DOB-209ENST00000488325 SLIT3O75094 1523 aa16.24■□□□□ 0.19
HLA-DOB-209ENST00000488325 CGNL1Q0VF96 1302 aa16.24■□□□□ 0.19
HLA-DOB-209ENST00000488325 CSB-PGBD3P0DP91 1061 aa16.24■□□□□ 0.19
HLA-DOB-209ENST00000488325 YTHDC1Q96MU7 727 aaKnown RBP16.24■□□□□ 0.19
HLA-DOB-209ENST00000488325 CARD14Q9BXL6 1004 aa16.24■□□□□ 0.19
HLA-DOB-209ENST00000488325 NSD2O96028 1365 aa16.24■□□□□ 0.19
HLA-DOB-209ENST00000488325 TUBGCP6Q96RT7 1819 aa16.24■□□□□ 0.19
HLA-DOB-209ENST00000488325 CENPBP07199 599 aaPredicted RBP16.23■□□□□ 0.19
HLA-DOB-209ENST00000488325 NLRP6P59044 892 aa16.23■□□□□ 0.19
HLA-DOB-209ENST00000488325 PIAS4Q8N2W9 510 aaPredicted RBP16.23■□□□□ 0.19
HLA-DOB-209ENST00000488325 A0A1W2PP64 1363 aa16.23■□□□□ 0.19
HLA-DOB-209ENST00000488325 PPIP5K1Q6PFW1 1433 aa16.22■□□□□ 0.19
HLA-DOB-209ENST00000488325 SLC27A3Q5K4L6 730 aa16.22■□□□□ 0.19
HLA-DOB-209ENST00000488325 CABP1Q9NZU7 370 aa16.22■□□□□ 0.19
HLA-DOB-209ENST00000488325 CPSF1Q10570 1443 aaKnown RBP16.21■□□□□ 0.19
HLA-DOB-209ENST00000488325 ABCC6O95255 1503 aa16.21■□□□□ 0.19
HLA-DOB-209ENST00000488325 JMYQ8N9B5 988 aa16.21■□□□□ 0.19
HLA-DOB-209ENST00000488325 TOMM70O94826 608 aa16.2■□□□□ 0.18
HLA-DOB-209ENST00000488325 KLRG1Q96E93 195 aa16.2■□□□□ 0.18
HLA-DOB-209ENST00000488325 WDR90Q96KV7 1748 aa16.19■□□□□ 0.18
HLA-DOB-209ENST00000488325 RGPD5Q99666 1765 aa16.19■□□□□ 0.18
HLA-DOB-209ENST00000488325 CD163L1Q9NR16 1453 aa16.19■□□□□ 0.18
HLA-DOB-209ENST00000488325 KCNQ4P56696 695 aa16.19■□□□□ 0.18
HLA-DOB-209ENST00000488325 CD2APQ9Y5K6 639 aa16.19■□□□□ 0.18
HLA-DOB-209ENST00000488325 ARHGEF25Q86VW2 580 aa16.18■□□□□ 0.18
HLA-DOB-209ENST00000488325 ZNF692Q9BU19 519 aaPredicted RBP16.18■□□□□ 0.18
HLA-DOB-209ENST00000488325 KAT6BQ8WYB5 2073 aa16.17■□□□□ 0.18
HLA-DOB-209ENST00000488325 MSH5O43196 834 aa16.17■□□□□ 0.18
HLA-DOB-209ENST00000488325 HTRA3P83110 453 aa16.17■□□□□ 0.18
HLA-DOB-209ENST00000488325 CCDC184Q52MB2 194 aa16.17■□□□□ 0.18
HLA-DOB-209ENST00000488325 MSL1Q68DK7 614 aa16.17■□□□□ 0.18
HLA-DOB-209ENST00000488325 MORC1Q86VD1 984 aa16.17■□□□□ 0.18
HLA-DOB-209ENST00000488325 PCNTO95613 3336 aa16.16■□□□□ 0.18
HLA-DOB-209ENST00000488325 EDC4Q6P2E9 1401 aaKnown RBP16.16■□□□□ 0.18
HLA-DOB-209ENST00000488325 PPP2R1AP30153 589 aa16.15■□□□□ 0.18
HLA-DOB-209ENST00000488325 COL23A1Q86Y22 540 aaPredicted RBP16.15■□□□□ 0.18
HLA-DOB-209ENST00000488325 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
HLA-DOB-209ENST00000488325 PIK3C2AO00443 1686 aa16.14■□□□□ 0.17
HLA-DOB-209ENST00000488325 FAM9BQ8IZU0 186 aa16.13■□□□□ 0.17
HLA-DOB-209ENST00000488325 SOX12O15370 315 aa16.12■□□□□ 0.17
HLA-DOB-209ENST00000488325 MON2Q7Z3U7 1717 aa16.11■□□□□ 0.17
HLA-DOB-209ENST00000488325 IL2RBP14784 551 aa16.11■□□□□ 0.17
HLA-DOB-209ENST00000488325 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
HLA-DOB-209ENST00000488325 IGSF1Q8N6C5 1336 aa16.11■□□□□ 0.17
HLA-DOB-209ENST00000488325 KIF20BQ96Q89 1820 aa16.1■□□□□ 0.17
HLA-DOB-209ENST00000488325 KCNH5Q8NCM2 988 aa16.1■□□□□ 0.17
HLA-DOB-209ENST00000488325 NMRK2Q9NPI5 230 aa16.1■□□□□ 0.17
HLA-DOB-209ENST00000488325 ANKRD26Q9UPS8 1709 aa16.1■□□□□ 0.17
HLA-DOB-209ENST00000488325 FYB1O15117 783 aa16.09■□□□□ 0.17
HLA-DOB-209ENST00000488325 RBM46Q8TBY0 533 aaKnown RBP16.09■□□□□ 0.17
HLA-DOB-209ENST00000488325 NLRP2Q9NX02 1062 aa16.09■□□□□ 0.17
HLA-DOB-209ENST00000488325 GGNBP2Q9H3C7 697 aa16.08■□□□□ 0.16
HLA-DOB-209ENST00000488325 INSRP06213 1382 aa16.08■□□□□ 0.16
HLA-DOB-209ENST00000488325 LY75O60449 1722 aa16.08■□□□□ 0.16
HLA-DOB-209ENST00000488325 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.07■□□□□ 0.16
HLA-DOB-209ENST00000488325 SYTL4Q96C24 671 aaPredicted RBP16.07■□□□□ 0.16
HLA-DOB-209ENST00000488325 CCNL1Q9UK58 526 aaPredicted RBP16.07■□□□□ 0.16
HLA-DOB-209ENST00000488325 CICQ96RK0 1608 aaPredicted RBP16.07■□□□□ 0.16
HLA-DOB-209ENST00000488325 NFAT5O94916 1531 aa16.06■□□□□ 0.16
HLA-DOB-209ENST00000488325 TTC21AQ8NDW8 1320 aa16.06■□□□□ 0.16
HLA-DOB-209ENST00000488325 HNRNPUQ00839 825 aaKnown RBP eCLIP16.06■□□□□ 0.16
HLA-DOB-209ENST00000488325 CFAP53Q96M91 514 aa16.06■□□□□ 0.16
HLA-DOB-209ENST00000488325 PCDH10Q9P2E7 1040 aa16.06■□□□□ 0.16
HLA-DOB-209ENST00000488325 ERBB3P21860 1342 aa16.05■□□□□ 0.16
HLA-DOB-209ENST00000488325 TTC21BQ7Z4L5 1316 aa16.05■□□□□ 0.16
HLA-DOB-209ENST00000488325 HSPA1AP0DMV8 641 aaKnown RBP16.05■□□□□ 0.16
HLA-DOB-209ENST00000488325 HSPA1BP0DMV9 641 aaKnown RBP16.05■□□□□ 0.16
HLA-DOB-209ENST00000488325 PRIM1P49642 420 aaKnown RBP16.05■□□□□ 0.16
HLA-DOB-209ENST00000488325 COG3Q96JB2 828 aa16.05■□□□□ 0.16
HLA-DOB-209ENST00000488325 TNNT2P45379 298 aaPredicted RBP16.04■□□□□ 0.16
HLA-DOB-209ENST00000488325 FSTL1Q12841 308 aa16.04■□□□□ 0.16
HLA-DOB-209ENST00000488325 WDR43Q15061 677 aaKnown RBP eCLIP16.04■□□□□ 0.16
HLA-DOB-209ENST00000488325 C16orf71Q8IYS4 520 aaPredicted RBP16.04■□□□□ 0.16
HLA-DOB-209ENST00000488325 DDX54Q8TDD1 881 aaKnown RBP16.04■□□□□ 0.16
HLA-DOB-209ENST00000488325 NME9Q86XW9 330 aa16.02■□□□□ 0.16
HLA-DOB-209ENST00000488325 MTHFSP49914 203 aa16.01■□□□□ 0.15
HLA-DOB-209ENST00000488325 DOT1LQ8TEK3 1739 aa16■□□□□ 0.15
HLA-DOB-209ENST00000488325 FLAD1Q8NFF5 587 aa16■□□□□ 0.15
HLA-DOB-209ENST00000488325 ZBED9Q6R2W3 1325 aa15.98■□□□□ 0.15
HLA-DOB-209ENST00000488325 ANKRD24Q8TF21 1146 aa15.98■□□□□ 0.15
HLA-DOB-209ENST00000488325 USP31Q70CQ4 1352 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms