RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 RAPGEF4Q8WZA2 1011 aa32.27■■■□□ 2.76
RHBDD3-205ENST00000488106 NCAPD2Q15021 1401 aa32.26■■■□□ 2.76
RHBDD3-205ENST00000488106 DDX54Q8TDD1 881 aaKnown RBP32.26■■■□□ 2.75
RHBDD3-205ENST00000488106 EZH2Q15910 746 aaKnown RBP32.25■■■□□ 2.75
RHBDD3-205ENST00000488106 PTF1AQ7RTS3 328 aa32.25■■■□□ 2.75
RHBDD3-205ENST00000488106 EIF4A2Q14240 407 aaKnown RBP32.24■■■□□ 2.75
RHBDD3-205ENST00000488106 TATP17735 454 aaPredicted RBP32.23■■■□□ 2.75
RHBDD3-205ENST00000488106 ZCRB1Q8TBF4 217 aaKnown RBP32.23■■■□□ 2.75
RHBDD3-205ENST00000488106 ACSBG1Q96GR2 724 aa32.22■■■□□ 2.75
RHBDD3-205ENST00000488106 EYA1Q99502 592 aa32.22■■■□□ 2.75
RHBDD3-205ENST00000488106 BCL11BQ9C0K0 894 aaPredicted RBP32.22■■■□□ 2.75
RHBDD3-205ENST00000488106 NPC1L1Q9UHC9 1359 aa32.21■■■□□ 2.75
RHBDD3-205ENST00000488106 CAMKK2Q96RR4 588 aa32.21■■■□□ 2.75
RHBDD3-205ENST00000488106 PARD3Q8TEW0 1356 aa32.2■■■□□ 2.75
RHBDD3-205ENST00000488106 ITGB4P16144 1822 aa32.2■■■□□ 2.75
RHBDD3-205ENST00000488106 TOGARAM1Q9Y4F4 1720 aa32.18■■■□□ 2.74
RHBDD3-205ENST00000488106 KCNQ2O43526 872 aa32.18■■■□□ 2.74
RHBDD3-205ENST00000488106 PCDH11XQ9BZA7 1347 aa32.14■■■□□ 2.74
RHBDD3-205ENST00000488106 PCDH11YQ9BZA8 1340 aa32.14■■■□□ 2.74
RHBDD3-205ENST00000488106 MTHFSP49914 203 aa32.13■■■□□ 2.73
RHBDD3-205ENST00000488106 IGSF1Q8N6C5 1336 aa32.13■■■□□ 2.73
RHBDD3-205ENST00000488106 VIRMAQ69YN4 1812 aaKnown RBP32.11■■■□□ 2.73
RHBDD3-205ENST00000488106 LY75O60449 1722 aa32.09■■■□□ 2.73
RHBDD3-205ENST00000488106 PSDA5PKW4 1024 aaPredicted RBP32.08■■■□□ 2.73
RHBDD3-205ENST00000488106 PLSCR1O15162 318 aa32.08■■■□□ 2.73
RHBDD3-205ENST00000488106 SYTL4Q96C24 671 aaPredicted RBP32.07■■■□□ 2.72
RHBDD3-205ENST00000488106 SRCAPQ6ZRS2 3230 aa32.07■■■□□ 2.72
RHBDD3-205ENST00000488106 ZEB1P37275 1124 aaPredicted RBP32.06■■■□□ 2.72
RHBDD3-205ENST00000488106 COL3A1P02461 1466 aaPredicted RBP32.05■■■□□ 2.72
RHBDD3-205ENST00000488106 SPG7Q9UQ90 795 aa32.05■■■□□ 2.72
RHBDD3-205ENST00000488106 CYP27B1O15528 508 aa32.04■■■□□ 2.72
RHBDD3-205ENST00000488106 IL13P35225 146 aa32.04■■■□□ 2.72
RHBDD3-205ENST00000488106 PRIM1P49642 420 aaKnown RBP32.03■■■□□ 2.72
RHBDD3-205ENST00000488106 AEBP1Q8IUX7 1158 aa32.03■■■□□ 2.72
RHBDD3-205ENST00000488106 R3HDM1Q15032 1099 aaKnown RBP32.02■■■□□ 2.72
RHBDD3-205ENST00000488106 PLEKHG2Q9H7P9 1386 aa31.99■■■□□ 2.71
RHBDD3-205ENST00000488106 TXNRD1Q16881 649 aa31.99■■■□□ 2.71
RHBDD3-205ENST00000488106 SULT6B1Q6IMI4 303 aa31.99■■■□□ 2.71
RHBDD3-205ENST00000488106 PAPPAQ13219 1627 aa31.99■■■□□ 2.71
RHBDD3-205ENST00000488106 PROM2Q8N271 834 aa31.98■■■□□ 2.71
RHBDD3-205ENST00000488106 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.98■■■□□ 2.71
RHBDD3-205ENST00000488106 KDRP35968 1356 aa31.97■■■□□ 2.71
RHBDD3-205ENST00000488106 DIAPH1O60610 1272 aaKnown RBP31.97■■■□□ 2.71
RHBDD3-205ENST00000488106 NBPF14Q5TI25 921 aa31.97■■■□□ 2.71
RHBDD3-205ENST00000488106 SCN11AQ9UI33 1791 aa31.96■■■□□ 2.71
RHBDD3-205ENST00000488106 TUBGCP6Q96RT7 1819 aa31.95■■■□□ 2.7
RHBDD3-205ENST00000488106 LRP5O75197 1615 aa31.94■■■□□ 2.7
RHBDD3-205ENST00000488106 TAF1LQ8IZX4 1826 aa31.94■■■□□ 2.7
RHBDD3-205ENST00000488106 PHKG2P15735 406 aa31.93■■■□□ 2.7
RHBDD3-205ENST00000488106 IFNL2Q8IZJ0 200 aa31.93■■■□□ 2.7
RHBDD3-205ENST00000488106 HMOX1P09601 288 aa31.92■■■□□ 2.7
RHBDD3-205ENST00000488106 PPP2R1AP30153 589 aa31.92■■■□□ 2.7
RHBDD3-205ENST00000488106 DDX10Q13206 875 aaKnown RBP31.92■■■□□ 2.7
RHBDD3-205ENST00000488106 ANO8Q9HCE9 1232 aaPredicted RBP31.92■■■□□ 2.7
RHBDD3-205ENST00000488106 C5P01031 1676 aa31.92■■■□□ 2.7
RHBDD3-205ENST00000488106 CASZ1Q86V15 1759 aa31.91■■■□□ 2.7
RHBDD3-205ENST00000488106 PLEKHO1Q53GL0 409 aaPredicted RBP31.91■■■□□ 2.7
RHBDD3-205ENST00000488106 NKX1-1Q15270 411 aaPredicted RBP31.9■■■□□ 2.7
RHBDD3-205ENST00000488106 MPRIPQ6WCQ1 1025 aa31.9■■■□□ 2.7
RHBDD3-205ENST00000488106 ZNF530Q6P9A1 599 aaPredicted RBP31.89■■■□□ 2.7
RHBDD3-205ENST00000488106 CFAP53Q96M91 514 aa31.89■■■□□ 2.7
RHBDD3-205ENST00000488106 QSER1Q2KHR3 1735 aa31.87■■■□□ 2.69
RHBDD3-205ENST00000488106 U2SURPO15042 1029 aaKnown RBP31.87■■■□□ 2.69
RHBDD3-205ENST00000488106 AMOTQ4VCS5 1084 aa31.87■■■□□ 2.69
RHBDD3-205ENST00000488106 LRRC4BQ9NT99 713 aa31.84■■■□□ 2.69
RHBDD3-205ENST00000488106 KDM6AO15550 1401 aaPredicted RBP31.83■■■□□ 2.69
RHBDD3-205ENST00000488106 C1orf141Q5JVX7 400 aa31.83■■■□□ 2.69
RHBDD3-205ENST00000488106 STK32BQ9NY57 414 aa31.83■■■□□ 2.69
RHBDD3-205ENST00000488106 KCNQ4P56696 695 aa31.82■■■□□ 2.68
RHBDD3-205ENST00000488106 PALLDQ8WX93 1383 aa31.81■■■□□ 2.68
RHBDD3-205ENST00000488106 SLC27A3Q5K4L6 730 aa31.81■■■□□ 2.68
RHBDD3-205ENST00000488106 TMOD3Q9NYL9 352 aa31.81■■■□□ 2.68
RHBDD3-205ENST00000488106 HSP90AB1P08238 724 aaKnown RBP31.8■■■□□ 2.68
RHBDD3-205ENST00000488106 PIGBQ92521 554 aa31.8■■■□□ 2.68
RHBDD3-205ENST00000488106 CCNL1Q9UK58 526 aaPredicted RBP31.79■■■□□ 2.68
RHBDD3-205ENST00000488106 DCAF5Q96JK2 942 aa31.78■■■□□ 2.68
RHBDD3-205ENST00000488106 SLC15A2Q16348 729 aa31.77■■■□□ 2.68
RHBDD3-205ENST00000488106 ADAMTS7Q9UKP4 1686 aa31.76■■■□□ 2.68
RHBDD3-205ENST00000488106 ZNF827Q17R98 1081 aa31.75■■■□□ 2.67
RHBDD3-205ENST00000488106 NUDCQ9Y266 331 aa31.75■■■□□ 2.67
RHBDD3-205ENST00000488106 C4BP0C0L5 1744 aa31.75■■■□□ 2.67
RHBDD3-205ENST00000488106 DLG5Q8TDM6 1919 aa31.73■■■□□ 2.67
RHBDD3-205ENST00000488106 SMARCC1Q92922 1105 aaPredicted RBP31.73■■■□□ 2.67
RHBDD3-205ENST00000488106 ERVV-2B6SEH9 535 aa31.72■■■□□ 2.67
RHBDD3-205ENST00000488106 MTHFSDQ2M296 383 aaKnown RBP31.72■■■□□ 2.67
RHBDD3-205ENST00000488106 AKAP4Q5JQC9 854 aa31.72■■■□□ 2.67
RHBDD3-205ENST00000488106 PDGFDQ9GZP0 370 aaPredicted RBP31.72■■■□□ 2.67
RHBDD3-205ENST00000488106 UBR3Q6ZT12 1888 aa31.72■■■□□ 2.67
RHBDD3-205ENST00000488106 COL5A3P25940 1745 aaPredicted RBP31.7■■■□□ 2.67
RHBDD3-205ENST00000488106 U2AF1L5P0DN76 240 aaPredicted RBP31.7■■■□□ 2.67
RHBDD3-205ENST00000488106 U2AF1Q01081 240 aaKnown RBP eCLIP31.7■■■□□ 2.67
RHBDD3-205ENST00000488106 ASAP1Q9ULH1 1129 aa31.7■■■□□ 2.67
RHBDD3-205ENST00000488106 ZNF831Q5JPB2 1677 aa31.7■■■□□ 2.66
RHBDD3-205ENST00000488106 SIPA1L3O60292 1781 aaPredicted RBP31.69■■■□□ 2.66
RHBDD3-205ENST00000488106 CABP4P57796 275 aa31.69■■■□□ 2.66
RHBDD3-205ENST00000488106 RALBP1Q15311 655 aa31.69■■■□□ 2.66
RHBDD3-205ENST00000488106 MRC1P22897 1456 aa31.68■■■□□ 2.66
RHBDD3-205ENST00000488106 PRKAR2BP31323 418 aa31.68■■■□□ 2.66
RHBDD3-205ENST00000488106 AKT1S1Q96B36 256 aa31.68■■■□□ 2.66
RHBDD3-205ENST00000488106 RSPH6AQ9H0K4 717 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms