RNA–Protein interactions for RNA: ENST00000488193.5

TFAP2A-215, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-215ENST00000488193 ABCA3Q99758 1704 aa18.66■□□□□ 0.58
TFAP2A-215ENST00000488193 VAMP4O75379 141 aa18.66■□□□□ 0.58
TFAP2A-215ENST00000488193 PDE3AQ14432 1141 aa18.66■□□□□ 0.58
TFAP2A-215ENST00000488193 ABCC6O95255 1503 aa18.66■□□□□ 0.58
TFAP2A-215ENST00000488193 KIAA0232Q92628 1395 aa18.66■□□□□ 0.58
TFAP2A-215ENST00000488193 HTATSF1O43719 755 aaKnown RBP18.65■□□□□ 0.58
TFAP2A-215ENST00000488193 CCDC136Q96JN2 1154 aa18.65■□□□□ 0.58
TFAP2A-215ENST00000488193 CHRNA2Q15822 529 aa18.65■□□□□ 0.58
TFAP2A-215ENST00000488193 C8orf58Q8NAV2 365 aa18.65■□□□□ 0.58
TFAP2A-215ENST00000488193 FAM208AQ9UK61 1670 aaKnown RBP18.64■□□□□ 0.57
TFAP2A-215ENST00000488193 IL17REQ8NFR9 667 aa18.64■□□□□ 0.57
TFAP2A-215ENST00000488193 MAP3K5Q99683 1374 aa18.63■□□□□ 0.57
TFAP2A-215ENST00000488193 GNAT3A8MTJ3 354 aa18.63■□□□□ 0.57
TFAP2A-215ENST00000488193 PANK1Q8TE04 598 aa18.63■□□□□ 0.57
TFAP2A-215ENST00000488193 FRAT1Q92837 279 aaPredicted RBP18.63■□□□□ 0.57
TFAP2A-215ENST00000488193 ROBO1Q9Y6N7 1651 aa18.63■□□□□ 0.57
TFAP2A-215ENST00000488193 RLBP1P12271 317 aa18.63■□□□□ 0.57
TFAP2A-215ENST00000488193 SMC4Q9NTJ3 1288 aa18.62■□□□□ 0.57
TFAP2A-215ENST00000488193 ALDH1L2Q3SY69 923 aa18.61■□□□□ 0.57
TFAP2A-215ENST00000488193 RTF1Q92541 710 aaKnown RBP18.61■□□□□ 0.57
TFAP2A-215ENST00000488193 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
TFAP2A-215ENST00000488193 MIS18AQ9NYP9 233 aa18.6■□□□□ 0.57
TFAP2A-215ENST00000488193 ELL2O00472 640 aaPredicted RBP18.6■□□□□ 0.57
TFAP2A-215ENST00000488193 BRPF1P55201 1214 aaPredicted RBP18.6■□□□□ 0.57
TFAP2A-215ENST00000488193 ZNF428Q96B54 188 aa18.6■□□□□ 0.57
TFAP2A-215ENST00000488193 TWISTNBQ3B726 338 aaPredicted RBP18.59■□□□□ 0.57
TFAP2A-215ENST00000488193 AHDC1Q5TGY3 1603 aaPredicted RBP18.59■□□□□ 0.57
TFAP2A-215ENST00000488193 CEMIPQ8WUJ3 1361 aa18.59■□□□□ 0.57
TFAP2A-215ENST00000488193 CANXP27824 592 aaKnown RBP18.58■□□□□ 0.56
TFAP2A-215ENST00000488193 ZKSCAN2Q63HK3 967 aa18.58■□□□□ 0.56
TFAP2A-215ENST00000488193 MRPL50Q8N5N7 158 aaKnown RBP18.58■□□□□ 0.56
TFAP2A-215ENST00000488193 NOB1Q9ULX3 412 aaKnown RBP18.58■□□□□ 0.56
TFAP2A-215ENST00000488193 COG6Q9Y2V7 657 aa18.58■□□□□ 0.56
TFAP2A-215ENST00000488193 TRIM27P14373 513 aa18.56■□□□□ 0.56
TFAP2A-215ENST00000488193 PLEKHO1Q53GL0 409 aaPredicted RBP18.56■□□□□ 0.56
TFAP2A-215ENST00000488193 LGR6Q9HBX8 967 aa18.56■□□□□ 0.56
TFAP2A-215ENST00000488193 NLRP2Q9NX02 1062 aa18.56■□□□□ 0.56
TFAP2A-215ENST00000488193 AMOTQ4VCS5 1084 aa18.56■□□□□ 0.56
TFAP2A-215ENST00000488193 VIRMAQ69YN4 1812 aaKnown RBP18.56■□□□□ 0.56
TFAP2A-215ENST00000488193 MEGF6O75095 1541 aa18.55■□□□□ 0.56
TFAP2A-215ENST00000488193 ZNF530Q6P9A1 599 aaPredicted RBP18.55■□□□□ 0.56
TFAP2A-215ENST00000488193 CLUAP1Q96AJ1 413 aa18.55■□□□□ 0.56
TFAP2A-215ENST00000488193 AKAP4Q5JQC9 854 aa18.54■□□□□ 0.56
TFAP2A-215ENST00000488193 ATF7IPQ6VMQ6 1270 aa18.54■□□□□ 0.56
TFAP2A-215ENST00000488193 PELP1Q8IZL8 1130 aaKnown RBP18.54■□□□□ 0.56
TFAP2A-215ENST00000488193 PRDM11Q9NQV5 511 aa18.54■□□□□ 0.56
TFAP2A-215ENST00000488193 TSPYL4Q9UJ04 414 aa18.54■□□□□ 0.56
TFAP2A-215ENST00000488193 ADAMTS7Q9UKP4 1686 aa18.54■□□□□ 0.56
TFAP2A-215ENST00000488193 TCERG1O14776 1098 aaKnown RBP18.54■□□□□ 0.56
TFAP2A-215ENST00000488193 KIF16BQ96L93 1317 aa18.53■□□□□ 0.56
TFAP2A-215ENST00000488193 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
TFAP2A-215ENST00000488193 DZIP1LQ8IYY4 767 aaKnown RBP18.53■□□□□ 0.56
TFAP2A-215ENST00000488193 COL5A2P05997 1499 aaPredicted RBP18.53■□□□□ 0.56
TFAP2A-215ENST00000488193 KDM2BQ8NHM5 1336 aa18.52■□□□□ 0.56
TFAP2A-215ENST00000488193 COL22A1Q8NFW1 1626 aaPredicted RBP18.52■□□□□ 0.56
TFAP2A-215ENST00000488193 CSB-PGBD3P0DP91 1061 aa18.52■□□□□ 0.55
TFAP2A-215ENST00000488193 BABAM1Q9NWV8 329 aa18.52■□□□□ 0.55
TFAP2A-215ENST00000488193 MVPQ14764 893 aaKnown RBP18.51■□□□□ 0.55
TFAP2A-215ENST00000488193 MPRIPQ6WCQ1 1025 aa18.51■□□□□ 0.55
TFAP2A-215ENST00000488193 WDR17Q8IZU2 1322 aa18.5■□□□□ 0.55
TFAP2A-215ENST00000488193 KDM3BQ7LBC6 1761 aa18.5■□□□□ 0.55
TFAP2A-215ENST00000488193 RNMTO43148 476 aaKnown RBP18.5■□□□□ 0.55
TFAP2A-215ENST00000488193 PKD1L3Q7Z443 1732 aa18.5■□□□□ 0.55
TFAP2A-215ENST00000488193 SIPA1L3O60292 1781 aaPredicted RBP18.49■□□□□ 0.55
TFAP2A-215ENST00000488193 OVOS2A0A0G2JMS6 1433 aa18.49■□□□□ 0.55
TFAP2A-215ENST00000488193 IPO8O15397 1037 aaKnown RBP18.49■□□□□ 0.55
TFAP2A-215ENST00000488193 HAP1P54257 671 aaPredicted RBP18.49■□□□□ 0.55
TFAP2A-215ENST00000488193 RAPGEF4Q8WZA2 1011 aa18.49■□□□□ 0.55
TFAP2A-215ENST00000488193 ARHGAP45Q92619 1136 aa18.49■□□□□ 0.55
TFAP2A-215ENST00000488193 TSHZ2Q9NRE2 1034 aa18.49■□□□□ 0.55
TFAP2A-215ENST00000488193 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.49■□□□□ 0.55
TFAP2A-215ENST00000488193 PLEKHG2Q9H7P9 1386 aa18.49■□□□□ 0.55
TFAP2A-215ENST00000488193 COL16A1Q07092 1604 aaPredicted RBP18.49■□□□□ 0.55
TFAP2A-215ENST00000488193 TATP17735 454 aaPredicted RBP18.48■□□□□ 0.55
TFAP2A-215ENST00000488193 TMEM57Q8N5G2 664 aa18.48■□□□□ 0.55
TFAP2A-215ENST00000488193 MS4A1P11836 297 aa18.48■□□□□ 0.55
TFAP2A-215ENST00000488193 C1orf141Q5JVX7 400 aa18.47■□□□□ 0.55
TFAP2A-215ENST00000488193 FTSJ3Q8IY81 847 aaKnown RBP18.47■□□□□ 0.55
TFAP2A-215ENST00000488193 PHLPP1O60346 1717 aa18.47■□□□□ 0.55
TFAP2A-215ENST00000488193 SCN11AQ9UI33 1791 aa18.46■□□□□ 0.55
TFAP2A-215ENST00000488193 PCDHB15Q9Y5E8 787 aa18.46■□□□□ 0.55
TFAP2A-215ENST00000488193 KDM6AO15550 1401 aaPredicted RBP18.46■□□□□ 0.55
TFAP2A-215ENST00000488193 KCNQ3O43525 872 aa18.46■□□□□ 0.54
TFAP2A-215ENST00000488193 PHKG2P15735 406 aa18.46■□□□□ 0.54
TFAP2A-215ENST00000488193 RGS12O14924 1447 aa18.45■□□□□ 0.54
TFAP2A-215ENST00000488193 CYP27B1O15528 508 aa18.45■□□□□ 0.54
TFAP2A-215ENST00000488193 IGHDP01880 384 aa18.45■□□□□ 0.54
TFAP2A-215ENST00000488193 AAMPQ13685 434 aa18.45■□□□□ 0.54
TFAP2A-215ENST00000488193 LARP1Q6PKG0 1096 aaKnown RBP18.45■□□□□ 0.54
TFAP2A-215ENST00000488193 ABCC4O15439 1325 aa18.45■□□□□ 0.54
TFAP2A-215ENST00000488193 CARD10Q9BWT7 1032 aa18.44■□□□□ 0.54
TFAP2A-215ENST00000488193 SPG7Q9UQ90 795 aa18.44■□□□□ 0.54
TFAP2A-215ENST00000488193 EIF4A1P60842 406 aaKnown RBP18.43■□□□□ 0.54
TFAP2A-215ENST00000488193 TOM1L2Q6ZVM7 507 aa18.43■□□□□ 0.54
TFAP2A-215ENST00000488193 COL14A1Q05707 1796 aaKnown RBP18.43■□□□□ 0.54
TFAP2A-215ENST00000488193 CENPQQ7L2Z9 268 aaPredicted RBP18.43■□□□□ 0.54
TFAP2A-215ENST00000488193 PARP4Q9UKK3 1724 aaKnown RBP18.43■□□□□ 0.54
TFAP2A-215ENST00000488193 TEFQ10587 303 aa18.42■□□□□ 0.54
TFAP2A-215ENST00000488193 SKAP1Q86WV1 359 aa18.42■□□□□ 0.54
TFAP2A-215ENST00000488193 ITPRIPQ8IWB1 547 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms