RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 NSD2O96028 1365 aa17.73■□□□□ 0.43
RPSA-208ENST00000487876 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
RPSA-208ENST00000487876 PARD3Q8TEW0 1356 aa17.72■□□□□ 0.43
RPSA-208ENST00000487876 PSDA5PKW4 1024 aaPredicted RBP17.72■□□□□ 0.43
RPSA-208ENST00000487876 BCL11BQ9C0K0 894 aaPredicted RBP17.72■□□□□ 0.43
RPSA-208ENST00000487876 KCNQ2O43526 872 aa17.71■□□□□ 0.43
RPSA-208ENST00000487876 ACSBG1Q96GR2 724 aa17.71■□□□□ 0.43
RPSA-208ENST00000487876 KNSTRNQ9Y448 316 aa17.71■□□□□ 0.43
RPSA-208ENST00000487876 PKD1L3Q7Z443 1732 aa17.7■□□□□ 0.42
RPSA-208ENST00000487876 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
RPSA-208ENST00000487876 DDX54Q8TDD1 881 aaKnown RBP17.7■□□□□ 0.42
RPSA-208ENST00000487876 NCAPD2Q15021 1401 aa17.7■□□□□ 0.42
RPSA-208ENST00000487876 AMER1Q5JTC6 1135 aaPredicted RBP17.69■□□□□ 0.42
RPSA-208ENST00000487876 MORC1Q86VD1 984 aa17.68■□□□□ 0.42
RPSA-208ENST00000487876 R3HDM1Q15032 1099 aaKnown RBP17.67■□□□□ 0.42
RPSA-208ENST00000487876 ZCRB1Q8TBF4 217 aaKnown RBP17.67■□□□□ 0.42
RPSA-208ENST00000487876 PLSCR1O15162 318 aa17.66■□□□□ 0.42
RPSA-208ENST00000487876 PER1O15534 1290 aaPredicted RBP17.66■□□□□ 0.42
RPSA-208ENST00000487876 EIF4A2Q14240 407 aaKnown RBP17.66■□□□□ 0.42
RPSA-208ENST00000487876 RAPGEF4Q8WZA2 1011 aa17.66■□□□□ 0.42
RPSA-208ENST00000487876 TOGARAM1Q9Y4F4 1720 aa17.66■□□□□ 0.42
RPSA-208ENST00000487876 TATP17735 454 aaPredicted RBP17.65■□□□□ 0.42
RPSA-208ENST00000487876 EYA1Q99502 592 aa17.65■□□□□ 0.42
RPSA-208ENST00000487876 PROM2Q8N271 834 aa17.64■□□□□ 0.41
RPSA-208ENST00000487876 LRP5O75197 1615 aa17.64■□□□□ 0.41
RPSA-208ENST00000487876 CC2D1BQ5T0F9 858 aaKnown RBP17.63■□□□□ 0.41
RPSA-208ENST00000487876 ITGB4P16144 1822 aa17.62■□□□□ 0.41
RPSA-208ENST00000487876 PAPPAQ13219 1627 aa17.61■□□□□ 0.41
RPSA-208ENST00000487876 CNGB1Q14028 1251 aaPredicted RBP17.61■□□□□ 0.41
RPSA-208ENST00000487876 ANO8Q9HCE9 1232 aaPredicted RBP17.61■□□□□ 0.41
RPSA-208ENST00000487876 PRIM1P49642 420 aaKnown RBP17.6■□□□□ 0.41
RPSA-208ENST00000487876 TXNRD1Q16881 649 aa17.6■□□□□ 0.41
RPSA-208ENST00000487876 IGSF1Q8N6C5 1336 aa17.6■□□□□ 0.41
RPSA-208ENST00000487876 PCDH11XQ9BZA7 1347 aa17.6■□□□□ 0.41
RPSA-208ENST00000487876 PCDH11YQ9BZA8 1340 aa17.6■□□□□ 0.41
RPSA-208ENST00000487876 LY75O60449 1722 aa17.6■□□□□ 0.41
RPSA-208ENST00000487876 CYP27B1O15528 508 aa17.59■□□□□ 0.41
RPSA-208ENST00000487876 SYTL4Q96C24 671 aaPredicted RBP17.59■□□□□ 0.41
RPSA-208ENST00000487876 CASZ1Q86V15 1759 aa17.58■□□□□ 0.41
RPSA-208ENST00000487876 NBPF14Q5TI25 921 aa17.58■□□□□ 0.4
RPSA-208ENST00000487876 NPC1L1Q9UHC9 1359 aa17.56■□□□□ 0.4
RPSA-208ENST00000487876 MTHFSP49914 203 aa17.55■□□□□ 0.4
RPSA-208ENST00000487876 AEBP1Q8IUX7 1158 aa17.55■□□□□ 0.4
RPSA-208ENST00000487876 TUBGCP6Q96RT7 1819 aa17.55■□□□□ 0.4
RPSA-208ENST00000487876 IL13P35225 146 aa17.54■□□□□ 0.4
RPSA-208ENST00000487876 LRRC4BQ9NT99 713 aa17.54■□□□□ 0.4
RPSA-208ENST00000487876 SPG7Q9UQ90 795 aa17.54■□□□□ 0.4
RPSA-208ENST00000487876 COL3A1P02461 1466 aaPredicted RBP17.53■□□□□ 0.4
RPSA-208ENST00000487876 KCNQ4P56696 695 aa17.52■□□□□ 0.4
RPSA-208ENST00000487876 PDGFDQ9GZP0 370 aaPredicted RBP17.52■□□□□ 0.4
RPSA-208ENST00000487876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.52■□□□□ 0.4
RPSA-208ENST00000487876 TAF1LQ8IZX4 1826 aa17.51■□□□□ 0.39
RPSA-208ENST00000487876 C5P01031 1676 aa17.51■□□□□ 0.39
RPSA-208ENST00000487876 KDRP35968 1356 aa17.51■□□□□ 0.39
RPSA-208ENST00000487876 VIRMAQ69YN4 1812 aaKnown RBP17.5■□□□□ 0.39
RPSA-208ENST00000487876 PHKG2P15735 406 aa17.5■□□□□ 0.39
RPSA-208ENST00000487876 NKX1-1Q15270 411 aaPredicted RBP17.5■□□□□ 0.39
RPSA-208ENST00000487876 ZNF827Q17R98 1081 aa17.5■□□□□ 0.39
RPSA-208ENST00000487876 SULT6B1Q6IMI4 303 aa17.5■□□□□ 0.39
RPSA-208ENST00000487876 MPRIPQ6WCQ1 1025 aa17.5■□□□□ 0.39
RPSA-208ENST00000487876 STK32BQ9NY57 414 aa17.5■□□□□ 0.39
RPSA-208ENST00000487876 PLEKHG2Q9H7P9 1386 aa17.5■□□□□ 0.39
RPSA-208ENST00000487876 QSER1Q2KHR3 1735 aa17.5■□□□□ 0.39
RPSA-208ENST00000487876 SLC15A2Q16348 729 aa17.49■□□□□ 0.39
RPSA-208ENST00000487876 IFNL2Q8IZJ0 200 aa17.48■□□□□ 0.39
RPSA-208ENST00000487876 SLC27A3Q5K4L6 730 aa17.47■□□□□ 0.39
RPSA-208ENST00000487876 KDM6AO15550 1401 aaPredicted RBP17.47■□□□□ 0.39
RPSA-208ENST00000487876 SCN11AQ9UI33 1791 aa17.46■□□□□ 0.39
RPSA-208ENST00000487876 PALLDQ8WX93 1383 aa17.46■□□□□ 0.39
RPSA-208ENST00000487876 HMOX1P09601 288 aa17.46■□□□□ 0.39
RPSA-208ENST00000487876 ZNF530Q6P9A1 599 aaPredicted RBP17.46■□□□□ 0.39
RPSA-208ENST00000487876 PIGBQ92521 554 aa17.46■□□□□ 0.39
RPSA-208ENST00000487876 CCNL1Q9UK58 526 aaPredicted RBP17.46■□□□□ 0.39
RPSA-208ENST00000487876 DIAPH1O60610 1272 aaKnown RBP17.45■□□□□ 0.38
RPSA-208ENST00000487876 PLEKHO1Q53GL0 409 aaPredicted RBP17.45■□□□□ 0.38
RPSA-208ENST00000487876 ZBTB7AO95365 584 aa17.44■□□□□ 0.38
RPSA-208ENST00000487876 AKT1S1Q96B36 256 aa17.44■□□□□ 0.38
RPSA-208ENST00000487876 TMOD3Q9NYL9 352 aa17.43■□□□□ 0.38
RPSA-208ENST00000487876 C4BP0C0L5 1744 aa17.42■□□□□ 0.38
RPSA-208ENST00000487876 PPP2R1AP30153 589 aa17.42■□□□□ 0.38
RPSA-208ENST00000487876 AMOTQ4VCS5 1084 aa17.42■□□□□ 0.38
RPSA-208ENST00000487876 SPON1Q9HCB6 807 aa17.42■□□□□ 0.38
RPSA-208ENST00000487876 ASAP1Q9ULH1 1129 aa17.41■□□□□ 0.38
RPSA-208ENST00000487876 U2SURPO15042 1029 aaKnown RBP17.4■□□□□ 0.38
RPSA-208ENST00000487876 C1orf141Q5JVX7 400 aa17.4■□□□□ 0.38
RPSA-208ENST00000487876 DCAF5Q96JK2 942 aa17.4■□□□□ 0.38
RPSA-208ENST00000487876 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
RPSA-208ENST00000487876 PNPLA7Q6ZV29 1317 aa17.4■□□□□ 0.38
RPSA-208ENST00000487876 UBR3Q6ZT12 1888 aa17.39■□□□□ 0.38
RPSA-208ENST00000487876 ADAMTS7Q9UKP4 1686 aa17.39■□□□□ 0.37
RPSA-208ENST00000487876 HSP90AB1P08238 724 aaKnown RBP17.39■□□□□ 0.37
RPSA-208ENST00000487876 SMARCC1Q92922 1105 aaPredicted RBP17.39■□□□□ 0.37
RPSA-208ENST00000487876 COL24A1Q17RW2 1714 aa17.38■□□□□ 0.37
RPSA-208ENST00000487876 ERVV-2B6SEH9 535 aa17.38■□□□□ 0.37
RPSA-208ENST00000487876 PTGER2P43116 358 aa17.38■□□□□ 0.37
RPSA-208ENST00000487876 TFCP2L1Q9NZI6 479 aa17.38■□□□□ 0.37
RPSA-208ENST00000487876 ATG3Q9NT62 314 aa17.37■□□□□ 0.37
RPSA-208ENST00000487876 COL5A3P25940 1745 aaPredicted RBP17.37■□□□□ 0.37
RPSA-208ENST00000487876 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
RPSA-208ENST00000487876 LOC102724428A0A0B4J2F2 783 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms