RNA–Protein interactions for RNA: ENST00000487240.3

SOX2-OT-210, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 751 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-210ENST00000487240 AFF2P51816 1311 aa9.38□□□□□ -0.91
SOX2-OT-210ENST00000487240 SOS2Q07890 1332 aaPredicted RBP9.38□□□□□ -0.91
SOX2-OT-210ENST00000487240 NPHP3Q7Z494 1330 aa9.38□□□□□ -0.91
SOX2-OT-210ENST00000487240 FMN2Q9NZ56 1722 aa9.38□□□□□ -0.91
SOX2-OT-210ENST00000487240 AMHR2Q16671 573 aa9.37□□□□□ -0.91
SOX2-OT-210ENST00000487240 SIRT1Q96EB6 747 aa9.37□□□□□ -0.91
SOX2-OT-210ENST00000487240 ADGRB1O14514 1584 aa9.37□□□□□ -0.91
SOX2-OT-210ENST00000487240 PXDNQ92626 1479 aa9.36□□□□□ -0.91
SOX2-OT-210ENST00000487240 NGLY1Q96IV0 654 aa9.36□□□□□ -0.91
SOX2-OT-210ENST00000487240 HIRIP3Q9BW71 556 aaPredicted RBP9.36□□□□□ -0.91
SOX2-OT-210ENST00000487240 KDM4CQ9H3R0 1056 aa9.36□□□□□ -0.91
SOX2-OT-210ENST00000487240 BCL2L12Q9HB09 334 aa9.36□□□□□ -0.91
SOX2-OT-210ENST00000487240 DLC1Q96QB1 1528 aa9.36□□□□□ -0.91
SOX2-OT-210ENST00000487240 RXRBP28702 533 aa9.35□□□□□ -0.91
SOX2-OT-210ENST00000487240 PADI6Q6TGC4 694 aa9.35□□□□□ -0.91
SOX2-OT-210ENST00000487240 RBM27Q9P2N5 1060 aaKnown RBP9.35□□□□□ -0.91
SOX2-OT-210ENST00000487240 RGPD8O14715 1765 aaPredicted RBP9.35□□□□□ -0.91
SOX2-OT-210ENST00000487240 KRT28Q7Z3Y7 464 aa9.34□□□□□ -0.91
SOX2-OT-210ENST00000487240 KIF1AQ12756 1690 aa9.34□□□□□ -0.91
SOX2-OT-210ENST00000487240 PTPREP23469 700 aa9.33□□□□□ -0.92
SOX2-OT-210ENST00000487240 TTLL12Q14166 644 aaPredicted RBP9.33□□□□□ -0.92
SOX2-OT-210ENST00000487240 PARP9Q8IXQ6 854 aa9.33□□□□□ -0.92
SOX2-OT-210ENST00000487240 PMFBP1Q8TBY8 1022 aa9.33□□□□□ -0.92
SOX2-OT-210ENST00000487240 STAC3Q96MF2 364 aa9.33□□□□□ -0.92
SOX2-OT-210ENST00000487240 QTRT2Q9H974 415 aaKnown RBP9.33□□□□□ -0.92
SOX2-OT-210ENST00000487240 COL22A1Q8NFW1 1626 aaPredicted RBP9.33□□□□□ -0.92
SOX2-OT-210ENST00000487240 PRSS12P56730 875 aa9.32□□□□□ -0.92
SOX2-OT-210ENST00000487240 DAXXQ9UER7 740 aaPredicted RBP9.32□□□□□ -0.92
SOX2-OT-210ENST00000487240 USP21Q9UK80 565 aa9.32□□□□□ -0.92
SOX2-OT-210ENST00000487240 ADGRB2O60241 1585 aa9.32□□□□□ -0.92
SOX2-OT-210ENST00000487240 SPATA31A3Q5VYP0 1347 aa9.31□□□□□ -0.92
SOX2-OT-210ENST00000487240 USP32Q8NFA0 1604 aa9.31□□□□□ -0.92
SOX2-OT-210ENST00000487240 PPP1R3GB7ZBB8 358 aa9.31□□□□□ -0.92
SOX2-OT-210ENST00000487240 COL9A1P20849 921 aa9.31□□□□□ -0.92
SOX2-OT-210ENST00000487240 PSME1Q06323 249 aa9.31□□□□□ -0.92
SOX2-OT-210ENST00000487240 CDCA7LQ96GN5 454 aa9.31□□□□□ -0.92
SOX2-OT-210ENST00000487240 ARHGEF28Q8N1W1 1705 aaKnown RBP9.31□□□□□ -0.92
SOX2-OT-210ENST00000487240 ANKARQ7Z5J8 1434 aa9.31□□□□□ -0.92
SOX2-OT-210ENST00000487240 WASLO00401 505 aaPredicted RBP9.3□□□□□ -0.92
SOX2-OT-210ENST00000487240 OATP04181 439 aa9.3□□□□□ -0.92
SOX2-OT-210ENST00000487240 RBM6P78332 1123 aaKnown RBP9.3□□□□□ -0.92
SOX2-OT-210ENST00000487240 NEUROD1Q13562 356 aa9.3□□□□□ -0.92
SOX2-OT-210ENST00000487240 FAM161AQ3B820 660 aa9.3□□□□□ -0.92
SOX2-OT-210ENST00000487240 NBPF1Q3BBV0 1214 aa9.3□□□□□ -0.92
SOX2-OT-210ENST00000487240 TTC13Q8NBP0 860 aa9.3□□□□□ -0.92
SOX2-OT-210ENST00000487240 CABLES1Q8TDN4 633 aa9.3□□□□□ -0.92
SOX2-OT-210ENST00000487240 SIN3AQ96ST3 1273 aa9.3□□□□□ -0.92
SOX2-OT-210ENST00000487240 RGS12O14924 1447 aa9.3□□□□□ -0.92
SOX2-OT-210ENST00000487240 TNS3Q68CZ2 1445 aa9.3□□□□□ -0.92
SOX2-OT-210ENST00000487240 PRR36Q9H6K5 1346 aa9.3□□□□□ -0.92
SOX2-OT-210ENST00000487240 EIF3AQ14152 1382 aaKnown RBP9.29□□□□□ -0.92
SOX2-OT-210ENST00000487240 ADGRG1Q9Y653 693 aa9.29□□□□□ -0.92
SOX2-OT-210ENST00000487240 TULP4Q9NRJ4 1543 aa9.29□□□□□ -0.92
SOX2-OT-210ENST00000487240 ERBB3P21860 1342 aa9.29□□□□□ -0.92
SOX2-OT-210ENST00000487240 MARF1Q9Y4F3 1742 aaKnown RBP9.28□□□□□ -0.92
SOX2-OT-210ENST00000487240 ST18O60284 1047 aa9.28□□□□□ -0.92
SOX2-OT-210ENST00000487240 METTL3Q86U44 580 aaKnown RBP9.28□□□□□ -0.92
SOX2-OT-210ENST00000487240 FNBP4Q8N3X1 1017 aaPredicted RBP9.28□□□□□ -0.92
SOX2-OT-210ENST00000487240 IL27Q8NEV9 243 aa9.28□□□□□ -0.92
SOX2-OT-210ENST00000487240 L3MBTL2Q969R5 705 aa9.28□□□□□ -0.92
SOX2-OT-210ENST00000487240 KCNK17Q96T54 332 aa9.28□□□□□ -0.92
SOX2-OT-210ENST00000487240 TRPC5Q9UL62 973 aaPredicted RBP9.28□□□□□ -0.92
SOX2-OT-210ENST00000487240 GTF3C3Q9Y5Q9 886 aa9.28□□□□□ -0.92
SOX2-OT-210ENST00000487240 KIAA1210Q9ULL0 1709 aa9.28□□□□□ -0.92
SOX2-OT-210ENST00000487240 CDK12Q9NYV4 1490 aaPredicted RBP9.28□□□□□ -0.92
SOX2-OT-210ENST00000487240 SBNO1A3KN83 1393 aa9.27□□□□□ -0.93
SOX2-OT-210ENST00000487240 GPRASP1Q5JY77 1395 aa9.27□□□□□ -0.93
SOX2-OT-210ENST00000487240 CLCN1P35523 988 aa9.27□□□□□ -0.93
SOX2-OT-210ENST00000487240 MDM2Q00987 491 aaPredicted RBP9.27□□□□□ -0.93
SOX2-OT-210ENST00000487240 GIGYF2Q6Y7W6 1299 aaKnown RBP9.27□□□□□ -0.93
SOX2-OT-210ENST00000487240 NGDNQ8NEJ9 315 aaKnown RBP9.27□□□□□ -0.93
SOX2-OT-210ENST00000487240 PXYLP1Q8TE99 480 aa9.27□□□□□ -0.93
SOX2-OT-210ENST00000487240 PHOX2BQ99453 314 aa9.27□□□□□ -0.93
SOX2-OT-210ENST00000487240 CDK19Q9BWU1 502 aa9.27□□□□□ -0.93
SOX2-OT-210ENST00000487240 ATRNO75882 1429 aa9.27□□□□□ -0.93
SOX2-OT-210ENST00000487240 ARHGEF10O15013 1369 aa9.26□□□□□ -0.93
SOX2-OT-210ENST00000487240 VARS2Q5ST30 1063 aaKnown RBP9.26□□□□□ -0.93
SOX2-OT-210ENST00000487240 RBM46Q8TBY0 533 aaKnown RBP9.26□□□□□ -0.93
SOX2-OT-210ENST00000487240 NUDT16Q96DE0 195 aaKnown RBP9.26□□□□□ -0.93
SOX2-OT-210ENST00000487240 DDRGK1Q96HY6 314 aa9.26□□□□□ -0.93
SOX2-OT-210ENST00000487240 FAM117AQ9C073 453 aa9.26□□□□□ -0.93
SOX2-OT-210ENST00000487240 FAM198AQ9UFP1 575 aa9.26□□□□□ -0.93
SOX2-OT-210ENST00000487240 ATP7BP35670 1465 aa9.26□□□□□ -0.93
SOX2-OT-210ENST00000487240 BCL9LQ86UU0 1499 aa9.26□□□□□ -0.93
SOX2-OT-210ENST00000487240 EMP3P54852 163 aa9.25□□□□□ -0.93
SOX2-OT-210ENST00000487240 REPIN1Q9BWE0 567 aaKnown RBP9.25□□□□□ -0.93
SOX2-OT-210ENST00000487240 GPCPD1Q9NPB8 672 aa9.25□□□□□ -0.93
SOX2-OT-210ENST00000487240 TSKSQ9UJT2 592 aa9.25□□□□□ -0.93
SOX2-OT-210ENST00000487240 CENPJQ9HC77 1338 aaPredicted RBP9.25□□□□□ -0.93
SOX2-OT-210ENST00000487240 ABCA3Q99758 1704 aa9.25□□□□□ -0.93
SOX2-OT-210ENST00000487240 TRPM3Q9HCF6 1732 aaPredicted RBP9.25□□□□□ -0.93
SOX2-OT-210ENST00000487240 TRIM6-TRIM34B2RNG4 842 aa9.24□□□□□ -0.93
SOX2-OT-210ENST00000487240 SRPK2P78362 688 aaKnown RBP9.24□□□□□ -0.93
SOX2-OT-210ENST00000487240 UNC5CLQ8IV45 518 aa9.24□□□□□ -0.93
SOX2-OT-210ENST00000487240 TMUB1Q9BVT8 246 aa9.24□□□□□ -0.93
SOX2-OT-210ENST00000487240 ITSN1Q15811 1721 aa9.24□□□□□ -0.93
SOX2-OT-210ENST00000487240 SLIT2O94813 1529 aa9.23□□□□□ -0.93
SOX2-OT-210ENST00000487240 NBPF26B4DH59 902 aa9.23□□□□□ -0.93
SOX2-OT-210ENST00000487240 NUTM2GQ5VZR2 741 aa9.23□□□□□ -0.93
SOX2-OT-210ENST00000487240 MARVELD3Q96A59 401 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms