RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 TUBGCP6Q96RT7 1819 aa29.89■■■□□ 2.38
RPL35-203ENST00000487431 NBPF6Q5VWK0 638 aa29.88■■■□□ 2.37
RPL35-203ENST00000487431 ZCRB1Q8TBF4 217 aaKnown RBP29.88■■■□□ 2.37
RPL35-203ENST00000487431 NBPF4Q96M43 638 aa29.88■■■□□ 2.37
RPL35-203ENST00000487431 SGIP1Q9BQI5 828 aa29.88■■■□□ 2.37
RPL35-203ENST00000487431 NSD2O96028 1365 aa29.88■■■□□ 2.37
RPL35-203ENST00000487431 INSRP06213 1382 aa29.88■■■□□ 2.37
RPL35-203ENST00000487431 SMG6Q86US8 1419 aaKnown RBP29.88■■■□□ 2.37
RPL35-203ENST00000487431 SLC27A3Q5K4L6 730 aa29.87■■■□□ 2.37
RPL35-203ENST00000487431 ATF5Q9Y2D1 282 aaPredicted RBP29.87■■■□□ 2.37
RPL35-203ENST00000487431 CGNL1Q0VF96 1302 aa29.87■■■□□ 2.37
RPL35-203ENST00000487431 CARD14Q9BXL6 1004 aa29.86■■■□□ 2.37
RPL35-203ENST00000487431 FLT4P35916 1363 aa29.86■■■□□ 2.37
RPL35-203ENST00000487431 ZNF827Q17R98 1081 aa29.85■■■□□ 2.37
RPL35-203ENST00000487431 AKT1S1Q96B36 256 aa29.83■■■□□ 2.37
RPL35-203ENST00000487431 MAP2P11137 1827 aaKnown RBP29.82■■■□□ 2.36
RPL35-203ENST00000487431 NSD3Q9BZ95 1437 aa29.82■■■□□ 2.36
RPL35-203ENST00000487431 PRIM1P49642 420 aaKnown RBP29.82■■■□□ 2.36
RPL35-203ENST00000487431 DCAF8L1A6NGE4 600 aa29.81■■■□□ 2.36
RPL35-203ENST00000487431 HSP90AB2PQ58FF8 381 aa29.81■■■□□ 2.36
RPL35-203ENST00000487431 PKD1L3Q7Z443 1732 aa29.81■■■□□ 2.36
RPL35-203ENST00000487431 USHBP1Q8N6Y0 703 aa29.79■■■□□ 2.36
RPL35-203ENST00000487431 NCAPD2Q15021 1401 aa29.79■■■□□ 2.36
RPL35-203ENST00000487431 YY1P25490 414 aa29.78■■■□□ 2.36
RPL35-203ENST00000487431 RAPGEF4Q8WZA2 1011 aa29.78■■■□□ 2.36
RPL35-203ENST00000487431 SYTL4Q96C24 671 aaPredicted RBP29.78■■■□□ 2.36
RPL35-203ENST00000487431 FHDC1Q9C0D6 1143 aaPredicted RBP29.77■■■□□ 2.36
RPL35-203ENST00000487431 ITGB4P16144 1822 aa29.76■■■□□ 2.35
RPL35-203ENST00000487431 SYT17Q9BSW7 474 aa29.76■■■□□ 2.35
RPL35-203ENST00000487431 MAP3K5Q99683 1374 aa29.76■■■□□ 2.35
RPL35-203ENST00000487431 TOGARAM1Q9Y4F4 1720 aa29.75■■■□□ 2.35
RPL35-203ENST00000487431 TAF1LQ8IZX4 1826 aa29.74■■■□□ 2.35
RPL35-203ENST00000487431 TATP17735 454 aaPredicted RBP29.74■■■□□ 2.35
RPL35-203ENST00000487431 SLC16A10Q8TF71 515 aa29.74■■■□□ 2.35
RPL35-203ENST00000487431 C5P01031 1676 aa29.73■■■□□ 2.35
RPL35-203ENST00000487431 CHD4Q14839 1912 aa29.73■■■□□ 2.35
RPL35-203ENST00000487431 PNPLA7Q6ZV29 1317 aa29.72■■■□□ 2.35
RPL35-203ENST00000487431 PCDH11XQ9BZA7 1347 aa29.72■■■□□ 2.35
RPL35-203ENST00000487431 PCDH11YQ9BZA8 1340 aa29.72■■■□□ 2.35
RPL35-203ENST00000487431 ARXQ96QS3 562 aa29.72■■■□□ 2.35
RPL35-203ENST00000487431 EMILIN1Q9Y6C2 1016 aa29.72■■■□□ 2.35
RPL35-203ENST00000487431 KCNQ4P56696 695 aa29.7■■■□□ 2.35
RPL35-203ENST00000487431 UTRNP46939 3433 aa29.68■■■□□ 2.34
RPL35-203ENST00000487431 PCGF6Q9BYE7 350 aa29.68■■■□□ 2.34
RPL35-203ENST00000487431 CCNL1Q9UK58 526 aaPredicted RBP29.68■■■□□ 2.34
RPL35-203ENST00000487431 WASHC2AQ641Q2 1341 aa29.68■■■□□ 2.34
RPL35-203ENST00000487431 TFCP2L1Q9NZI6 479 aa29.67■■■□□ 2.34
RPL35-203ENST00000487431 CYP27B1O15528 508 aa29.66■■■□□ 2.34
RPL35-203ENST00000487431 POLKQ9UBT6 870 aa29.61■■■□□ 2.33
RPL35-203ENST00000487431 NKX1-1Q15270 411 aaPredicted RBP29.6■■■□□ 2.33
RPL35-203ENST00000487431 PPM1GO15355 546 aaPredicted RBP29.59■■■□□ 2.33
RPL35-203ENST00000487431 HMGB2P26583 209 aaKnown RBP29.59■■■□□ 2.33
RPL35-203ENST00000487431 POLD1P28340 1107 aa29.59■■■□□ 2.33
RPL35-203ENST00000487431 PALLDQ8WX93 1383 aa29.59■■■□□ 2.33
RPL35-203ENST00000487431 C4BP0C0L5 1744 aa29.58■■■□□ 2.33
RPL35-203ENST00000487431 EIF4G2P78344 907 aaKnown RBP eCLIP29.58■■■□□ 2.33
RPL35-203ENST00000487431 EYA1Q99502 592 aa29.58■■■□□ 2.33
RPL35-203ENST00000487431 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.58■■■□□ 2.335e-19■□□□□ 8.3
RPL35-203ENST00000487431 UBR3Q6ZT12 1888 aa29.57■■■□□ 2.32
RPL35-203ENST00000487431 PLEKHG2Q9H7P9 1386 aa29.56■■■□□ 2.32
RPL35-203ENST00000487431 MPRIPQ6WCQ1 1025 aa29.56■■■□□ 2.32
RPL35-203ENST00000487431 SPG7Q9UQ90 795 aa29.56■■■□□ 2.32
RPL35-203ENST00000487431 COL23A1Q86Y22 540 aaPredicted RBP29.55■■■□□ 2.32
RPL35-203ENST00000487431 HSPA5P11021 654 aaKnown RBP29.54■■■□□ 2.32
RPL35-203ENST00000487431 SMARCC1Q92922 1105 aaPredicted RBP29.53■■■□□ 2.32
RPL35-203ENST00000487431 POLR3GLQ9BT43 218 aa29.52■■■□□ 2.32
RPL35-203ENST00000487431 PIGBQ92521 554 aa29.51■■■□□ 2.31
RPL35-203ENST00000487431 EIF4A2Q14240 407 aaKnown RBP29.5■■■□□ 2.31
RPL35-203ENST00000487431 GOLGB1Q14789 3259 aaKnown RBP29.5■■■□□ 2.31
RPL35-203ENST00000487431 FLAD1Q8NFF5 587 aa29.48■■■□□ 2.31
RPL35-203ENST00000487431 PANK3Q9H999 370 aa29.48■■■□□ 2.31
RPL35-203ENST00000487431 IGSF1Q8N6C5 1336 aa29.46■■■□□ 2.31
RPL35-203ENST00000487431 PHKG2P15735 406 aa29.46■■■□□ 2.31
RPL35-203ENST00000487431 TNNT2P45379 298 aaPredicted RBP29.46■■■□□ 2.31
RPL35-203ENST00000487431 IFNL2Q8IZJ0 200 aa29.46■■■□□ 2.31
RPL35-203ENST00000487431 ZNF784Q8NCA9 323 aaPredicted RBP29.46■■■□□ 2.31
RPL35-203ENST00000487431 ZNF831Q5JPB2 1677 aa29.46■■■□□ 2.31
RPL35-203ENST00000487431 MSH5O43196 834 aa29.45■■■□□ 2.31
RPL35-203ENST00000487431 GPR162Q16538 588 aa29.44■■■□□ 2.3
RPL35-203ENST00000487431 KLHL34Q8N239 644 aa29.44■■■□□ 2.3
RPL35-203ENST00000487431 NLGN2Q8NFZ4 835 aa29.44■■■□□ 2.3
RPL35-203ENST00000487431 CCER1Q8TC90 406 aaPredicted RBP29.43■■■□□ 2.3
RPL35-203ENST00000487431 TMOD3Q9NYL9 352 aa29.42■■■□□ 2.3
RPL35-203ENST00000487431 LOC102724428A0A0B4J2F2 783 aa29.4■■■□□ 2.3
RPL35-203ENST00000487431 SIK1P57059 783 aa29.4■■■□□ 2.3
RPL35-203ENST00000487431 AMIGO3Q86WK7 504 aa29.4■■■□□ 2.3
RPL35-203ENST00000487431 AK7Q96M32 723 aa29.4■■■□□ 2.3
RPL35-203ENST00000487431 MSL1Q68DK7 614 aa29.39■■■□□ 2.3
RPL35-203ENST00000487431 ASAP1Q9ULH1 1129 aa29.38■■■□□ 2.29
RPL35-203ENST00000487431 COL5A3P25940 1745 aaPredicted RBP29.37■■■□□ 2.29
RPL35-203ENST00000487431 LINC00116Q8NCU8 138 aa29.37■■■□□ 2.29
RPL35-203ENST00000487431 SSFA2P28290 1259 aa29.35■■■□□ 2.29
RPL35-203ENST00000487431 ATG3Q9NT62 314 aa29.35■■■□□ 2.29
RPL35-203ENST00000487431 CD2APQ9Y5K6 639 aa29.35■■■□□ 2.29
RPL35-203ENST00000487431 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.34■■■□□ 2.29
RPL35-203ENST00000487431 KDRP35968 1356 aa29.34■■■□□ 2.29
RPL35-203ENST00000487431 ERVV-2B6SEH9 535 aa29.33■■■□□ 2.29
RPL35-203ENST00000487431 ITPK1Q13572 414 aa29.33■■■□□ 2.29
RPL35-203ENST00000487431 MORC1Q86VD1 984 aa29.33■■■□□ 2.29
RPL35-203ENST00000487431 HSP90AB1P08238 724 aaKnown RBP29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms