RNA–Protein interactions for RNA: ENST00000488196.5

STRADB-209, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-209ENST00000488196 EIF4A2Q14240 407 aaKnown RBP31.85■■■□□ 2.69
STRADB-209ENST00000488196 SHANK3Q9BYB0 1731 aa31.85■■■□□ 2.69
STRADB-209ENST00000488196 TATP17735 454 aaPredicted RBP31.84■■■□□ 2.69
STRADB-209ENST00000488196 PARD3Q8TEW0 1356 aa31.83■■■□□ 2.69
STRADB-209ENST00000488196 CNGB1Q14028 1251 aaPredicted RBP31.83■■■□□ 2.69
STRADB-209ENST00000488196 NCAPD2Q15021 1401 aa31.81■■■□□ 2.68
STRADB-209ENST00000488196 NHSQ6T4R5 1651 aa31.8■■■□□ 2.68
STRADB-209ENST00000488196 RREB1Q92766 1687 aa31.8■■■□□ 2.68
STRADB-209ENST00000488196 PSDA5PKW4 1024 aaPredicted RBP31.79■■■□□ 2.68
STRADB-209ENST00000488196 PLSCR1O15162 318 aa31.79■■■□□ 2.68
STRADB-209ENST00000488196 NUP188Q5SRE5 1749 aa31.77■■■□□ 2.68
STRADB-209ENST00000488196 RGPD3A6NKT7 1758 aaPredicted RBP31.75■■■□□ 2.67
STRADB-209ENST00000488196 RGPD4Q7Z3J3 1758 aa31.75■■■□□ 2.67
STRADB-209ENST00000488196 NPC1L1Q9UHC9 1359 aa31.74■■■□□ 2.67
STRADB-209ENST00000488196 BTAF1O14981 1849 aa31.73■■■□□ 2.67
STRADB-209ENST00000488196 MTHFSP49914 203 aa31.73■■■□□ 2.67
STRADB-209ENST00000488196 R3HDM1Q15032 1099 aaKnown RBP31.73■■■□□ 2.67
STRADB-209ENST00000488196 PROM2Q8N271 834 aa31.73■■■□□ 2.67
STRADB-209ENST00000488196 PRIM1P49642 420 aaKnown RBP31.71■■■□□ 2.67
STRADB-209ENST00000488196 DOT1LQ8TEK3 1739 aa31.71■■■□□ 2.67
STRADB-209ENST00000488196 IGSF1Q8N6C5 1336 aa31.71■■■□□ 2.67
STRADB-209ENST00000488196 PCDH11XQ9BZA7 1347 aa31.71■■■□□ 2.67
STRADB-209ENST00000488196 PCDH11YQ9BZA8 1340 aa31.71■■■□□ 2.67
STRADB-209ENST00000488196 PKD1L3Q7Z443 1732 aa31.7■■■□□ 2.67
STRADB-209ENST00000488196 CYP27B1O15528 508 aa31.7■■■□□ 2.67
STRADB-209ENST00000488196 SYTL4Q96C24 671 aaPredicted RBP31.7■■■□□ 2.67
STRADB-209ENST00000488196 IL13P35225 146 aa31.67■■■□□ 2.66
STRADB-209ENST00000488196 TXNRD1Q16881 649 aa31.67■■■□□ 2.66
STRADB-209ENST00000488196 NBPF14Q5TI25 921 aa31.66■■■□□ 2.66
STRADB-209ENST00000488196 SPG7Q9UQ90 795 aa31.66■■■□□ 2.66
STRADB-209ENST00000488196 AEBP1Q8IUX7 1158 aa31.64■■■□□ 2.66
STRADB-209ENST00000488196 SRCAPQ6ZRS2 3230 aa31.63■■■□□ 2.65
STRADB-209ENST00000488196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.62■■■□□ 2.65
STRADB-209ENST00000488196 ANO8Q9HCE9 1232 aaPredicted RBP31.61■■■□□ 2.65
STRADB-209ENST00000488196 SULT6B1Q6IMI4 303 aa31.6■■■□□ 2.65
STRADB-209ENST00000488196 TOGARAM1Q9Y4F4 1720 aa31.57■■■□□ 2.64
STRADB-209ENST00000488196 DIAPH1O60610 1272 aaKnown RBP31.56■■■□□ 2.64
STRADB-209ENST00000488196 PHKG2P15735 406 aa31.56■■■□□ 2.64
STRADB-209ENST00000488196 NKX1-1Q15270 411 aaPredicted RBP31.56■■■□□ 2.64
STRADB-209ENST00000488196 ITGB4P16144 1822 aa31.55■■■□□ 2.64
STRADB-209ENST00000488196 IFNL2Q8IZJ0 200 aa31.55■■■□□ 2.64
STRADB-209ENST00000488196 PLEKHO1Q53GL0 409 aaPredicted RBP31.54■■■□□ 2.64
STRADB-209ENST00000488196 MPRIPQ6WCQ1 1025 aa31.54■■■□□ 2.64
STRADB-209ENST00000488196 LRRC4BQ9NT99 713 aa31.54■■■□□ 2.64
STRADB-209ENST00000488196 KDRP35968 1356 aa31.54■■■□□ 2.64
STRADB-209ENST00000488196 PLEKHG2Q9H7P9 1386 aa31.53■■■□□ 2.64
STRADB-209ENST00000488196 COL3A1P02461 1466 aaPredicted RBP31.52■■■□□ 2.64
STRADB-209ENST00000488196 HMOX1P09601 288 aa31.51■■■□□ 2.63
STRADB-209ENST00000488196 KCNQ4P56696 695 aa31.51■■■□□ 2.63
STRADB-209ENST00000488196 ZNF530Q6P9A1 599 aaPredicted RBP31.5■■■□□ 2.63
STRADB-209ENST00000488196 STK32BQ9NY57 414 aa31.5■■■□□ 2.63
STRADB-209ENST00000488196 PPP2R1AP30153 589 aa31.49■■■□□ 2.63
STRADB-209ENST00000488196 AMOTQ4VCS5 1084 aa31.49■■■□□ 2.63
STRADB-209ENST00000488196 LY75O60449 1722 aa31.49■■■□□ 2.63
STRADB-209ENST00000488196 ZEB1P37275 1124 aaPredicted RBP31.48■■■□□ 2.63
STRADB-209ENST00000488196 SLC15A2Q16348 729 aa31.47■■■□□ 2.63
STRADB-209ENST00000488196 SLC27A3Q5K4L6 730 aa31.47■■■□□ 2.63
STRADB-209ENST00000488196 PIGBQ92521 554 aa31.47■■■□□ 2.63
STRADB-209ENST00000488196 PAPPAQ13219 1627 aa31.46■■■□□ 2.63
STRADB-209ENST00000488196 DDX10Q13206 875 aaKnown RBP31.46■■■□□ 2.63
STRADB-209ENST00000488196 PDGFDQ9GZP0 370 aaPredicted RBP31.45■■■□□ 2.63
STRADB-209ENST00000488196 LRP5O75197 1615 aa31.45■■■□□ 2.62
STRADB-209ENST00000488196 U2SURPO15042 1029 aaKnown RBP31.44■■■□□ 2.62
STRADB-209ENST00000488196 ZNF827Q17R98 1081 aa31.43■■■□□ 2.62
STRADB-209ENST00000488196 CFAP53Q96M91 514 aa31.43■■■□□ 2.62
STRADB-209ENST00000488196 CCNL1Q9UK58 526 aaPredicted RBP31.43■■■□□ 2.62
STRADB-209ENST00000488196 TMOD3Q9NYL9 352 aa31.42■■■□□ 2.62
STRADB-209ENST00000488196 PALLDQ8WX93 1383 aa31.42■■■□□ 2.62
STRADB-209ENST00000488196 HSP90AB1P08238 724 aaKnown RBP31.41■■■□□ 2.62
STRADB-209ENST00000488196 C1orf141Q5JVX7 400 aa31.41■■■□□ 2.62
STRADB-209ENST00000488196 DCAF5Q96JK2 942 aa31.4■■■□□ 2.62
STRADB-209ENST00000488196 CASZ1Q86V15 1759 aa31.39■■■□□ 2.62
STRADB-209ENST00000488196 KDM6AO15550 1401 aaPredicted RBP31.39■■■□□ 2.62
STRADB-209ENST00000488196 SMARCC1Q92922 1105 aaPredicted RBP31.38■■■□□ 2.61
STRADB-209ENST00000488196 AKT1S1Q96B36 256 aa31.38■■■□□ 2.61
STRADB-209ENST00000488196 ASAP1Q9ULH1 1129 aa31.37■■■□□ 2.61
STRADB-209ENST00000488196 ERVV-2B6SEH9 535 aa31.36■■■□□ 2.61
STRADB-209ENST00000488196 MTHFSDQ2M296 383 aaKnown RBP31.34■■■□□ 2.61
STRADB-209ENST00000488196 ZBTB7AO95365 584 aa31.33■■■□□ 2.61
STRADB-209ENST00000488196 AKAP4Q5JQC9 854 aa31.33■■■□□ 2.61
STRADB-209ENST00000488196 SPON1Q9HCB6 807 aa31.33■■■□□ 2.61
STRADB-209ENST00000488196 CABP4P57796 275 aa31.32■■■□□ 2.6
STRADB-209ENST00000488196 ATG3Q9NT62 314 aa31.32■■■□□ 2.6
STRADB-209ENST00000488196 NUDCQ9Y266 331 aa31.32■■■□□ 2.6
STRADB-209ENST00000488196 TAF1LQ8IZX4 1826 aa31.31■■■□□ 2.6
STRADB-209ENST00000488196 TUBGCP6Q96RT7 1819 aa31.31■■■□□ 2.6
STRADB-209ENST00000488196 C5P01031 1676 aa31.3■■■□□ 2.6
STRADB-209ENST00000488196 TFCP2L1Q9NZI6 479 aa31.3■■■□□ 2.6
STRADB-209ENST00000488196 SCN11AQ9UI33 1791 aa31.3■■■□□ 2.6
STRADB-209ENST00000488196 LOC102724428A0A0B4J2F2 783 aa31.28■■■□□ 2.6
STRADB-209ENST00000488196 U2AF1L5P0DN76 240 aaPredicted RBP31.28■■■□□ 2.6
STRADB-209ENST00000488196 SIK1P57059 783 aa31.28■■■□□ 2.6
STRADB-209ENST00000488196 U2AF1Q01081 240 aaKnown RBP eCLIP31.28■■■□□ 2.6
STRADB-209ENST00000488196 LGR6Q9HBX8 967 aa31.28■■■□□ 2.6
STRADB-209ENST00000488196 ATF5Q9Y2D1 282 aaPredicted RBP31.28■■■□□ 2.6
STRADB-209ENST00000488196 NFATC2IPQ8NCF5 419 aa31.27■■■□□ 2.6
STRADB-209ENST00000488196 RSPH6AQ9H0K4 717 aa31.27■■■□□ 2.6
STRADB-209ENST00000488196 PNPLA7Q6ZV29 1317 aa31.26■■■□□ 2.6
STRADB-209ENST00000488196 VIRMAQ69YN4 1812 aaKnown RBP31.26■■■□□ 2.6
STRADB-209ENST00000488196 PRKAR2BP31323 418 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms