RNA–Protein interactions for RNA: ENST00000488311.1

PLD3-213, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 750 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-213ENST00000488311 KAT6BQ8WYB5 2073 aa17.02■□□□□ 0.32
PLD3-213ENST00000488311 PANK3Q9H999 370 aa17.02■□□□□ 0.32
PLD3-213ENST00000488311 PAPPAQ13219 1627 aa17.02■□□□□ 0.31
PLD3-213ENST00000488311 NSD2O96028 1365 aa17.02■□□□□ 0.31
PLD3-213ENST00000488311 CGNL1Q0VF96 1302 aa17.01■□□□□ 0.31
PLD3-213ENST00000488311 PPM1GO15355 546 aaPredicted RBP17.01■□□□□ 0.31
PLD3-213ENST00000488311 NBPF14Q5TI25 921 aa17.01■□□□□ 0.31
PLD3-213ENST00000488311 TNNT2P45379 298 aaPredicted RBP17■□□□□ 0.31
PLD3-213ENST00000488311 SMG6Q86US8 1419 aaKnown RBP17■□□□□ 0.31
PLD3-213ENST00000488311 ZCRB1Q8TBF4 217 aaKnown RBP16.99■□□□□ 0.31
PLD3-213ENST00000488311 LRRC4BQ9NT99 713 aa16.99■□□□□ 0.31
PLD3-213ENST00000488311 POLKQ9UBT6 870 aa16.99■□□□□ 0.31
PLD3-213ENST00000488311 KIF24Q5T7B8 1368 aa16.99■□□□□ 0.31
PLD3-213ENST00000488311 NCAPD2Q15021 1401 aa16.98■□□□□ 0.31
PLD3-213ENST00000488311 KCNQ4P56696 695 aa16.98■□□□□ 0.31
PLD3-213ENST00000488311 TOGARAM1Q9Y4F4 1720 aa16.97■□□□□ 0.31
PLD3-213ENST00000488311 PRIM1P49642 420 aaKnown RBP16.97■□□□□ 0.31
PLD3-213ENST00000488311 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.31
PLD3-213ENST00000488311 ZNF827Q17R98 1081 aa16.96■□□□□ 0.31
PLD3-213ENST00000488311 SYTL4Q96C24 671 aaPredicted RBP16.96■□□□□ 0.31
PLD3-213ENST00000488311 PKD1L3Q7Z443 1732 aa16.96■□□□□ 0.3
PLD3-213ENST00000488311 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.3
PLD3-213ENST00000488311 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
PLD3-213ENST00000488311 EYA1Q99502 592 aa16.95■□□□□ 0.3
PLD3-213ENST00000488311 CYP27B1O15528 508 aa16.94■□□□□ 0.3
PLD3-213ENST00000488311 ZBTB7AO95365 584 aa16.94■□□□□ 0.3
PLD3-213ENST00000488311 TATP17735 454 aaPredicted RBP16.94■□□□□ 0.3
PLD3-213ENST00000488311 SLC15A2Q16348 729 aa16.94■□□□□ 0.3
PLD3-213ENST00000488311 LY75O60449 1722 aa16.93■□□□□ 0.3
PLD3-213ENST00000488311 EIF4A2Q14240 407 aaKnown RBP16.93■□□□□ 0.3
PLD3-213ENST00000488311 TUBGCP6Q96RT7 1819 aa16.92■□□□□ 0.3
PLD3-213ENST00000488311 STK32BQ9NY57 414 aa16.92■□□□□ 0.3
PLD3-213ENST00000488311 SPON1Q9HCB6 807 aa16.91■□□□□ 0.3
PLD3-213ENST00000488311 ATF5Q9Y2D1 282 aaPredicted RBP16.9■□□□□ 0.3
PLD3-213ENST00000488311 PCDH11XQ9BZA7 1347 aa16.9■□□□□ 0.3
PLD3-213ENST00000488311 PCDH11YQ9BZA8 1340 aa16.9■□□□□ 0.3
PLD3-213ENST00000488311 PTGER2P43116 358 aa16.89■□□□□ 0.29
PLD3-213ENST00000488311 AMER1Q5JTC6 1135 aaPredicted RBP16.89■□□□□ 0.29
PLD3-213ENST00000488311 ITGB4P16144 1822 aa16.89■□□□□ 0.29
PLD3-213ENST00000488311 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
PLD3-213ENST00000488311 MORC1Q86VD1 984 aa16.87■□□□□ 0.29
PLD3-213ENST00000488311 IGSF1Q8N6C5 1336 aa16.87■□□□□ 0.29
PLD3-213ENST00000488311 MPRIPQ6WCQ1 1025 aa16.85■□□□□ 0.29
PLD3-213ENST00000488311 AEBP1Q8IUX7 1158 aa16.85■□□□□ 0.29
PLD3-213ENST00000488311 SGIP1Q9BQI5 828 aa16.85■□□□□ 0.29
PLD3-213ENST00000488311 KNSTRNQ9Y448 316 aa16.85■□□□□ 0.29
PLD3-213ENST00000488311 UTRNP46939 3433 aa16.84■□□□□ 0.29
PLD3-213ENST00000488311 QSER1Q2KHR3 1735 aa16.84■□□□□ 0.29
PLD3-213ENST00000488311 PER1O15534 1290 aaPredicted RBP16.84■□□□□ 0.29
PLD3-213ENST00000488311 SLC27A3Q5K4L6 730 aa16.84■□□□□ 0.29
PLD3-213ENST00000488311 PPP1R1BQ9UD71 204 aaPredicted RBP16.84■□□□□ 0.29
PLD3-213ENST00000488311 CCNL1Q9UK58 526 aaPredicted RBP16.84■□□□□ 0.29
PLD3-213ENST00000488311 PNPLA7Q6ZV29 1317 aa16.84■□□□□ 0.29
PLD3-213ENST00000488311 NKX1-1Q15270 411 aaPredicted RBP16.83■□□□□ 0.28
PLD3-213ENST00000488311 C5P01031 1676 aa16.82■□□□□ 0.28
PLD3-213ENST00000488311 PALLDQ8WX93 1383 aa16.82■□□□□ 0.28
PLD3-213ENST00000488311 PHKG2P15735 406 aa16.82■□□□□ 0.28
PLD3-213ENST00000488311 PIGBQ92521 554 aa16.82■□□□□ 0.28
PLD3-213ENST00000488311 TAF1LQ8IZX4 1826 aa16.82■□□□□ 0.28
PLD3-213ENST00000488311 CC2D1BQ5T0F9 858 aaKnown RBP16.81■□□□□ 0.28
PLD3-213ENST00000488311 MTFR1LQ9H019 292 aa16.81■□□□□ 0.28
PLD3-213ENST00000488311 SPG7Q9UQ90 795 aa16.81■□□□□ 0.28
PLD3-213ENST00000488311 CNGB1Q14028 1251 aaPredicted RBP16.8■□□□□ 0.28
PLD3-213ENST00000488311 SMIM5Q71RC9 77 aa16.8■□□□□ 0.28
PLD3-213ENST00000488311 AMIGO3Q86WK7 504 aa16.8■□□□□ 0.28
PLD3-213ENST00000488311 IL13P35225 146 aa16.79■□□□□ 0.28
PLD3-213ENST00000488311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.79■□□□□ 0.28
PLD3-213ENST00000488311 COL24A1Q17RW2 1714 aa16.79■□□□□ 0.28
PLD3-213ENST00000488311 KDM6AO15550 1401 aaPredicted RBP16.79■□□□□ 0.28
PLD3-213ENST00000488311 FHDC1Q9C0D6 1143 aaPredicted RBP16.78■□□□□ 0.28
PLD3-213ENST00000488311 TFCP2L1Q9NZI6 479 aa16.78■□□□□ 0.28
PLD3-213ENST00000488311 ASAP1Q9ULH1 1129 aa16.78■□□□□ 0.28
PLD3-213ENST00000488311 GOLGB1Q14789 3259 aaKnown RBP16.78■□□□□ 0.28
PLD3-213ENST00000488311 C4BP0C0L5 1744 aa16.77■□□□□ 0.28
PLD3-213ENST00000488311 MTHFSP49914 203 aa16.77■□□□□ 0.28
PLD3-213ENST00000488311 COL23A1Q86Y22 540 aaPredicted RBP16.77■□□□□ 0.28
PLD3-213ENST00000488311 IFNL2Q8IZJ0 200 aa16.77■□□□□ 0.28
PLD3-213ENST00000488311 SULT6B1Q6IMI4 303 aa16.76■□□□□ 0.27
PLD3-213ENST00000488311 KDRP35968 1356 aa16.76■□□□□ 0.27
PLD3-213ENST00000488311 COL3A1P02461 1466 aaPredicted RBP16.74■□□□□ 0.27
PLD3-213ENST00000488311 ITPK1Q13572 414 aa16.74■□□□□ 0.27
PLD3-213ENST00000488311 ZNF530Q6P9A1 599 aaPredicted RBP16.74■□□□□ 0.27
PLD3-213ENST00000488311 LINC00116Q8NCU8 138 aa16.74■□□□□ 0.27
PLD3-213ENST00000488311 SYT17Q9BSW7 474 aa16.74■□□□□ 0.27
PLD3-213ENST00000488311 ATG3Q9NT62 314 aa16.74■□□□□ 0.27
PLD3-213ENST00000488311 TMOD3Q9NYL9 352 aa16.74■□□□□ 0.27
PLD3-213ENST00000488311 MSL1Q68DK7 614 aa16.73■□□□□ 0.27
PLD3-213ENST00000488311 SLC4A9Q96Q91 983 aa16.73■□□□□ 0.27
PLD3-213ENST00000488311 ARXQ96QS3 562 aa16.73■□□□□ 0.27
PLD3-213ENST00000488311 UBR3Q6ZT12 1888 aa16.73■□□□□ 0.27
PLD3-213ENST00000488311 LOC102724428A0A0B4J2F2 783 aa16.72■□□□□ 0.27
PLD3-213ENST00000488311 HMOX1P09601 288 aa16.72■□□□□ 0.27
PLD3-213ENST00000488311 SIK1P57059 783 aa16.72■□□□□ 0.27
PLD3-213ENST00000488311 PLEKHG2Q9H7P9 1386 aa16.72■□□□□ 0.27
PLD3-213ENST00000488311 PLEKHO1Q53GL0 409 aaPredicted RBP16.71■□□□□ 0.27
PLD3-213ENST00000488311 SMARCC1Q92922 1105 aaPredicted RBP16.71■□□□□ 0.27
PLD3-213ENST00000488311 NPC1L1Q9UHC9 1359 aa16.7■□□□□ 0.26
PLD3-213ENST00000488311 MSH5O43196 834 aa16.7■□□□□ 0.26
PLD3-213ENST00000488311 SLC16A10Q8TF71 515 aa16.7■□□□□ 0.26
PLD3-213ENST00000488311 PHF14O94880 888 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms