RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 NMRK2Q9NPI5 230 aa18.12■□□□□ 0.49
SGIP1-212ENST00000487507 CCNL1Q9UK58 526 aaPredicted RBP18.12■□□□□ 0.49
SGIP1-212ENST00000487507 N4BP2Q86UW6 1770 aaPredicted RBP18.12■□□□□ 0.49
SGIP1-212ENST00000487507 JMYQ8N9B5 988 aa18.11■□□□□ 0.49
SGIP1-212ENST00000487507 USP54Q70EL1 1684 aa18.1■□□□□ 0.49
SGIP1-212ENST00000487507 PRIM1P49642 420 aaKnown RBP18.1■□□□□ 0.49
SGIP1-212ENST00000487507 ERBB3P21860 1342 aa18.08■□□□□ 0.49
SGIP1-212ENST00000487507 RGPD2P0DJD1 1756 aa18.07■□□□□ 0.48
SGIP1-212ENST00000487507 C16orf71Q8IYS4 520 aaPredicted RBP18.07■□□□□ 0.48
SGIP1-212ENST00000487507 CICQ96RK0 1608 aaPredicted RBP18.07■□□□□ 0.48
SGIP1-212ENST00000487507 KIAA1210Q9ULL0 1709 aa18.06■□□□□ 0.48
SGIP1-212ENST00000487507 TTC21BQ7Z4L5 1316 aa18.06■□□□□ 0.48
SGIP1-212ENST00000487507 NSD2O96028 1365 aa18.04■□□□□ 0.48
SGIP1-212ENST00000487507 ANKRD24Q8TF21 1146 aa18.04■□□□□ 0.48
SGIP1-212ENST00000487507 ANKRD36BQ8N2N9 1353 aa18.04■□□□□ 0.48
SGIP1-212ENST00000487507 PKD1L3Q7Z443 1732 aa18.03■□□□□ 0.48
SGIP1-212ENST00000487507 TOGARAM1Q9Y4F4 1720 aa18.03■□□□□ 0.48
SGIP1-212ENST00000487507 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
SGIP1-212ENST00000487507 CENPJQ9HC77 1338 aaPredicted RBP18.03■□□□□ 0.48
SGIP1-212ENST00000487507 HSPA1AP0DMV8 641 aaKnown RBP18.03■□□□□ 0.48
SGIP1-212ENST00000487507 HSPA1BP0DMV9 641 aaKnown RBP18.03■□□□□ 0.48
SGIP1-212ENST00000487507 RBM46Q8TBY0 533 aaKnown RBP18.03■□□□□ 0.48
SGIP1-212ENST00000487507 SMIM5Q71RC9 77 aa18.02■□□□□ 0.48
SGIP1-212ENST00000487507 KIAA1551Q9HCM1 1747 aa18.01■□□□□ 0.47
SGIP1-212ENST00000487507 NBPF1Q3BBV0 1214 aa18.01■□□□□ 0.47
SGIP1-212ENST00000487507 USP47Q96K76 1375 aa18.01■□□□□ 0.47
SGIP1-212ENST00000487507 C4BP0C0L5 1744 aa18.01■□□□□ 0.47
SGIP1-212ENST00000487507 FAM208AQ9UK61 1670 aaKnown RBP18■□□□□ 0.47
SGIP1-212ENST00000487507 PHF14O94880 888 aa18■□□□□ 0.47
SGIP1-212ENST00000487507 MON2Q7Z3U7 1717 aa18■□□□□ 0.47
SGIP1-212ENST00000487507 ARHGAP27Q6ZUM4 889 aa17.99■□□□□ 0.47
SGIP1-212ENST00000487507 LTV1Q96GA3 475 aaPredicted RBP17.99■□□□□ 0.47
SGIP1-212ENST00000487507 KIF13BQ9NQT8 1826 aa17.98■□□□□ 0.47
SGIP1-212ENST00000487507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.98■□□□□ 0.47
SGIP1-212ENST00000487507 BCS1LQ9Y276 419 aa17.98■□□□□ 0.47
SGIP1-212ENST00000487507 TTC21AQ8NDW8 1320 aa17.98■□□□□ 0.47
SGIP1-212ENST00000487507 KCPQ6ZWJ8 1503 aa17.97■□□□□ 0.47
SGIP1-212ENST00000487507 TNRC6CQ9HCJ0 1690 aaKnown RBP17.96■□□□□ 0.47
SGIP1-212ENST00000487507 FSTL1Q12841 308 aa17.96■□□□□ 0.47
SGIP1-212ENST00000487507 AMIGO3Q86WK7 504 aa17.96■□□□□ 0.47
SGIP1-212ENST00000487507 FLAD1Q8NFF5 587 aa17.96■□□□□ 0.47
SGIP1-212ENST00000487507 STAC3Q96MF2 364 aa17.96■□□□□ 0.47
SGIP1-212ENST00000487507 BRCA1P38398 1863 aaKnown RBP17.96■□□□□ 0.47
SGIP1-212ENST00000487507 ITGB4P16144 1822 aa17.95■□□□□ 0.46
SGIP1-212ENST00000487507 KTN1Q86UP2 1357 aaKnown RBP17.95■□□□□ 0.46
SGIP1-212ENST00000487507 ZNF692Q9BU19 519 aaPredicted RBP17.94■□□□□ 0.46
SGIP1-212ENST00000487507 ARFGEF1Q9Y6D6 1849 aa17.93■□□□□ 0.46
SGIP1-212ENST00000487507 AK7Q96M32 723 aa17.93■□□□□ 0.46
SGIP1-212ENST00000487507 RRAGCQ9HB90 399 aa17.93■□□□□ 0.46
SGIP1-212ENST00000487507 PXDNLA1KZ92 1463 aa17.93■□□□□ 0.46
SGIP1-212ENST00000487507 SBF1O95248 1867 aa17.92■□□□□ 0.46
SGIP1-212ENST00000487507 C9orf131Q5VYM1 1079 aa17.92■□□□□ 0.46
SGIP1-212ENST00000487507 A0A0G2JLW4 131 aa17.91■□□□□ 0.46
SGIP1-212ENST00000487507 NME9Q86XW9 330 aa17.91■□□□□ 0.46
SGIP1-212ENST00000487507 EVC2Q86UK5 1308 aa17.91■□□□□ 0.46
SGIP1-212ENST00000487507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.9■□□□□ 0.46
SGIP1-212ENST00000487507 ZCRB1Q8TBF4 217 aaKnown RBP17.9■□□□□ 0.46
SGIP1-212ENST00000487507 PALLDQ8WX93 1383 aa17.9■□□□□ 0.46
SGIP1-212ENST00000487507 MEGF6O75095 1541 aa17.89■□□□□ 0.45
SGIP1-212ENST00000487507 FCHSD2O94868 740 aa17.89■□□□□ 0.45
SGIP1-212ENST00000487507 SMC1BQ8NDV3 1235 aa17.88■□□□□ 0.45
SGIP1-212ENST00000487507 KDM2BQ8NHM5 1336 aa17.88■□□□□ 0.45
SGIP1-212ENST00000487507 PLEKHG2Q9H7P9 1386 aa17.88■□□□□ 0.45
SGIP1-212ENST00000487507 CCDC88AQ3V6T2 1871 aa17.86■□□□□ 0.45
SGIP1-212ENST00000487507 MMP10P09238 476 aa17.86■□□□□ 0.45
SGIP1-212ENST00000487507 MPRIPQ6WCQ1 1025 aa17.86■□□□□ 0.45
SGIP1-212ENST00000487507 RAB3GAP2Q9H2M9 1393 aa17.86■□□□□ 0.45
SGIP1-212ENST00000487507 FAM161AQ3B820 660 aa17.85■□□□□ 0.45
SGIP1-212ENST00000487507 USP31Q70CQ4 1352 aa17.85■□□□□ 0.45
SGIP1-212ENST00000487507 RNF181Q9P0P0 153 aa17.84■□□□□ 0.45
SGIP1-212ENST00000487507 PCDH10Q9P2E7 1040 aa17.84■□□□□ 0.45
SGIP1-212ENST00000487507 DPEP1P16444 411 aa17.83■□□□□ 0.44
SGIP1-212ENST00000487507 MAP2P11137 1827 aaKnown RBP17.83■□□□□ 0.44
SGIP1-212ENST00000487507 NSD3Q9BZ95 1437 aa17.82■□□□□ 0.44
SGIP1-212ENST00000487507 IP6K1Q92551 441 aa17.82■□□□□ 0.44
SGIP1-212ENST00000487507 TGFB2P61812 414 aa17.81■□□□□ 0.44
SGIP1-212ENST00000487507 USHBP1Q8N6Y0 703 aa17.81■□□□□ 0.44
SGIP1-212ENST00000487507 C4AP0C0L4 1744 aa17.81■□□□□ 0.44
SGIP1-212ENST00000487507 C10orf71Q711Q0 1435 aa17.81■□□□□ 0.44
SGIP1-212ENST00000487507 SSFA2P28290 1259 aa17.8■□□□□ 0.44
SGIP1-212ENST00000487507 GNPATO15228 680 aa17.79■□□□□ 0.44
SGIP1-212ENST00000487507 SBNO2Q9Y2G9 1366 aa17.79■□□□□ 0.44
SGIP1-212ENST00000487507 FOXN1O15353 648 aa17.78■□□□□ 0.44
SGIP1-212ENST00000487507 LINC00116Q8NCU8 138 aa17.78■□□□□ 0.44
SGIP1-212ENST00000487507 MKRN1Q9UHC7 482 aaKnown RBP17.78■□□□□ 0.44
SGIP1-212ENST00000487507 TIAM2Q8IVF5 1701 aa17.78■□□□□ 0.44
SGIP1-212ENST00000487507 FBLN1P23142 703 aa17.77■□□□□ 0.44
SGIP1-212ENST00000487507 HMGB2P26583 209 aaKnown RBP17.77■□□□□ 0.44
SGIP1-212ENST00000487507 TMC1Q8TDI8 760 aa17.76■□□□□ 0.43
SGIP1-212ENST00000487507 CD163L1Q9NR16 1453 aa17.75■□□□□ 0.43
SGIP1-212ENST00000487507 AMPHP49418 695 aa17.75■□□□□ 0.43
SGIP1-212ENST00000487507 SMARCC1Q92922 1105 aaPredicted RBP17.75■□□□□ 0.43
SGIP1-212ENST00000487507 HOXC9P31274 260 aa17.74■□□□□ 0.43
SGIP1-212ENST00000487507 RAPGEF4Q8WZA2 1011 aa17.74■□□□□ 0.43
SGIP1-212ENST00000487507 CCDC87Q9NVE4 849 aa17.74■□□□□ 0.43
SGIP1-212ENST00000487507 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
SGIP1-212ENST00000487507 TATP17735 454 aaPredicted RBP17.72■□□□□ 0.43
SGIP1-212ENST00000487507 KCNA3P22001 575 aa17.72■□□□□ 0.43
SGIP1-212ENST00000487507 NBPF6Q5VWK0 638 aa17.72■□□□□ 0.43
SGIP1-212ENST00000487507 NBPF4Q96M43 638 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms