RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 TXNRD1Q16881 649 aa16.56■□□□□ 0.24
SFXN3-206ENST00000487721 PDGFDQ9GZP0 370 aaPredicted RBP16.56■□□□□ 0.24
SFXN3-206ENST00000487721 TATP17735 454 aaPredicted RBP16.55■□□□□ 0.24
SFXN3-206ENST00000487721 YY1P25490 414 aa16.55■□□□□ 0.24
SFXN3-206ENST00000487721 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
SFXN3-206ENST00000487721 USHBP1Q8N6Y0 703 aa16.54■□□□□ 0.24
SFXN3-206ENST00000487721 ZCRB1Q8TBF4 217 aaKnown RBP16.54■□□□□ 0.24
SFXN3-206ENST00000487721 LRRC37A3O60309 1634 aa16.54■□□□□ 0.24
SFXN3-206ENST00000487721 TNS2Q63HR2 1409 aa16.53■□□□□ 0.24
SFXN3-206ENST00000487721 NPC1L1Q9UHC9 1359 aa16.53■□□□□ 0.24
SFXN3-206ENST00000487721 ZBTB7AO95365 584 aa16.53■□□□□ 0.24
SFXN3-206ENST00000487721 CNGB1Q14028 1251 aaPredicted RBP16.53■□□□□ 0.24
SFXN3-206ENST00000487721 POTEDQ86YR6 584 aa16.53■□□□□ 0.24
SFXN3-206ENST00000487721 DDX54Q8TDD1 881 aaKnown RBP16.53■□□□□ 0.24
SFXN3-206ENST00000487721 STK32BQ9NY57 414 aa16.53■□□□□ 0.24
SFXN3-206ENST00000487721 ANKRD26Q9UPS8 1709 aa16.53■□□□□ 0.24
SFXN3-206ENST00000487721 SLC15A2Q16348 729 aa16.52■□□□□ 0.24
SFXN3-206ENST00000487721 EIF4A2Q14240 407 aaKnown RBP16.51■□□□□ 0.23
SFXN3-206ENST00000487721 ACSBG1Q96GR2 724 aa16.51■□□□□ 0.23
SFXN3-206ENST00000487721 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
SFXN3-206ENST00000487721 RGPD5Q99666 1765 aa16.51■□□□□ 0.23
SFXN3-206ENST00000487721 SBF2Q86WG5 1849 aa16.5■□□□□ 0.23
SFXN3-206ENST00000487721 EYA1Q99502 592 aa16.5■□□□□ 0.23
SFXN3-206ENST00000487721 PTGER2P43116 358 aa16.49■□□□□ 0.23
SFXN3-206ENST00000487721 MTHFSP49914 203 aa16.49■□□□□ 0.23
SFXN3-206ENST00000487721 FAM208AQ9UK61 1670 aaKnown RBP16.49■□□□□ 0.23
SFXN3-206ENST00000487721 SPG7Q9UQ90 795 aa16.48■□□□□ 0.23
SFXN3-206ENST00000487721 RGPD3A6NKT7 1758 aaPredicted RBP16.47■□□□□ 0.23
SFXN3-206ENST00000487721 RGPD4Q7Z3J3 1758 aa16.47■□□□□ 0.23
SFXN3-206ENST00000487721 ADRA2BP18089 450 aa16.47■□□□□ 0.23
SFXN3-206ENST00000487721 PCDH11XQ9BZA7 1347 aa16.46■□□□□ 0.23
SFXN3-206ENST00000487721 PCDH11YQ9BZA8 1340 aa16.46■□□□□ 0.23
SFXN3-206ENST00000487721 CFAP53Q96M91 514 aa16.45■□□□□ 0.22
SFXN3-206ENST00000487721 MTFR1LQ9H019 292 aa16.45■□□□□ 0.22
SFXN3-206ENST00000487721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.45■□□□□ 0.22
SFXN3-206ENST00000487721 MEGF6O75095 1541 aa16.45■□□□□ 0.22
SFXN3-206ENST00000487721 DIAPH1O60610 1272 aaKnown RBP16.44■□□□□ 0.22
SFXN3-206ENST00000487721 SYT17Q9BSW7 474 aa16.44■□□□□ 0.22
SFXN3-206ENST00000487721 IGSF1Q8N6C5 1336 aa16.44■□□□□ 0.22
SFXN3-206ENST00000487721 WNK3Q9BYP7 1800 aa16.43■□□□□ 0.22
SFXN3-206ENST00000487721 IL13P35225 146 aa16.43■□□□□ 0.22
SFXN3-206ENST00000487721 SYTL4Q96C24 671 aaPredicted RBP16.43■□□□□ 0.22
SFXN3-206ENST00000487721 FHDC1Q9C0D6 1143 aaPredicted RBP16.43■□□□□ 0.22
SFXN3-206ENST00000487721 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
SFXN3-206ENST00000487721 DDX10Q13206 875 aaKnown RBP16.42■□□□□ 0.22
SFXN3-206ENST00000487721 PLEKHO1Q53GL0 409 aaPredicted RBP16.42■□□□□ 0.22
SFXN3-206ENST00000487721 SGIP1Q9BQI5 828 aa16.42■□□□□ 0.22
SFXN3-206ENST00000487721 LRRC4BQ9NT99 713 aa16.42■□□□□ 0.22
SFXN3-206ENST00000487721 CASZ1Q86V15 1759 aa16.41■□□□□ 0.22
SFXN3-206ENST00000487721 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
SFXN3-206ENST00000487721 AMOTQ4VCS5 1084 aa16.41■□□□□ 0.22
SFXN3-206ENST00000487721 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
SFXN3-206ENST00000487721 NCAPD2Q15021 1401 aa16.41■□□□□ 0.22
SFXN3-206ENST00000487721 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
SFXN3-206ENST00000487721 PRIM1P49642 420 aaKnown RBP16.4■□□□□ 0.22
SFXN3-206ENST00000487721 IFNL2Q8IZJ0 200 aa16.4■□□□□ 0.22
SFXN3-206ENST00000487721 ZNF827Q17R98 1081 aa16.39■□□□□ 0.21
SFXN3-206ENST00000487721 ARXQ96QS3 562 aa16.39■□□□□ 0.21
SFXN3-206ENST00000487721 NUDCQ9Y266 331 aa16.39■□□□□ 0.21
SFXN3-206ENST00000487721 U2SURPO15042 1029 aaKnown RBP16.38■□□□□ 0.21
SFXN3-206ENST00000487721 CYP27B1O15528 508 aa16.38■□□□□ 0.21
SFXN3-206ENST00000487721 HSP90AB1P08238 724 aaKnown RBP16.38■□□□□ 0.21
SFXN3-206ENST00000487721 PPP2R1AP30153 589 aa16.38■□□□□ 0.21
SFXN3-206ENST00000487721 SLC27A3Q5K4L6 730 aa16.38■□□□□ 0.21
SFXN3-206ENST00000487721 AKT1S1Q96B36 256 aa16.37■□□□□ 0.21
SFXN3-206ENST00000487721 PHKG2P15735 406 aa16.36■□□□□ 0.21
SFXN3-206ENST00000487721 HMGB2P26583 209 aaKnown RBP16.36■□□□□ 0.21
SFXN3-206ENST00000487721 NKX1-1Q15270 411 aaPredicted RBP16.36■□□□□ 0.21
SFXN3-206ENST00000487721 RALBP1Q15311 655 aa16.36■□□□□ 0.21
SFXN3-206ENST00000487721 C1orf141Q5JVX7 400 aa16.36■□□□□ 0.21
SFXN3-206ENST00000487721 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
SFXN3-206ENST00000487721 NHSQ6T4R5 1651 aa16.36■□□□□ 0.21
SFXN3-206ENST00000487721 KCNQ4P56696 695 aa16.35■□□□□ 0.21
SFXN3-206ENST00000487721 ZNF530Q6P9A1 599 aaPredicted RBP16.35■□□□□ 0.21
SFXN3-206ENST00000487721 SLC16A10Q8TF71 515 aa16.35■□□□□ 0.21
SFXN3-206ENST00000487721 HMOX1P09601 288 aa16.34■□□□□ 0.21
SFXN3-206ENST00000487721 MPRIPQ6WCQ1 1025 aa16.34■□□□□ 0.21
SFXN3-206ENST00000487721 KDRP35968 1356 aa16.34■□□□□ 0.21
SFXN3-206ENST00000487721 ZNF784Q8NCA9 323 aaPredicted RBP16.33■□□□□ 0.2
SFXN3-206ENST00000487721 DCAF5Q96JK2 942 aa16.33■□□□□ 0.2
SFXN3-206ENST00000487721 TFCP2L1Q9NZI6 479 aa16.33■□□□□ 0.2
SFXN3-206ENST00000487721 RGPD2P0DJD1 1756 aa16.33■□□□□ 0.2
SFXN3-206ENST00000487721 KAT6BQ8WYB5 2073 aa16.32■□□□□ 0.2
SFXN3-206ENST00000487721 SMARCC1Q92922 1105 aaPredicted RBP16.32■□□□□ 0.2
SFXN3-206ENST00000487721 TMOD3Q9NYL9 352 aa16.32■□□□□ 0.2
SFXN3-206ENST00000487721 PNPLA7Q6ZV29 1317 aa16.31■□□□□ 0.2
SFXN3-206ENST00000487721 BTAF1O14981 1849 aa16.31■□□□□ 0.2
SFXN3-206ENST00000487721 ERVV-2B6SEH9 535 aa16.3■□□□□ 0.2
SFXN3-206ENST00000487721 U2AF1L5P0DN76 240 aaPredicted RBP16.3■□□□□ 0.2
SFXN3-206ENST00000487721 POLD1P28340 1107 aa16.3■□□□□ 0.2
SFXN3-206ENST00000487721 U2AF1Q01081 240 aaKnown RBP eCLIP16.3■□□□□ 0.2
SFXN3-206ENST00000487721 GPR162Q16538 588 aa16.3■□□□□ 0.2
SFXN3-206ENST00000487721 MAP3K5Q99683 1374 aa16.29■□□□□ 0.2
SFXN3-206ENST00000487721 AKAP4Q5JQC9 854 aa16.29■□□□□ 0.2
SFXN3-206ENST00000487721 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
SFXN3-206ENST00000487721 PAPPAQ13219 1627 aa16.29■□□□□ 0.2
SFXN3-206ENST00000487721 NEFMP07197 916 aa16.28■□□□□ 0.2
SFXN3-206ENST00000487721 CABP4P57796 275 aa16.28■□□□□ 0.2
SFXN3-206ENST00000487721 PIGBQ92521 554 aa16.28■□□□□ 0.2
SFXN3-206ENST00000487721 CCNL1Q9UK58 526 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms