RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 ABCC11Q96J66 1382 aa17.38■□□□□ 0.37
EPHB4-206ENST00000487222 PPFIBP1Q86W92 1011 aa17.38■□□□□ 0.37
EPHB4-206ENST00000487222 RBM42Q9BTD8 480 aaKnown RBP17.38■□□□□ 0.37
EPHB4-206ENST00000487222 DCTN1Q14203 1278 aa17.38■□□□□ 0.37
EPHB4-206ENST00000487222 NUDT16Q96DE0 195 aaKnown RBP17.38■□□□□ 0.37
EPHB4-206ENST00000487222 GNL3LQ9NVN8 582 aaKnown RBP17.38■□□□□ 0.37
EPHB4-206ENST00000487222 CBFA2T2O43439 604 aa17.38■□□□□ 0.37
EPHB4-206ENST00000487222 ZSCAN25Q6NSZ9 544 aa17.38■□□□□ 0.37
EPHB4-206ENST00000487222 C20orf194Q5TEA3 1177 aa17.38■□□□□ 0.37
EPHB4-206ENST00000487222 STRN4Q9NRL3 753 aa17.38■□□□□ 0.37
EPHB4-206ENST00000487222 CTNNA3Q9UI47 895 aa17.38■□□□□ 0.37
EPHB4-206ENST00000487222 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
EPHB4-206ENST00000487222 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
EPHB4-206ENST00000487222 UQCRHLA0A096LP55 91 aa17.37■□□□□ 0.37
EPHB4-206ENST00000487222 UQCRHP07919 91 aa17.37■□□□□ 0.37
EPHB4-206ENST00000487222 SSH1Q8WYL5 1049 aa17.37■□□□□ 0.37
EPHB4-206ENST00000487222 SPG7Q9UQ90 795 aa17.37■□□□□ 0.37
EPHB4-206ENST00000487222 FAM177BA6PVY3 158 aa17.37■□□□□ 0.37
EPHB4-206ENST00000487222 H0YHG0 523 aa17.37■□□□□ 0.37
EPHB4-206ENST00000487222 PKNOX2Q96KN3 472 aa17.37■□□□□ 0.37
EPHB4-206ENST00000487222 CDKL5O76039 1030 aa17.36■□□□□ 0.37
EPHB4-206ENST00000487222 CD109Q6YHK3 1445 aa17.36■□□□□ 0.37
EPHB4-206ENST00000487222 CABP4P57796 275 aa17.36■□□□□ 0.37
EPHB4-206ENST00000487222 CCAR1Q8IX12 1150 aaKnown RBP17.36■□□□□ 0.37
EPHB4-206ENST00000487222 EXOC6BQ9Y2D4 811 aa17.36■□□□□ 0.37
EPHB4-206ENST00000487222 NCOA1Q15788 1441 aa17.35■□□□□ 0.37
EPHB4-206ENST00000487222 STIM1Q13586 685 aa17.35■□□□□ 0.37
EPHB4-206ENST00000487222 LEKR1Q6ZMV7 388 aa17.35■□□□□ 0.37
EPHB4-206ENST00000487222 CCDC69A6NI79 296 aa17.35■□□□□ 0.37
EPHB4-206ENST00000487222 CCDC57Q2TAC2 916 aa17.35■□□□□ 0.37
EPHB4-206ENST00000487222 SAMD1Q6SPF0 538 aaPredicted RBP17.35■□□□□ 0.37
EPHB4-206ENST00000487222 TOM1L2Q6ZVM7 507 aa17.35■□□□□ 0.37
EPHB4-206ENST00000487222 HSP90AB2PQ58FF8 381 aa17.35■□□□□ 0.37
EPHB4-206ENST00000487222 SYCE3A1L190 88 aa17.34■□□□□ 0.37
EPHB4-206ENST00000487222 MX1P20591 662 aa17.34■□□□□ 0.37
EPHB4-206ENST00000487222 MAP3K11Q16584 847 aa17.34■□□□□ 0.37
EPHB4-206ENST00000487222 KIF1BPQ96EK5 621 aa17.34■□□□□ 0.37
EPHB4-206ENST00000487222 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
EPHB4-206ENST00000487222 IKQ13123 557 aaPredicted RBP17.34■□□□□ 0.37
EPHB4-206ENST00000487222 KIF14Q15058 1648 aa17.33■□□□□ 0.37
EPHB4-206ENST00000487222 LRPPRCP42704 1394 aaKnown RBP17.33■□□□□ 0.37
EPHB4-206ENST00000487222 UPF3BQ9BZI7 483 aaKnown RBP17.33■□□□□ 0.37
EPHB4-206ENST00000487222 LUC7LQ9NQ29 371 aaKnown RBP17.33■□□□□ 0.37
EPHB4-206ENST00000487222 RRP9O43818 475 aaKnown RBP17.33■□□□□ 0.36
EPHB4-206ENST00000487222 GLRX3O76003 335 aaKnown RBP17.33■□□□□ 0.36
EPHB4-206ENST00000487222 MYL6BP14649 208 aa17.33■□□□□ 0.36
EPHB4-206ENST00000487222 AXDND1Q5T1B0 1012 aaPredicted RBP17.33■□□□□ 0.36
EPHB4-206ENST00000487222 BTBD11A6QL63 1104 aa17.32■□□□□ 0.36
EPHB4-206ENST00000487222 CASTP20810 708 aaKnown RBP17.32■□□□□ 0.36
EPHB4-206ENST00000487222 NOL7Q9UMY1 257 aaKnown RBP17.32■□□□□ 0.36
EPHB4-206ENST00000487222 RAB11FIP3O75154 756 aa17.32■□□□□ 0.36
EPHB4-206ENST00000487222 ERLIN1O75477 346 aa17.32■□□□□ 0.36
EPHB4-206ENST00000487222 ZFYVE27Q5T4F4 411 aa17.32■□□□□ 0.36
EPHB4-206ENST00000487222 FILIP1Q7Z7B0 1213 aa17.32■□□□□ 0.36
EPHB4-206ENST00000487222 FKBP4Q02790 459 aaKnown RBP eCLIP17.32■□□□□ 0.36
EPHB4-206ENST00000487222 DUSP27Q5VZP5 1158 aa17.32■□□□□ 0.36
EPHB4-206ENST00000487222 ADGRL1O94910 1474 aa17.32■□□□□ 0.36
EPHB4-206ENST00000487222 RDXP35241 583 aaKnown RBP17.32■□□□□ 0.36
EPHB4-206ENST00000487222 PRDM11Q9NQV5 511 aa17.32■□□□□ 0.36
EPHB4-206ENST00000487222 THUMPD2Q9BTF0 503 aaKnown RBP17.31■□□□□ 0.36
EPHB4-206ENST00000487222 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
EPHB4-206ENST00000487222 KRT18P05783 430 aaKnown RBP17.31■□□□□ 0.36
EPHB4-206ENST00000487222 NUTM1Q86Y26 1132 aa17.31■□□□□ 0.36
EPHB4-206ENST00000487222 SMTNL1A8MU46 457 aa17.31■□□□□ 0.36
EPHB4-206ENST00000487222 PRKCSHP14314 528 aaPredicted RBP17.31■□□□□ 0.36
EPHB4-206ENST00000487222 DDX54Q8TDD1 881 aaKnown RBP17.31■□□□□ 0.36
EPHB4-206ENST00000487222 TXLNBQ8N3L3 684 aa17.3■□□□□ 0.36
EPHB4-206ENST00000487222 TBC1D2Q9BYX2 928 aa17.3■□□□□ 0.36
EPHB4-206ENST00000487222 WAPLQ7Z5K2 1190 aa17.3■□□□□ 0.36
EPHB4-206ENST00000487222 SKAP1Q86WV1 359 aa17.29■□□□□ 0.36
EPHB4-206ENST00000487222 NUP133Q8WUM0 1156 aa17.29■□□□□ 0.36
EPHB4-206ENST00000487222 KCNH5Q8NCM2 988 aa17.29■□□□□ 0.36
EPHB4-206ENST00000487222 CCDC191Q8NCU4 936 aa17.29■□□□□ 0.36
EPHB4-206ENST00000487222 MPHOSPH8Q99549 860 aa17.29■□□□□ 0.36
EPHB4-206ENST00000487222 EIF3JO75822 258 aaKnown RBP17.29■□□□□ 0.36
EPHB4-206ENST00000487222 SCAND2PQ9GZW5 306 aaPredicted RBP17.28■□□□□ 0.36
EPHB4-206ENST00000487222 DEF6Q9H4E7 631 aa17.28■□□□□ 0.36
EPHB4-206ENST00000487222 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
EPHB4-206ENST00000487222 WASF1Q92558 559 aa17.28■□□□□ 0.36
EPHB4-206ENST00000487222 SH2B1Q9NRF2 756 aaPredicted RBP17.28■□□□□ 0.36
EPHB4-206ENST00000487222 PLEKHH1Q9ULM0 1364 aa17.28■□□□□ 0.36
EPHB4-206ENST00000487222 FAM177A1Q8N128 213 aaPredicted RBP17.28■□□□□ 0.36
EPHB4-206ENST00000487222 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
EPHB4-206ENST00000487222 CCDC83Q8IWF9 413 aa17.27■□□□□ 0.36
EPHB4-206ENST00000487222 CCDC183Q5T5S1 534 aa17.27■□□□□ 0.36
EPHB4-206ENST00000487222 FERMT3Q86UX7 667 aa17.27■□□□□ 0.36
EPHB4-206ENST00000487222 UBAC1Q9BSL1 405 aa17.27■□□□□ 0.36
EPHB4-206ENST00000487222 KIF2AO00139 706 aaPredicted RBP17.27■□□□□ 0.36
EPHB4-206ENST00000487222 SYCP1Q15431 976 aa17.27■□□□□ 0.36
EPHB4-206ENST00000487222 MCM10Q7L590 875 aa17.27■□□□□ 0.36
EPHB4-206ENST00000487222 TSPYL1Q9H0U9 437 aa17.27■□□□□ 0.36
EPHB4-206ENST00000487222 SMARCA5O60264 1052 aaPredicted RBP17.27■□□□□ 0.35
EPHB4-206ENST00000487222 RPRD2Q5VT52 1461 aaKnown RBP17.27■□□□□ 0.35
EPHB4-206ENST00000487222 ERLIN2O94905 339 aa17.26■□□□□ 0.35
EPHB4-206ENST00000487222 IMMTQ16891 758 aaKnown RBP17.26■□□□□ 0.35
EPHB4-206ENST00000487222 CCDC181Q5TID7 509 aa17.26■□□□□ 0.35
EPHB4-206ENST00000487222 DDX11Q96FC9 970 aa17.26■□□□□ 0.35
EPHB4-206ENST00000487222 PDCL2Q8N4E4 241 aa17.26■□□□□ 0.35
EPHB4-206ENST00000487222 SOGA3Q5TF21 947 aa17.26■□□□□ 0.35
EPHB4-206ENST00000487222 PRPF40BQ6NWY9 871 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms