RNA–Protein interactions for RNA: ENST00000487239.5

CAD-209, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 3

Gene CAD, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-209ENST00000487239 TATP17735 454 aaPredicted RBP19.31■□□□□ 0.68
CAD-209ENST00000487239 SYT17Q9BSW7 474 aa19.31■□□□□ 0.68
CAD-209ENST00000487239 TIMELESSQ9UNS1 1208 aa19.31■□□□□ 0.68
CAD-209ENST00000487239 SMG6Q86US8 1419 aaKnown RBP19.31■□□□□ 0.68
CAD-209ENST00000487239 CASZ1Q86V15 1759 aa19.3■□□□□ 0.68
CAD-209ENST00000487239 PPM1GO15355 546 aaPredicted RBP19.3■□□□□ 0.68
CAD-209ENST00000487239 AKT1S1Q96B36 256 aa19.3■□□□□ 0.68
CAD-209ENST00000487239 ARXQ96QS3 562 aa19.3■□□□□ 0.68
CAD-209ENST00000487239 TFCP2L1Q9NZI6 479 aa19.3■□□□□ 0.68
CAD-209ENST00000487239 MEGF6O75095 1541 aa19.3■□□□□ 0.68
CAD-209ENST00000487239 SGIP1Q9BQI5 828 aa19.29■□□□□ 0.68
CAD-209ENST00000487239 CGNL1Q0VF96 1302 aa19.28■□□□□ 0.68
CAD-209ENST00000487239 CCNL1Q9UK58 526 aaPredicted RBP19.28■□□□□ 0.68
CAD-209ENST00000487239 EMILIN1Q9Y6C2 1016 aa19.28■□□□□ 0.68
CAD-209ENST00000487239 INSRP06213 1382 aa19.28■□□□□ 0.68
CAD-209ENST00000487239 NSD3Q9BZ95 1437 aa19.27■□□□□ 0.68
CAD-209ENST00000487239 UTRNP46939 3433 aa19.27■□□□□ 0.68
CAD-209ENST00000487239 FLT4P35916 1363 aa19.27■□□□□ 0.68
CAD-209ENST00000487239 KLHL34Q8N239 644 aa19.26■□□□□ 0.67
CAD-209ENST00000487239 BTAF1O14981 1849 aa19.25■□□□□ 0.67
CAD-209ENST00000487239 PNPLA7Q6ZV29 1317 aa19.25■□□□□ 0.67
CAD-209ENST00000487239 NSD2O96028 1365 aa19.24■□□□□ 0.67
CAD-209ENST00000487239 MSH5O43196 834 aa19.24■□□□□ 0.67
CAD-209ENST00000487239 POLD1P28340 1107 aa19.24■□□□□ 0.67
CAD-209ENST00000487239 SLC16A10Q8TF71 515 aa19.24■□□□□ 0.67
CAD-209ENST00000487239 KAT6BQ8WYB5 2073 aa19.23■□□□□ 0.67
CAD-209ENST00000487239 MPRIPQ6WCQ1 1025 aa19.23■□□□□ 0.67
CAD-209ENST00000487239 MYOM1P52179 1685 aa19.23■□□□□ 0.67
CAD-209ENST00000487239 FAM208AQ9UK61 1670 aaKnown RBP19.23■□□□□ 0.67
CAD-209ENST00000487239 PCDH11XQ9BZA7 1347 aa19.23■□□□□ 0.67
CAD-209ENST00000487239 PCDH11YQ9BZA8 1340 aa19.23■□□□□ 0.67
CAD-209ENST00000487239 KIF24Q5T7B8 1368 aa19.22■□□□□ 0.67
CAD-209ENST00000487239 CLSPNQ9HAW4 1339 aa19.22■□□□□ 0.67
CAD-209ENST00000487239 CYP27B1O15528 508 aa19.21■□□□□ 0.67
CAD-209ENST00000487239 TNNT2P45379 298 aaPredicted RBP19.21■□□□□ 0.67
CAD-209ENST00000487239 PAPPAQ13219 1627 aa19.21■□□□□ 0.67
CAD-209ENST00000487239 GPR162Q16538 588 aa19.18■□□□□ 0.66
CAD-209ENST00000487239 WASHC2AQ641Q2 1341 aa19.18■□□□□ 0.66
CAD-209ENST00000487239 EIF4G2P78344 907 aaKnown RBP eCLIP19.17■□□□□ 0.66
CAD-209ENST00000487239 COL23A1Q86Y22 540 aaPredicted RBP19.17■□□□□ 0.66
CAD-209ENST00000487239 PELP1Q8IZL8 1130 aaKnown RBP19.17■□□□□ 0.66
CAD-209ENST00000487239 POLKQ9UBT6 870 aa19.17■□□□□ 0.66
CAD-209ENST00000487239 SPG7Q9UQ90 795 aa19.17■□□□□ 0.66
CAD-209ENST00000487239 RGPD2P0DJD1 1756 aa19.16■□□□□ 0.66
CAD-209ENST00000487239 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
CAD-209ENST00000487239 EYA1Q99502 592 aa19.16■□□□□ 0.66
CAD-209ENST00000487239 HSPA5P11021 654 aaKnown RBP19.15■□□□□ 0.66
CAD-209ENST00000487239 MSL1Q68DK7 614 aa19.15■□□□□ 0.66
CAD-209ENST00000487239 PALLDQ8WX93 1383 aa19.15■□□□□ 0.66
CAD-209ENST00000487239 DOT1LQ8TEK3 1739 aa19.14■□□□□ 0.66
CAD-209ENST00000487239 PIGBQ92521 554 aa19.14■□□□□ 0.65
CAD-209ENST00000487239 SMARCC1Q92922 1105 aaPredicted RBP19.14■□□□□ 0.65
CAD-209ENST00000487239 MAP3K5Q99683 1374 aa19.14■□□□□ 0.65
CAD-209ENST00000487239 PANK3Q9H999 370 aa19.13■□□□□ 0.65
CAD-209ENST00000487239 HMGB2P26583 209 aaKnown RBP19.12■□□□□ 0.65
CAD-209ENST00000487239 ZNF784Q8NCA9 323 aaPredicted RBP19.12■□□□□ 0.65
CAD-209ENST00000487239 NLGN2Q8NFZ4 835 aa19.12■□□□□ 0.65
CAD-209ENST00000487239 KIF20BQ96Q89 1820 aa19.11■□□□□ 0.65
CAD-209ENST00000487239 EIF4A2Q14240 407 aaKnown RBP19.11■□□□□ 0.65
CAD-209ENST00000487239 NKX1-1Q15270 411 aaPredicted RBP19.11■□□□□ 0.65
CAD-209ENST00000487239 AK7Q96M32 723 aa19.11■□□□□ 0.65
CAD-209ENST00000487239 SHANK3Q9BYB0 1731 aa19.11■□□□□ 0.65
CAD-209ENST00000487239 GOLGB1Q14789 3259 aaKnown RBP19.1■□□□□ 0.65
CAD-209ENST00000487239 FLAD1Q8NFF5 587 aa19.1■□□□□ 0.65
CAD-209ENST00000487239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.1■□□□□ 0.653e-6■■□□□ 13.5
CAD-209ENST00000487239 TMOD3Q9NYL9 352 aa19.1■□□□□ 0.65
CAD-209ENST00000487239 IFNL2Q8IZJ0 200 aa19.09■□□□□ 0.65
CAD-209ENST00000487239 PHF14O94880 888 aa19.08■□□□□ 0.64
CAD-209ENST00000487239 PHKG2P15735 406 aa19.08■□□□□ 0.64
CAD-209ENST00000487239 SMIM5Q71RC9 77 aa19.08■□□□□ 0.64
CAD-209ENST00000487239 ASAP1Q9ULH1 1129 aa19.07■□□□□ 0.64
CAD-209ENST00000487239 LOC102724428A0A0B4J2F2 783 aa19.06■□□□□ 0.64
CAD-209ENST00000487239 SIK1P57059 783 aa19.06■□□□□ 0.64
CAD-209ENST00000487239 MORC1Q86VD1 984 aa19.06■□□□□ 0.64
CAD-209ENST00000487239 NCAPD2Q15021 1401 aa19.06■□□□□ 0.64
CAD-209ENST00000487239 LY75O60449 1722 aa19.05■□□□□ 0.64
CAD-209ENST00000487239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.04■□□□□ 0.64
CAD-209ENST00000487239 ATP6V1AP38606 617 aa19.04■□□□□ 0.64
CAD-209ENST00000487239 AMIGO3Q86WK7 504 aa19.04■□□□□ 0.64
CAD-209ENST00000487239 LINC00116Q8NCU8 138 aa19.04■□□□□ 0.64
CAD-209ENST00000487239 KNSTRNQ9Y448 316 aa19.03■□□□□ 0.64
CAD-209ENST00000487239 PLEKHO1Q53GL0 409 aaPredicted RBP19.02■□□□□ 0.64
CAD-209ENST00000487239 ATG3Q9NT62 314 aa19.02■□□□□ 0.64
CAD-209ENST00000487239 IGSF1Q8N6C5 1336 aa19.01■□□□□ 0.63
CAD-209ENST00000487239 GNPATO15228 680 aa19.01■□□□□ 0.63
CAD-209ENST00000487239 GRIN3BO60391 1043 aa19.01■□□□□ 0.63
CAD-209ENST00000487239 YBX3P16989 372 aaKnown RBP eCLIP19.01■□□□□ 0.63
CAD-209ENST00000487239 ITPK1Q13572 414 aa19.01■□□□□ 0.63
CAD-209ENST00000487239 CD2APQ9Y5K6 639 aa19.01■□□□□ 0.63
CAD-209ENST00000487239 QSER1Q2KHR3 1735 aa19■□□□□ 0.63
CAD-209ENST00000487239 SSFA2P28290 1259 aa19■□□□□ 0.63
CAD-209ENST00000487239 RBM42Q9BTD8 480 aaKnown RBP19■□□□□ 0.63
CAD-209ENST00000487239 HSP90AB1P08238 724 aaKnown RBP18.99■□□□□ 0.63
CAD-209ENST00000487239 ZNF530Q6P9A1 599 aaPredicted RBP18.99■□□□□ 0.63
CAD-209ENST00000487239 DCAF5Q96JK2 942 aa18.99■□□□□ 0.63
CAD-209ENST00000487239 TUBGCP6Q96RT7 1819 aa18.98■□□□□ 0.63
CAD-209ENST00000487239 ERVV-2B6SEH9 535 aa18.98■□□□□ 0.63
CAD-209ENST00000487239 AEBP1Q8IUX7 1158 aa18.98■□□□□ 0.63
CAD-209ENST00000487239 PKD1L3Q7Z443 1732 aa18.97■□□□□ 0.63
CAD-209ENST00000487239 TOGARAM1Q9Y4F4 1720 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms