RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 FAM208AQ9UK61 1670 aaKnown RBP22.76■■□□□ 1.23
SRRT-212ENST00000487311 PNPLA7Q6ZV29 1317 aa22.76■■□□□ 1.23
SRRT-212ENST00000487311 ANKRD36BQ8N2N9 1353 aa22.76■■□□□ 1.23
SRRT-212ENST00000487311 USHBP1Q8N6Y0 703 aa22.75■■□□□ 1.23
SRRT-212ENST00000487311 MEGF6O75095 1541 aa22.75■■□□□ 1.23
SRRT-212ENST00000487311 SLC24A1O60721 1099 aa22.73■■□□□ 1.23
SRRT-212ENST00000487311 TFCP2L1Q9NZI6 479 aa22.73■■□□□ 1.23
SRRT-212ENST00000487311 SHANK3Q9BYB0 1731 aa22.73■■□□□ 1.23
SRRT-212ENST00000487311 SLC16A10Q8TF71 515 aa22.72■■□□□ 1.23
SRRT-212ENST00000487311 MAP3K5Q99683 1374 aa22.71■■□□□ 1.23
SRRT-212ENST00000487311 TMF1P82094 1093 aa22.7■■□□□ 1.22
SRRT-212ENST00000487311 HSP90AB2PQ58FF8 381 aa22.7■■□□□ 1.22
SRRT-212ENST00000487311 DOT1LQ8TEK3 1739 aa22.69■■□□□ 1.22
SRRT-212ENST00000487311 KLHL34Q8N239 644 aa22.68■■□□□ 1.22
SRRT-212ENST00000487311 CCNL1Q9UK58 526 aaPredicted RBP22.68■■□□□ 1.22
SRRT-212ENST00000487311 TUBGCP6Q96RT7 1819 aa22.68■■□□□ 1.22
SRRT-212ENST00000487311 GOLGB1Q14789 3259 aaKnown RBP22.68■■□□□ 1.22
SRRT-212ENST00000487311 LY75O60449 1722 aa22.68■■□□□ 1.22
SRRT-212ENST00000487311 RTL1A6NKG5 1358 aa22.67■■□□□ 1.22
SRRT-212ENST00000487311 GPR162Q16538 588 aa22.67■■□□□ 1.22
SRRT-212ENST00000487311 CARD14Q9BXL6 1004 aa22.67■■□□□ 1.22
SRRT-212ENST00000487311 USP47Q96K76 1375 aa22.66■■□□□ 1.22
SRRT-212ENST00000487311 QSER1Q2KHR3 1735 aa22.66■■□□□ 1.22
SRRT-212ENST00000487311 POLD1P28340 1107 aa22.66■■□□□ 1.22
SRRT-212ENST00000487311 COL23A1Q86Y22 540 aaPredicted RBP22.66■■□□□ 1.22
SRRT-212ENST00000487311 COL24A1Q17RW2 1714 aa22.65■■□□□ 1.22
SRRT-212ENST00000487311 NLGN2Q8NFZ4 835 aa22.65■■□□□ 1.22
SRRT-212ENST00000487311 RAPGEF4Q8WZA2 1011 aa22.65■■□□□ 1.22
SRRT-212ENST00000487311 CHD4Q14839 1912 aa22.65■■□□□ 1.22
SRRT-212ENST00000487311 CGNL1Q0VF96 1302 aa22.64■■□□□ 1.22
SRRT-212ENST00000487311 TATP17735 454 aaPredicted RBP22.63■■□□□ 1.21
SRRT-212ENST00000487311 INSRP06213 1382 aa22.63■■□□□ 1.21
SRRT-212ENST00000487311 CYP27B1O15528 508 aa22.61■■□□□ 1.21
SRRT-212ENST00000487311 MSH5O43196 834 aa22.61■■□□□ 1.21
SRRT-212ENST00000487311 EMILIN1Q9Y6C2 1016 aa22.61■■□□□ 1.21
SRRT-212ENST00000487311 PELP1Q8IZL8 1130 aaKnown RBP22.6■■□□□ 1.21
SRRT-212ENST00000487311 MSL1Q68DK7 614 aa22.59■■□□□ 1.21
SRRT-212ENST00000487311 MPRIPQ6WCQ1 1025 aa22.59■■□□□ 1.21
SRRT-212ENST00000487311 FLT4P35916 1363 aa22.59■■□□□ 1.21
SRRT-212ENST00000487311 SMG6Q86US8 1419 aaKnown RBP22.58■■□□□ 1.21
SRRT-212ENST00000487311 PCDH11XQ9BZA7 1347 aa22.57■■□□□ 1.2
SRRT-212ENST00000487311 PCDH11YQ9BZA8 1340 aa22.57■■□□□ 1.2
SRRT-212ENST00000487311 YBX3P16989 372 aaKnown RBP eCLIP22.56■■□□□ 1.2
SRRT-212ENST00000487311 TRIM26Q12899 539 aaPredicted RBP22.56■■□□□ 1.2
SRRT-212ENST00000487311 CDCA8Q53HL2 280 aa22.56■■□□□ 1.2
SRRT-212ENST00000487311 AMIGO3Q86WK7 504 aa22.56■■□□□ 1.2
SRRT-212ENST00000487311 KIF20BQ96Q89 1820 aa22.55■■□□□ 1.2
SRRT-212ENST00000487311 PPM1GO15355 546 aaPredicted RBP22.55■■□□□ 1.2
SRRT-212ENST00000487311 SMIM5Q71RC9 77 aa22.55■■□□□ 1.2
SRRT-212ENST00000487311 KIF24Q5T7B8 1368 aa22.54■■□□□ 1.2
SRRT-212ENST00000487311 PALLDQ8WX93 1383 aa22.54■■□□□ 1.2
SRRT-212ENST00000487311 C1QTNF8P60827 252 aa22.54■■□□□ 1.2
SRRT-212ENST00000487311 NSD3Q9BZ95 1437 aa22.54■■□□□ 1.2
SRRT-212ENST00000487311 PIGBQ92521 554 aa22.53■■□□□ 1.2
SRRT-212ENST00000487311 NKX1-1Q15270 411 aaPredicted RBP22.51■■□□□ 1.19
SRRT-212ENST00000487311 EYA1Q99502 592 aa22.51■■□□□ 1.19
SRRT-212ENST00000487311 TOGARAM1Q9Y4F4 1720 aa22.51■■□□□ 1.19
SRRT-212ENST00000487311 C5P01031 1676 aa22.5■■□□□ 1.19
SRRT-212ENST00000487311 WASHC2AQ641Q2 1341 aa22.5■■□□□ 1.19
SRRT-212ENST00000487311 ITGB4P16144 1822 aa22.5■■□□□ 1.19
SRRT-212ENST00000487311 TAF1LQ8IZX4 1826 aa22.5■■□□□ 1.19
SRRT-212ENST00000487311 NCAPD2Q15021 1401 aa22.48■■□□□ 1.19
SRRT-212ENST00000487311 POLKQ9UBT6 870 aa22.48■■□□□ 1.19
SRRT-212ENST00000487311 SENP3-EIF4A1A0A087X0R7 540 aa22.47■■□□□ 1.19
SRRT-212ENST00000487311 FLAD1Q8NFF5 587 aa22.47■■□□□ 1.19
SRRT-212ENST00000487311 SMARCC1Q92922 1105 aaPredicted RBP22.47■■□□□ 1.19
SRRT-212ENST00000487311 GRIN3BO60391 1043 aa22.46■■□□□ 1.19
SRRT-212ENST00000487311 SPG7Q9UQ90 795 aa22.46■■□□□ 1.19
SRRT-212ENST00000487311 CD2APQ9Y5K6 639 aa22.46■■□□□ 1.19
SRRT-212ENST00000487311 PKD1L3Q7Z443 1732 aa22.45■■□□□ 1.19
SRRT-212ENST00000487311 LINC00116Q8NCU8 138 aa22.45■■□□□ 1.18
SRRT-212ENST00000487311 AK7Q96M32 723 aa22.45■■□□□ 1.18
SRRT-212ENST00000487311 ASAP1Q9ULH1 1129 aa22.45■■□□□ 1.18
SRRT-212ENST00000487311 C4BP0C0L5 1744 aa22.45■■□□□ 1.18
SRRT-212ENST00000487311 MAP2P11137 1827 aaKnown RBP22.45■■□□□ 1.18
SRRT-212ENST00000487311 PHF14O94880 888 aa22.44■■□□□ 1.18
SRRT-212ENST00000487311 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.43■■□□□ 1.18
SRRT-212ENST00000487311 LOC102724428A0A0B4J2F2 783 aa22.43■■□□□ 1.18
SRRT-212ENST00000487311 TNNT2P45379 298 aaPredicted RBP22.43■■□□□ 1.18
SRRT-212ENST00000487311 SIK1P57059 783 aa22.43■■□□□ 1.18
SRRT-212ENST00000487311 PHKG2P15735 406 aa22.42■■□□□ 1.18
SRRT-212ENST00000487311 ITPK1Q13572 414 aa22.42■■□□□ 1.18
SRRT-212ENST00000487311 EIF4A2Q14240 407 aaKnown RBP22.42■■□□□ 1.18
SRRT-212ENST00000487311 POLR3GLQ9BT43 218 aa22.42■■□□□ 1.18
SRRT-212ENST00000487311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.42■■□□□ 1.18
SRRT-212ENST00000487311 GIGYF1O75420 1035 aaPredicted RBP22.41■■□□□ 1.18
SRRT-212ENST00000487311 HMGB2P26583 209 aaKnown RBP22.41■■□□□ 1.18
SRRT-212ENST00000487311 TIMELESSQ9UNS1 1208 aa22.41■■□□□ 1.18
SRRT-212ENST00000487311 ANKRD26Q9UPS8 1709 aa22.4■■□□□ 1.18
SRRT-212ENST00000487311 IFNL2Q8IZJ0 200 aa22.4■■□□□ 1.18
SRRT-212ENST00000487311 ATG3Q9NT62 314 aa22.4■■□□□ 1.18
SRRT-212ENST00000487311 TMOD3Q9NYL9 352 aa22.4■■□□□ 1.18
SRRT-212ENST00000487311 UBR3Q6ZT12 1888 aa22.4■■□□□ 1.18
SRRT-212ENST00000487311 WWC3Q9ULE0 1092 aa22.39■■□□□ 1.17
SRRT-212ENST00000487311 ATP6V1AP38606 617 aa22.38■■□□□ 1.17
SRRT-212ENST00000487311 SSFA2P28290 1259 aa22.37■■□□□ 1.17
SRRT-212ENST00000487311 SLC4A9Q96Q91 983 aa22.36■■□□□ 1.17
SRRT-212ENST00000487311 GNPATO15228 680 aa22.35■■□□□ 1.17
SRRT-212ENST00000487311 PCGF6Q9BYE7 350 aa22.35■■□□□ 1.17
SRRT-212ENST00000487311 IGSF1Q8N6C5 1336 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms