RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 NANOS1Q8WY41 292 aaKnown RBP9.34□□□□□ -0.91
CCDC66-221ENST00000487739 ESF1Q9H501 851 aaKnown RBP9.34□□□□□ -0.91
CCDC66-221ENST00000487739 ITGA6P23229 1130 aa9.33□□□□□ -0.92
CCDC66-221ENST00000487739 RNF144AP50876 292 aaPredicted RBP9.33□□□□□ -0.92
CCDC66-221ENST00000487739 MEN1O00255 615 aa9.32□□□□□ -0.92
CCDC66-221ENST00000487739 GPC1P35052 558 aa9.32□□□□□ -0.92
CCDC66-221ENST00000487739 SCTRP47872 440 aa9.32□□□□□ -0.92
CCDC66-221ENST00000487739 EIF4G2P78344 907 aaKnown RBP eCLIP9.32□□□□□ -0.92
CCDC66-221ENST00000487739 SENP3-EIF4A1A0A087X0R7 540 aa9.31□□□□□ -0.92
CCDC66-221ENST00000487739 A0A1W2PRU2 124 aa9.31□□□□□ -0.92
CCDC66-221ENST00000487739 CEP126Q9P2H0 1117 aa9.31□□□□□ -0.92
CCDC66-221ENST00000487739 CDC14CA4D256 554 aa9.3□□□□□ -0.92
CCDC66-221ENST00000487739 IRF5Q13568 498 aa9.3□□□□□ -0.92
CCDC66-221ENST00000487739 PRICKLE2Q7Z3G6 844 aa9.3□□□□□ -0.92
CCDC66-221ENST00000487739 GPR161Q8N6U8 529 aaKnown RBP9.3□□□□□ -0.92
CCDC66-221ENST00000487739 NLRP3Q96P20 1036 aa9.3□□□□□ -0.92
CCDC66-221ENST00000487739 TRAK2O60296 914 aa9.29□□□□□ -0.92
CCDC66-221ENST00000487739 SV2AQ7L0J3 742 aa9.29□□□□□ -0.92
CCDC66-221ENST00000487739 OSBPL3Q9H4L5 887 aa9.29□□□□□ -0.92
CCDC66-221ENST00000487739 MYCP01106 439 aaPredicted RBP9.28□□□□□ -0.92
CCDC66-221ENST00000487739 CLN3Q13286 438 aa9.28□□□□□ -0.92
CCDC66-221ENST00000487739 VWA5B2Q8N398 1253 aa9.28□□□□□ -0.92
CCDC66-221ENST00000487739 CNTNAP3BQ96NU0 1288 aa9.28□□□□□ -0.92
CCDC66-221ENST00000487739 COL25A1Q9BXS0 654 aaPredicted RBP9.28□□□□□ -0.92
CCDC66-221ENST00000487739 CNTNAP3Q9BZ76 1288 aa9.28□□□□□ -0.92
CCDC66-221ENST00000487739 GDPD2Q9HCC8 539 aa9.28□□□□□ -0.92
CCDC66-221ENST00000487739 ARHGEF10LQ9HCE6 1279 aa9.28□□□□□ -0.92
CCDC66-221ENST00000487739 RHOQP17081 205 aa9.27□□□□□ -0.93
CCDC66-221ENST00000487739 ABL2P42684 1182 aa9.27□□□□□ -0.93
CCDC66-221ENST00000487739 KRT76Q01546 638 aa9.27□□□□□ -0.93
CCDC66-221ENST00000487739 MCM6Q14566 821 aa9.27□□□□□ -0.93
CCDC66-221ENST00000487739 SLC27A3Q5K4L6 730 aa9.27□□□□□ -0.93
CCDC66-221ENST00000487739 CCDC85AQ96PX6 553 aaPredicted RBP9.27□□□□□ -0.93
CCDC66-221ENST00000487739 VAC14Q08AM6 782 aa9.26□□□□□ -0.93
CCDC66-221ENST00000487739 GNRH1P01148 92 aa9.25□□□□□ -0.93
CCDC66-221ENST00000487739 WASHC4Q2M389 1173 aa9.25□□□□□ -0.93
CCDC66-221ENST00000487739 SLFNL1Q499Z3 407 aa9.25□□□□□ -0.93
CCDC66-221ENST00000487739 DOLKQ9UPQ8 538 aa9.25□□□□□ -0.93
CCDC66-221ENST00000487739 RNF135Q8IUD6 432 aa9.24□□□□□ -0.93
CCDC66-221ENST00000487739 CDCA7Q9BWT1 371 aaPredicted RBP9.24□□□□□ -0.93
CCDC66-221ENST00000487739 GRIP2Q9C0E4 1043 aa9.24□□□□□ -0.93
CCDC66-221ENST00000487739 RNFT1Q5M7Z0 435 aa9.23□□□□□ -0.93
CCDC66-221ENST00000487739 PHTF2Q8N3S3 785 aa9.23□□□□□ -0.93
CCDC66-221ENST00000487739 RAB6BQ9NRW1 208 aa9.23□□□□□ -0.93
CCDC66-221ENST00000487739 POU4F2Q12837 409 aa9.22□□□□□ -0.93
CCDC66-221ENST00000487739 GMCL1Q96IK5 515 aa9.22□□□□□ -0.93
CCDC66-221ENST00000487739 ESYT1Q9BSJ8 1104 aa9.22□□□□□ -0.93
CCDC66-221ENST00000487739 DYRK1BQ9Y463 629 aa9.22□□□□□ -0.93
CCDC66-221ENST00000487739 SPATA31C2B4DYI2 1134 aa9.21□□□□□ -0.94
CCDC66-221ENST00000487739 SOX11P35716 441 aa9.21□□□□□ -0.94
CCDC66-221ENST00000487739 USP4Q13107 963 aa9.21□□□□□ -0.94
CCDC66-221ENST00000487739 WDR44Q5JSH3 913 aa9.21□□□□□ -0.94
CCDC66-221ENST00000487739 NBPF10Q6P3W6 841 aaKnown RBP9.21□□□□□ -0.94
CCDC66-221ENST00000487739 NBPF15Q8N660 670 aa9.21□□□□□ -0.94
CCDC66-221ENST00000487739 CNKSR1Q969H4 720 aa9.21□□□□□ -0.94
CCDC66-221ENST00000487739 CUEDC1Q9NWM3 386 aaPredicted RBP9.21□□□□□ -0.94
CCDC66-221ENST00000487739 WASLO00401 505 aaPredicted RBP9.2□□□□□ -0.94
CCDC66-221ENST00000487739 IL2RAP01589 272 aa9.2□□□□□ -0.94
CCDC66-221ENST00000487739 SEMA3FQ13275 785 aa9.2□□□□□ -0.94
CCDC66-221ENST00000487739 ESCO1Q5FWF5 840 aa9.2□□□□□ -0.94
CCDC66-221ENST00000487739 RIPOR1Q6ZS17 1223 aa9.2□□□□□ -0.94
CCDC66-221ENST00000487739 TAS1R3Q7RTX0 852 aa9.2□□□□□ -0.94
CCDC66-221ENST00000487739 TRIM22Q8IYM9 498 aa9.2□□□□□ -0.94
CCDC66-221ENST00000487739 SIRT1Q96EB6 747 aa9.2□□□□□ -0.94
CCDC66-221ENST00000487739 ZNF837Q96EG3 531 aaPredicted RBP9.2□□□□□ -0.94
CCDC66-221ENST00000487739 H7C1W4 665 aa9.19□□□□□ -0.94
CCDC66-221ENST00000487739 TSGA10IPQ3SY00 556 aa9.19□□□□□ -0.94
CCDC66-221ENST00000487739 OXLD1Q5BKU9 147 aa9.19□□□□□ -0.94
CCDC66-221ENST00000487739 CHIC2Q9UKJ5 165 aa9.19□□□□□ -0.94
CCDC66-221ENST00000487739 COG6Q9Y2V7 657 aa9.19□□□□□ -0.94
CCDC66-221ENST00000487739 SLURP2P0DP57 97 aa9.18□□□□□ -0.94
CCDC66-221ENST00000487739 GTF2E1P29083 439 aaPredicted RBP9.18□□□□□ -0.94
CCDC66-221ENST00000487739 CENPCQ03188 943 aa9.18□□□□□ -0.94
CCDC66-221ENST00000487739 FOXR1Q6PIV2 292 aa9.18□□□□□ -0.94
CCDC66-221ENST00000487739 GAS2L1Q99501 681 aaPredicted RBP9.18□□□□□ -0.94
CCDC66-221ENST00000487739 TIMMDC1Q9NPL8 285 aa9.18□□□□□ -0.94
CCDC66-221ENST00000487739 MAP7D1Q3KQU3 841 aa9.17□□□□□ -0.94
CCDC66-221ENST00000487739 WWC1Q8IX03 1113 aa9.17□□□□□ -0.94
CCDC66-221ENST00000487739 SVOPQ8N4V2 548 aa9.17□□□□□ -0.94
CCDC66-221ENST00000487739 XAGE2Q96GT9 111 aa9.17□□□□□ -0.94
CCDC66-221ENST00000487739 ZSCAN10Q96SZ4 725 aaPredicted RBP9.17□□□□□ -0.94
CCDC66-221ENST00000487739 HRH3Q9Y5N1 445 aa9.17□□□□□ -0.94
CCDC66-221ENST00000487739 ZNF385CQ66K41 422 aaPredicted RBP9.16□□□□□ -0.94
CCDC66-221ENST00000487739 SRSF11Q05519 484 aaKnown RBP9.15□□□□□ -0.94
CCDC66-221ENST00000487739 GAS6Q14393 721 aa9.15□□□□□ -0.94
CCDC66-221ENST00000487739 DBN1Q16643 649 aa9.15□□□□□ -0.94
CCDC66-221ENST00000487739 GNASQ5JWF2 1037 aa9.15□□□□□ -0.94
CCDC66-221ENST00000487739 PLPP7Q8NBV4 271 aa9.15□□□□□ -0.94
CCDC66-221ENST00000487739 FHDC1Q9C0D6 1143 aaPredicted RBP9.15□□□□□ -0.94
CCDC66-221ENST00000487739 ADAMTS2O95450 1211 aa9.14□□□□□ -0.95
CCDC66-221ENST00000487739 F11P03951 625 aa9.14□□□□□ -0.95
CCDC66-221ENST00000487739 TMEM214Q6NUQ4 689 aaKnown RBP9.14□□□□□ -0.95
CCDC66-221ENST00000487739 TRERF1Q96PN7 1200 aa9.14□□□□□ -0.95
CCDC66-221ENST00000487739 ETNK1Q9HBU6 452 aa9.14□□□□□ -0.95
CCDC66-221ENST00000487739 GPR25O00155 361 aa9.13□□□□□ -0.95
CCDC66-221ENST00000487739 RAD21O60216 631 aa9.13□□□□□ -0.95
CCDC66-221ENST00000487739 FLIIQ13045 1269 aa9.13□□□□□ -0.95
CCDC66-221ENST00000487739 GTPBP3Q969Y2 492 aaKnown RBP9.13□□□□□ -0.95
CCDC66-221ENST00000487739 NUCKS1Q9H1E3 243 aaKnown RBP9.13□□□□□ -0.95
CCDC66-221ENST00000487739 MBIPQ9NS73 344 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms