RNA–Protein interactions for RNA: ENST00000488061.5

PDE6B-211, Transcript of phosphodiesterase 6B, humanhuman

TSL 5

Gene PDE6B, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-211ENST00000488061 NBPF6Q5VWK0 638 aa24.52■■□□□ 1.52
PDE6B-211ENST00000488061 NBPF4Q96M43 638 aa24.52■■□□□ 1.52
PDE6B-211ENST00000488061 PER1O15534 1290 aaPredicted RBP24.51■■□□□ 1.51
PDE6B-211ENST00000488061 AMER1Q5JTC6 1135 aaPredicted RBP24.51■■□□□ 1.51
PDE6B-211ENST00000488061 PLEKHG2Q9H7P9 1386 aa24.51■■□□□ 1.51
PDE6B-211ENST00000488061 NPC1L1Q9UHC9 1359 aa24.51■■□□□ 1.51
PDE6B-211ENST00000488061 NHSQ6T4R5 1651 aa24.5■■□□□ 1.51
PDE6B-211ENST00000488061 PLSCR1O15162 318 aa24.5■■□□□ 1.51
PDE6B-211ENST00000488061 MORC1Q86VD1 984 aa24.48■■□□□ 1.51
PDE6B-211ENST00000488061 PDGFDQ9GZP0 370 aaPredicted RBP24.48■■□□□ 1.51
PDE6B-211ENST00000488061 SHANK3Q9BYB0 1731 aa24.47■■□□□ 1.51
PDE6B-211ENST00000488061 MEGF6O75095 1541 aa24.47■■□□□ 1.51
PDE6B-211ENST00000488061 PTF1AQ7RTS3 328 aa24.47■■□□□ 1.51
PDE6B-211ENST00000488061 RAPGEF4Q8WZA2 1011 aa24.47■■□□□ 1.51
PDE6B-211ENST00000488061 PPM1GO15355 546 aaPredicted RBP24.45■■□□□ 1.5
PDE6B-211ENST00000488061 ZCRB1Q8TBF4 217 aaKnown RBP24.45■■□□□ 1.5
PDE6B-211ENST00000488061 TATP17735 454 aaPredicted RBP24.43■■□□□ 1.5
PDE6B-211ENST00000488061 PKD1L3Q7Z443 1732 aa24.42■■□□□ 1.5
PDE6B-211ENST00000488061 PTGER2P43116 358 aa24.42■■□□□ 1.5
PDE6B-211ENST00000488061 PROM2Q8N271 834 aa24.42■■□□□ 1.5
PDE6B-211ENST00000488061 ZNF784Q8NCA9 323 aaPredicted RBP24.42■■□□□ 1.5
PDE6B-211ENST00000488061 ZBTB7AO95365 584 aa24.41■■□□□ 1.5
PDE6B-211ENST00000488061 TNNT2P45379 298 aaPredicted RBP24.41■■□□□ 1.5
PDE6B-211ENST00000488061 UTRNP46939 3433 aa24.4■■□□□ 1.5
PDE6B-211ENST00000488061 EYA1Q99502 592 aa24.4■■□□□ 1.5
PDE6B-211ENST00000488061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.4■■□□□ 1.5
PDE6B-211ENST00000488061 EIF4A2Q14240 407 aaKnown RBP24.39■■□□□ 1.49
PDE6B-211ENST00000488061 PCDH11XQ9BZA7 1347 aa24.38■■□□□ 1.49
PDE6B-211ENST00000488061 PCDH11YQ9BZA8 1340 aa24.38■■□□□ 1.49
PDE6B-211ENST00000488061 USHBP1Q8N6Y0 703 aa24.38■■□□□ 1.49
PDE6B-211ENST00000488061 DDX54Q8TDD1 881 aaKnown RBP24.38■■□□□ 1.49
PDE6B-211ENST00000488061 IGSF1Q8N6C5 1336 aa24.37■■□□□ 1.49
PDE6B-211ENST00000488061 BTAF1O14981 1849 aa24.36■■□□□ 1.49
PDE6B-211ENST00000488061 ATF5Q9Y2D1 282 aaPredicted RBP24.36■■□□□ 1.49
PDE6B-211ENST00000488061 DOT1LQ8TEK3 1739 aa24.35■■□□□ 1.49
PDE6B-211ENST00000488061 SPG7Q9UQ90 795 aa24.33■■□□□ 1.49
PDE6B-211ENST00000488061 CHD4Q14839 1912 aa24.33■■□□□ 1.49
PDE6B-211ENST00000488061 SYT17Q9BSW7 474 aa24.32■■□□□ 1.48
PDE6B-211ENST00000488061 FHDC1Q9C0D6 1143 aaPredicted RBP24.32■■□□□ 1.48
PDE6B-211ENST00000488061 TXNRD1Q16881 649 aa24.31■■□□□ 1.48
PDE6B-211ENST00000488061 ACSBG1Q96GR2 724 aa24.31■■□□□ 1.48
PDE6B-211ENST00000488061 NKX1-1Q15270 411 aaPredicted RBP24.3■■□□□ 1.48
PDE6B-211ENST00000488061 CC2D1BQ5T0F9 858 aaKnown RBP24.3■■□□□ 1.48
PDE6B-211ENST00000488061 SGIP1Q9BQI5 828 aa24.3■■□□□ 1.48
PDE6B-211ENST00000488061 STK32BQ9NY57 414 aa24.3■■□□□ 1.48
PDE6B-211ENST00000488061 KAT6BQ8WYB5 2073 aa24.3■■□□□ 1.48
PDE6B-211ENST00000488061 KDRP35968 1356 aa24.29■■□□□ 1.48
PDE6B-211ENST00000488061 MTHFSP49914 203 aa24.29■■□□□ 1.48
PDE6B-211ENST00000488061 SLC15A2Q16348 729 aa24.29■■□□□ 1.48
PDE6B-211ENST00000488061 CYP27B1O15528 508 aa24.28■■□□□ 1.48
PDE6B-211ENST00000488061 IL13P35225 146 aa24.28■■□□□ 1.48
PDE6B-211ENST00000488061 SENP3-EIF4A1A0A087X0R7 540 aa24.27■■□□□ 1.48
PDE6B-211ENST00000488061 LY75O60449 1722 aa24.27■■□□□ 1.48
PDE6B-211ENST00000488061 HMGB2P26583 209 aaKnown RBP24.26■■□□□ 1.47
PDE6B-211ENST00000488061 PRIM1P49642 420 aaKnown RBP24.26■■□□□ 1.47
PDE6B-211ENST00000488061 MTFR1LQ9H019 292 aa24.26■■□□□ 1.47
PDE6B-211ENST00000488061 AMOTQ4VCS5 1084 aa24.25■■□□□ 1.47
PDE6B-211ENST00000488061 SLC27A3Q5K4L6 730 aa24.25■■□□□ 1.47
PDE6B-211ENST00000488061 IFNL2Q8IZJ0 200 aa24.25■■□□□ 1.47
PDE6B-211ENST00000488061 ZEB1P37275 1124 aaPredicted RBP24.24■■□□□ 1.47
PDE6B-211ENST00000488061 C1QTNF8P60827 252 aa24.24■■□□□ 1.47
PDE6B-211ENST00000488061 PAPPAQ13219 1627 aa24.24■■□□□ 1.47
PDE6B-211ENST00000488061 ITGB4P16144 1822 aa24.22■■□□□ 1.47
PDE6B-211ENST00000488061 TOGARAM1Q9Y4F4 1720 aa24.22■■□□□ 1.47
PDE6B-211ENST00000488061 SYTL4Q96C24 671 aaPredicted RBP24.22■■□□□ 1.47
PDE6B-211ENST00000488061 DIAPH1O60610 1272 aaKnown RBP24.21■■□□□ 1.47
PDE6B-211ENST00000488061 PHKG2P15735 406 aa24.21■■□□□ 1.47
PDE6B-211ENST00000488061 PLEKHO1Q53GL0 409 aaPredicted RBP24.21■■□□□ 1.47
PDE6B-211ENST00000488061 COL3A1P02461 1466 aaPredicted RBP24.2■■□□□ 1.47
PDE6B-211ENST00000488061 HSP90AB1P08238 724 aaKnown RBP24.2■■□□□ 1.46
PDE6B-211ENST00000488061 ARXQ96QS3 562 aa24.19■■□□□ 1.46
PDE6B-211ENST00000488061 MAP3K5Q99683 1374 aa24.18■■□□□ 1.46
PDE6B-211ENST00000488061 SULT6B1Q6IMI4 303 aa24.18■■□□□ 1.46
PDE6B-211ENST00000488061 QSER1Q2KHR3 1735 aa24.16■■□□□ 1.46
PDE6B-211ENST00000488061 AEBP1Q8IUX7 1158 aa24.15■■□□□ 1.46
PDE6B-211ENST00000488061 SMARCC1Q92922 1105 aaPredicted RBP24.15■■□□□ 1.46
PDE6B-211ENST00000488061 DCAF5Q96JK2 942 aa24.15■■□□□ 1.46
PDE6B-211ENST00000488061 CFAP53Q96M91 514 aa24.15■■□□□ 1.46
PDE6B-211ENST00000488061 ERVV-2B6SEH9 535 aa24.13■■□□□ 1.45
PDE6B-211ENST00000488061 LRRC4BQ9NT99 713 aa24.13■■□□□ 1.45
PDE6B-211ENST00000488061 ZNF827Q17R98 1081 aa24.12■■□□□ 1.45
PDE6B-211ENST00000488061 MPRIPQ6WCQ1 1025 aa24.12■■□□□ 1.45
PDE6B-211ENST00000488061 PPP2R1AP30153 589 aa24.11■■□□□ 1.45
PDE6B-211ENST00000488061 ZNF530Q6P9A1 599 aaPredicted RBP24.11■■□□□ 1.45
PDE6B-211ENST00000488061 C1orf141Q5JVX7 400 aa24.1■■□□□ 1.45
PDE6B-211ENST00000488061 TMOD3Q9NYL9 352 aa24.1■■□□□ 1.45
PDE6B-211ENST00000488061 PALLDQ8WX93 1383 aa24.1■■□□□ 1.45
PDE6B-211ENST00000488061 PIGBQ92521 554 aa24.09■■□□□ 1.45
PDE6B-211ENST00000488061 AKT1S1Q96B36 256 aa24.09■■□□□ 1.45
PDE6B-211ENST00000488061 CCNL1Q9UK58 526 aaPredicted RBP24.09■■□□□ 1.45
PDE6B-211ENST00000488061 ZNF831Q5JPB2 1677 aa24.08■■□□□ 1.45
PDE6B-211ENST00000488061 GPR162Q16538 588 aa24.08■■□□□ 1.45
PDE6B-211ENST00000488061 NUDCQ9Y266 331 aa24.08■■□□□ 1.45
PDE6B-211ENST00000488061 SCN11AQ9UI33 1791 aa24.08■■□□□ 1.44
PDE6B-211ENST00000488061 C5P01031 1676 aa24.08■■□□□ 1.44
PDE6B-211ENST00000488061 TAF1LQ8IZX4 1826 aa24.07■■□□□ 1.44
PDE6B-211ENST00000488061 AKAP4Q5JQC9 854 aa24.07■■□□□ 1.44
PDE6B-211ENST00000488061 IFFO2Q5TF58 517 aa24.07■■□□□ 1.44
PDE6B-211ENST00000488061 KDM6AO15550 1401 aaPredicted RBP24.07■■□□□ 1.44
PDE6B-211ENST00000488061 CEP350Q5VT06 3117 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms