RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 PCDH11XQ9BZA7 1347 aa12.64□□□□□ -0.39
LCN2-205ENST00000487719 PCDH11YQ9BZA8 1340 aa12.64□□□□□ -0.39
LCN2-205ENST00000487719 MEGF6O75095 1541 aa12.64□□□□□ -0.39
LCN2-205ENST00000487719 MARCH10Q8NA82 808 aaPredicted RBP12.64□□□□□ -0.39
LCN2-205ENST00000487719 DDX54Q8TDD1 881 aaKnown RBP12.64□□□□□ -0.39
LCN2-205ENST00000487719 RREB1Q92766 1687 aa12.64□□□□□ -0.39
LCN2-205ENST00000487719 VIRMAQ69YN4 1812 aaKnown RBP12.63□□□□□ -0.39
LCN2-205ENST00000487719 EIF4A2Q14240 407 aaKnown RBP12.63□□□□□ -0.39
LCN2-205ENST00000487719 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
LCN2-205ENST00000487719 CFAP53Q96M91 514 aa12.63□□□□□ -0.39
LCN2-205ENST00000487719 BCL11BQ9C0K0 894 aaPredicted RBP12.63□□□□□ -0.39
LCN2-205ENST00000487719 SPG7Q9UQ90 795 aa12.63□□□□□ -0.39
LCN2-205ENST00000487719 PLEKHG2Q9H7P9 1386 aa12.63□□□□□ -0.39
LCN2-205ENST00000487719 ITGB4P16144 1822 aa12.62□□□□□ -0.39
LCN2-205ENST00000487719 MTHFSP49914 203 aa12.62□□□□□ -0.39
LCN2-205ENST00000487719 EYA1Q99502 592 aa12.62□□□□□ -0.39
LCN2-205ENST00000487719 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
LCN2-205ENST00000487719 EN1Q05925 392 aaPredicted RBP12.61□□□□□ -0.39
LCN2-205ENST00000487719 NUP188Q5SRE5 1749 aa12.61□□□□□ -0.39
LCN2-205ENST00000487719 IGSF1Q8N6C5 1336 aa12.6□□□□□ -0.39
LCN2-205ENST00000487719 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
LCN2-205ENST00000487719 NBPF14Q5TI25 921 aa12.59□□□□□ -0.39
LCN2-205ENST00000487719 SYTL4Q96C24 671 aaPredicted RBP12.59□□□□□ -0.39
LCN2-205ENST00000487719 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.59□□□□□ -0.39
LCN2-205ENST00000487719 PLSCR1O15162 318 aa12.58□□□□□ -0.4
LCN2-205ENST00000487719 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.4
LCN2-205ENST00000487719 AMOTQ4VCS5 1084 aa12.58□□□□□ -0.4
LCN2-205ENST00000487719 ACSBG1Q96GR2 724 aa12.58□□□□□ -0.4
LCN2-205ENST00000487719 NUDCQ9Y266 331 aa12.58□□□□□ -0.4
LCN2-205ENST00000487719 EZH2Q15910 746 aaKnown RBP12.57□□□□□ -0.4
LCN2-205ENST00000487719 PLEKHO1Q53GL0 409 aaPredicted RBP12.57□□□□□ -0.4
LCN2-205ENST00000487719 HSP90AB1P08238 724 aaKnown RBP12.56□□□□□ -0.4
LCN2-205ENST00000487719 DDX10Q13206 875 aaKnown RBP12.56□□□□□ -0.4
LCN2-205ENST00000487719 C1orf141Q5JVX7 400 aa12.56□□□□□ -0.4
LCN2-205ENST00000487719 SULT6B1Q6IMI4 303 aa12.56□□□□□ -0.4
LCN2-205ENST00000487719 IFNL2Q8IZJ0 200 aa12.56□□□□□ -0.4
LCN2-205ENST00000487719 CAMKK2Q96RR4 588 aa12.56□□□□□ -0.4
LCN2-205ENST00000487719 LY75O60449 1722 aa12.56□□□□□ -0.4
LCN2-205ENST00000487719 U2SURPO15042 1029 aaKnown RBP12.55□□□□□ -0.4
LCN2-205ENST00000487719 IL13P35225 146 aa12.55□□□□□ -0.4
LCN2-205ENST00000487719 SCN11AQ9UI33 1791 aa12.55□□□□□ -0.4
LCN2-205ENST00000487719 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
LCN2-205ENST00000487719 KCNQ2O43526 872 aa12.54□□□□□ -0.4
LCN2-205ENST00000487719 KDRP35968 1356 aa12.54□□□□□ -0.4
LCN2-205ENST00000487719 NEFMP07197 916 aa12.53□□□□□ -0.4
LCN2-205ENST00000487719 PPP2R1AP30153 589 aa12.53□□□□□ -0.4
LCN2-205ENST00000487719 PRIM1P49642 420 aaKnown RBP12.53□□□□□ -0.4
LCN2-205ENST00000487719 RALBP1Q15311 655 aa12.53□□□□□ -0.4
LCN2-205ENST00000487719 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
LCN2-205ENST00000487719 CYP27B1O15528 508 aa12.52□□□□□ -0.41
LCN2-205ENST00000487719 COL3A1P02461 1466 aaPredicted RBP12.52□□□□□ -0.41
LCN2-205ENST00000487719 TAF1LQ8IZX4 1826 aa12.51□□□□□ -0.41
LCN2-205ENST00000487719 HMOX1P09601 288 aa12.51□□□□□ -0.41
LCN2-205ENST00000487719 PHKG2P15735 406 aa12.51□□□□□ -0.41
LCN2-205ENST00000487719 TXNRD1Q16881 649 aa12.51□□□□□ -0.41
LCN2-205ENST00000487719 SLC27A3Q5K4L6 730 aa12.51□□□□□ -0.41
LCN2-205ENST00000487719 MPRIPQ6WCQ1 1025 aa12.51□□□□□ -0.41
LCN2-205ENST00000487719 AEBP1Q8IUX7 1158 aa12.51□□□□□ -0.41
LCN2-205ENST00000487719 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
LCN2-205ENST00000487719 TMOD3Q9NYL9 352 aa12.51□□□□□ -0.41
LCN2-205ENST00000487719 C5P01031 1676 aa12.51□□□□□ -0.41
LCN2-205ENST00000487719 NKX1-1Q15270 411 aaPredicted RBP12.5□□□□□ -0.41
LCN2-205ENST00000487719 DCAF5Q96JK2 942 aa12.5□□□□□ -0.41
LCN2-205ENST00000487719 STK32BQ9NY57 414 aa12.5□□□□□ -0.41
LCN2-205ENST00000487719 QSER1Q2KHR3 1735 aa12.5□□□□□ -0.41
LCN2-205ENST00000487719 PSDA5PKW4 1024 aaPredicted RBP12.49□□□□□ -0.41
LCN2-205ENST00000487719 U2AF1L5P0DN76 240 aaPredicted RBP12.49□□□□□ -0.41
LCN2-205ENST00000487719 U2AF1Q01081 240 aaKnown RBP eCLIP12.49□□□□□ -0.41
LCN2-205ENST00000487719 R3HDM1Q15032 1099 aaKnown RBP12.49□□□□□ -0.41
LCN2-205ENST00000487719 PTF1AQ7RTS3 328 aa12.49□□□□□ -0.41
LCN2-205ENST00000487719 PNNQ9H307 717 aaKnown RBP12.49□□□□□ -0.41
LCN2-205ENST00000487719 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
LCN2-205ENST00000487719 ERVV-2B6SEH9 535 aa12.48□□□□□ -0.41
LCN2-205ENST00000487719 AKAP4Q5JQC9 854 aa12.48□□□□□ -0.41
LCN2-205ENST00000487719 GAS2L2Q8NHY3 880 aa12.48□□□□□ -0.41
LCN2-205ENST00000487719 DLG5Q8TDM6 1919 aa12.48□□□□□ -0.41
LCN2-205ENST00000487719 MYBBP1AQ9BQG0 1328 aaKnown RBP12.47□□□□□ -0.41
LCN2-205ENST00000487719 CABP4P57796 275 aa12.47□□□□□ -0.41
LCN2-205ENST00000487719 CCNL1Q9UK58 526 aaPredicted RBP12.47□□□□□ -0.41
LCN2-205ENST00000487719 LRP5O75197 1615 aa12.47□□□□□ -0.41
LCN2-205ENST00000487719 PALLDQ8WX93 1383 aa12.46□□□□□ -0.41
LCN2-205ENST00000487719 PAPPAQ13219 1627 aa12.46□□□□□ -0.41
LCN2-205ENST00000487719 TUBGCP6Q96RT7 1819 aa12.46□□□□□ -0.42
LCN2-205ENST00000487719 FCHSD2O94868 740 aa12.45□□□□□ -0.42
LCN2-205ENST00000487719 ZNF831Q5JPB2 1677 aa12.45□□□□□ -0.42
LCN2-205ENST00000487719 MAPK8IP3Q9UPT6 1336 aa12.44□□□□□ -0.42
LCN2-205ENST00000487719 PRKAR2BP31323 418 aa12.44□□□□□ -0.42
LCN2-205ENST00000487719 PIGBQ92521 554 aa12.44□□□□□ -0.42
LCN2-205ENST00000487719 MAP3K5Q99683 1374 aa12.43□□□□□ -0.42
LCN2-205ENST00000487719 CASZ1Q86V15 1759 aa12.43□□□□□ -0.42
LCN2-205ENST00000487719 GNAT3A8MTJ3 354 aa12.43□□□□□ -0.42
LCN2-205ENST00000487719 SLC15A2Q16348 729 aa12.43□□□□□ -0.42
LCN2-205ENST00000487719 PROM2Q8N271 834 aa12.43□□□□□ -0.42
LCN2-205ENST00000487719 KDM6AO15550 1401 aaPredicted RBP12.43□□□□□ -0.42
LCN2-205ENST00000487719 C4BP0C0L5 1744 aa12.42□□□□□ -0.42
LCN2-205ENST00000487719 ADAMTS7Q9UKP4 1686 aa12.42□□□□□ -0.42
LCN2-205ENST00000487719 TEFQ10587 303 aa12.42□□□□□ -0.42
LCN2-205ENST00000487719 WDR43Q15061 677 aaKnown RBP eCLIP12.42□□□□□ -0.42
LCN2-205ENST00000487719 MTHFSDQ2M296 383 aaKnown RBP12.42□□□□□ -0.42
LCN2-205ENST00000487719 RTF1Q92541 710 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms