RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 IL2RBP14784 551 aa22.24■■□□□ 1.15
NF1-211ENST00000487476 RIPK4P57078 832 aa22.24■■□□□ 1.15
NF1-211ENST00000487476 QTRT2Q9H974 415 aaKnown RBP22.22■■□□□ 1.15
NF1-211ENST00000487476 PLEKHO1Q53GL0 409 aaPredicted RBP22.22■■□□□ 1.15
NF1-211ENST00000487476 TRIM35Q9UPQ4 493 aa22.22■■□□□ 1.15
NF1-211ENST00000487476 FAM98CQ17RN3 349 aaKnown RBP22.2■■□□□ 1.15
NF1-211ENST00000487476 OVOS2A0A0G2JMS6 1433 aa22.2■■□□□ 1.15
NF1-211ENST00000487476 DISP2A7MBM2 1401 aa22.2■■□□□ 1.14
NF1-211ENST00000487476 ZNF530Q6P9A1 599 aaPredicted RBP22.2■■□□□ 1.14
NF1-211ENST00000487476 THRAP3Q9Y2W1 955 aaKnown RBP22.2■■□□□ 1.14
NF1-211ENST00000487476 ATRNO75882 1429 aa22.19■■□□□ 1.14
NF1-211ENST00000487476 AMOTQ4VCS5 1084 aa22.19■■□□□ 1.14
NF1-211ENST00000487476 GAS2L2Q8NHY3 880 aa22.19■■□□□ 1.14
NF1-211ENST00000487476 GJD4Q96KN9 370 aaPredicted RBP22.19■■□□□ 1.14
NF1-211ENST00000487476 TRPC5Q9UL62 973 aaPredicted RBP22.19■■□□□ 1.14
NF1-211ENST00000487476 DCTN1Q14203 1278 aa22.19■■□□□ 1.14
NF1-211ENST00000487476 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.18■■□□□ 1.14
NF1-211ENST00000487476 WWC1Q8IX03 1113 aa22.18■■□□□ 1.14
NF1-211ENST00000487476 ZCRB1Q8TBF4 217 aaKnown RBP22.18■■□□□ 1.14
NF1-211ENST00000487476 THUMPD2Q9BTF0 503 aaKnown RBP22.18■■□□□ 1.14
NF1-211ENST00000487476 ZBED9Q6R2W3 1325 aa22.18■■□□□ 1.14
NF1-211ENST00000487476 BARGINQ6ZT62 677 aa22.18■■□□□ 1.14
NF1-211ENST00000487476 PHF23Q9BUL5 403 aaPredicted RBP22.17■■□□□ 1.14
NF1-211ENST00000487476 RGS17Q9UGC6 210 aaPredicted RBP22.17■■□□□ 1.14
NF1-211ENST00000487476 SPG7Q9UQ90 795 aa22.17■■□□□ 1.14
NF1-211ENST00000487476 CYP27B1O15528 508 aa22.17■■□□□ 1.14
NF1-211ENST00000487476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.17■■□□□ 1.144e-7■■■□□ 17.6
NF1-211ENST00000487476 MCM10Q7L590 875 aa22.16■■□□□ 1.14
NF1-211ENST00000487476 ZNF521Q96K83 1311 aa22.16■■□□□ 1.14
NF1-211ENST00000487476 SUPT16HQ9Y5B9 1047 aaKnown RBP22.15■■□□□ 1.14
NF1-211ENST00000487476 DDX54Q8TDD1 881 aaKnown RBP22.15■■□□□ 1.14
NF1-211ENST00000487476 GNAT3A8MTJ3 354 aa22.14■■□□□ 1.14
NF1-211ENST00000487476 CCDC27Q2M243 656 aa22.14■■□□□ 1.14
NF1-211ENST00000487476 ZNF772Q68DY9 489 aaPredicted RBP22.14■■□□□ 1.14
NF1-211ENST00000487476 GLI3P10071 1580 aa22.14■■□□□ 1.13
NF1-211ENST00000487476 PHKG2P15735 406 aa22.13■■□□□ 1.13
NF1-211ENST00000487476 AKAP4Q5JQC9 854 aa22.13■■□□□ 1.13
NF1-211ENST00000487476 C1orf141Q5JVX7 400 aa22.13■■□□□ 1.13
NF1-211ENST00000487476 MPRIPQ6WCQ1 1025 aa22.13■■□□□ 1.13
NF1-211ENST00000487476 LGR6Q9HBX8 967 aa22.13■■□□□ 1.13
NF1-211ENST00000487476 PARP4Q9UKK3 1724 aaKnown RBP22.13■■□□□ 1.13
NF1-211ENST00000487476 MAP3K5Q99683 1374 aa22.13■■□□□ 1.13
NF1-211ENST00000487476 NGEFQ8N5V2 710 aa22.13■■□□□ 1.13
NF1-211ENST00000487476 CDCA7LQ96GN5 454 aa22.13■■□□□ 1.13
NF1-211ENST00000487476 SPINK5Q9NQ38 1064 aaPredicted RBP22.13■■□□□ 1.13
NF1-211ENST00000487476 EXOC5O00471 708 aa22.12■■□□□ 1.13
NF1-211ENST00000487476 IL17REQ8NFR9 667 aa22.12■■□□□ 1.13
NF1-211ENST00000487476 CDCA7Q9BWT1 371 aaPredicted RBP22.12■■□□□ 1.13
NF1-211ENST00000487476 DLG5Q8TDM6 1919 aa22.12■■□□□ 1.13
NF1-211ENST00000487476 A0A0G2JS52 829 aa22.11■■□□□ 1.13
NF1-211ENST00000487476 MYT1Q01538 1121 aa22.11■■□□□ 1.13
NF1-211ENST00000487476 NCBP3Q53F19 620 aaKnown RBP22.11■■□□□ 1.13
NF1-211ENST00000487476 IFNL2Q8IZJ0 200 aa22.11■■□□□ 1.13
NF1-211ENST00000487476 PKD1L3Q7Z443 1732 aa22.11■■□□□ 1.13
NF1-211ENST00000487476 DDB1Q16531 1140 aa22.1■■□□□ 1.13
NF1-211ENST00000487476 RTF1Q92541 710 aaKnown RBP22.1■■□□□ 1.13
NF1-211ENST00000487476 PLEKHG2Q9H7P9 1386 aa22.1■■□□□ 1.13
NF1-211ENST00000487476 PCDH11XQ9BZA7 1347 aa22.1■■□□□ 1.13
NF1-211ENST00000487476 PCDH11YQ9BZA8 1340 aa22.1■■□□□ 1.13
NF1-211ENST00000487476 LMOD3Q0VAK6 560 aa22.09■■□□□ 1.13
NF1-211ENST00000487476 POTEAQ6S8J7 498 aa22.09■■□□□ 1.13
NF1-211ENST00000487476 WNK3Q9BYP7 1800 aa22.08■■□□□ 1.13
NF1-211ENST00000487476 ONECUT3O60422 494 aaPredicted RBP22.08■■□□□ 1.13
NF1-211ENST00000487476 HTATSF1O43719 755 aaKnown RBP22.08■■□□□ 1.12
NF1-211ENST00000487476 TNS2Q63HR2 1409 aa22.07■■□□□ 1.12
NF1-211ENST00000487476 SHANK3Q9BYB0 1731 aa22.07■■□□□ 1.12
NF1-211ENST00000487476 RNMTO43148 476 aaKnown RBP22.07■■□□□ 1.12
NF1-211ENST00000487476 GOLGA2Q08379 1002 aa22.07■■□□□ 1.12
NF1-211ENST00000487476 WDR63Q8IWG1 891 aa22.07■■□□□ 1.12
NF1-211ENST00000487476 SEPT12Q8IYM1 358 aa22.06■■□□□ 1.12
NF1-211ENST00000487476 MARCH10Q8NA82 808 aaPredicted RBP22.06■■□□□ 1.12
NF1-211ENST00000487476 KDM6AO15550 1401 aaPredicted RBP22.06■■□□□ 1.12
NF1-211ENST00000487476 RBM6P78332 1123 aaKnown RBP22.05■■□□□ 1.12
NF1-211ENST00000487476 LAS1LQ9Y4W2 734 aaKnown RBP22.05■■□□□ 1.12
NF1-211ENST00000487476 LRRC37A3O60309 1634 aa22.05■■□□□ 1.12
NF1-211ENST00000487476 CEMIPQ8WUJ3 1361 aa22.04■■□□□ 1.12
NF1-211ENST00000487476 NKX1-1Q15270 411 aaPredicted RBP22.04■■□□□ 1.12
NF1-211ENST00000487476 DCAF5Q96JK2 942 aa22.04■■□□□ 1.12
NF1-211ENST00000487476 THSD7AQ9UPZ6 1657 aa22.03■■□□□ 1.12
NF1-211ENST00000487476 SLFN5Q08AF3 891 aa22.03■■□□□ 1.12
NF1-211ENST00000487476 MIS18AQ9NYP9 233 aa22.03■■□□□ 1.12
NF1-211ENST00000487476 RXRBP28702 533 aa22.03■■□□□ 1.12
NF1-211ENST00000487476 FAM182BQ5T319 152 aa22.03■■□□□ 1.12
NF1-211ENST00000487476 HSP90AB1P08238 724 aaKnown RBP22.01■■□□□ 1.11
NF1-211ENST00000487476 TSR2Q969E8 191 aaKnown RBP22.01■■□□□ 1.11
NF1-211ENST00000487476 PDE3BQ13370 1112 aa22.01■■□□□ 1.11
NF1-211ENST00000487476 IL16Q14005 1332 aa21.99■■□□□ 1.11
NF1-211ENST00000487476 E9PSI1 815 aa21.99■■□□□ 1.11
NF1-211ENST00000487476 ZNF853P0CG23 659 aa21.99■■□□□ 1.11
NF1-211ENST00000487476 DUSP27Q5VZP5 1158 aa21.99■■□□□ 1.11
NF1-211ENST00000487476 TRMT2AQ8IZ69 625 aaKnown RBP21.99■■□□□ 1.11
NF1-211ENST00000487476 NFATC2IPQ8NCF5 419 aa21.99■■□□□ 1.11
NF1-211ENST00000487476 CALD1Q05682 793 aaKnown RBP21.99■■□□□ 1.11
NF1-211ENST00000487476 TEFQ10587 303 aa21.99■■□□□ 1.11
NF1-211ENST00000487476 CFAP44Q96MT7 982 aa21.99■■□□□ 1.11
NF1-211ENST00000487476 IFT57Q9NWB7 429 aa21.98■■□□□ 1.11
NF1-211ENST00000487476 TAF7Q15545 349 aaPredicted RBP21.97■■□□□ 1.11
NF1-211ENST00000487476 SLC52A2Q9HAB3 445 aa21.97■■□□□ 1.11
NF1-211ENST00000487476 MBIPQ9NS73 344 aa21.97■■□□□ 1.11
NF1-211ENST00000487476 ADAMTS7Q9UKP4 1686 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms