RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 CNGB1Q14028 1251 aaPredicted RBP30.52■■■□□ 2.48
CDHR3-212ENST00000487084 EIF4A2Q14240 407 aaKnown RBP30.51■■■□□ 2.47
CDHR3-212ENST00000487084 PSDA5PKW4 1024 aaPredicted RBP30.5■■■□□ 2.47
CDHR3-212ENST00000487084 EYA1Q99502 592 aa30.5■■■□□ 2.47
CDHR3-212ENST00000487084 PLSCR1O15162 318 aa30.47■■■□□ 2.47
CDHR3-212ENST00000487084 NHSQ6T4R5 1651 aa30.46■■■□□ 2.47
CDHR3-212ENST00000487084 RREB1Q92766 1687 aa30.46■■■□□ 2.47
CDHR3-212ENST00000487084 R3HDM1Q15032 1099 aaKnown RBP30.45■■■□□ 2.47
CDHR3-212ENST00000487084 NCAPD2Q15021 1401 aa30.45■■■□□ 2.46
CDHR3-212ENST00000487084 SHANK3Q9BYB0 1731 aa30.44■■■□□ 2.46
CDHR3-212ENST00000487084 SYTL4Q96C24 671 aaPredicted RBP30.43■■■□□ 2.46
CDHR3-212ENST00000487084 PCDH11XQ9BZA7 1347 aa30.43■■■□□ 2.46
CDHR3-212ENST00000487084 PCDH11YQ9BZA8 1340 aa30.43■■■□□ 2.46
CDHR3-212ENST00000487084 NUP188Q5SRE5 1749 aa30.42■■■□□ 2.46
CDHR3-212ENST00000487084 NBPF14Q5TI25 921 aa30.42■■■□□ 2.46
CDHR3-212ENST00000487084 KAT6BQ8WYB5 2073 aa30.42■■■□□ 2.46
CDHR3-212ENST00000487084 RGPD3A6NKT7 1758 aaPredicted RBP30.41■■■□□ 2.46
CDHR3-212ENST00000487084 RGPD4Q7Z3J3 1758 aa30.41■■■□□ 2.46
CDHR3-212ENST00000487084 NPC1L1Q9UHC9 1359 aa30.39■■■□□ 2.45
CDHR3-212ENST00000487084 PRIM1P49642 420 aaKnown RBP30.38■■■□□ 2.45
CDHR3-212ENST00000487084 IGSF1Q8N6C5 1336 aa30.38■■■□□ 2.45
CDHR3-212ENST00000487084 DOT1LQ8TEK3 1739 aa30.37■■■□□ 2.45
CDHR3-212ENST00000487084 MTHFSP49914 203 aa30.37■■■□□ 2.45
CDHR3-212ENST00000487084 TXNRD1Q16881 649 aa30.37■■■□□ 2.45
CDHR3-212ENST00000487084 SPG7Q9UQ90 795 aa30.37■■■□□ 2.45
CDHR3-212ENST00000487084 PROM2Q8N271 834 aa30.36■■■□□ 2.45
CDHR3-212ENST00000487084 BTAF1O14981 1849 aa30.36■■■□□ 2.45
CDHR3-212ENST00000487084 CYP27B1O15528 508 aa30.35■■■□□ 2.45
CDHR3-212ENST00000487084 PKD1L3Q7Z443 1732 aa30.33■■■□□ 2.45
CDHR3-212ENST00000487084 IL13P35225 146 aa30.31■■■□□ 2.44
CDHR3-212ENST00000487084 AEBP1Q8IUX7 1158 aa30.3■■■□□ 2.44
CDHR3-212ENST00000487084 ANO8Q9HCE9 1232 aaPredicted RBP30.3■■■□□ 2.44
CDHR3-212ENST00000487084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.29■■■□□ 2.44
CDHR3-212ENST00000487084 SULT6B1Q6IMI4 303 aa30.28■■■□□ 2.44
CDHR3-212ENST00000487084 IFNL2Q8IZJ0 200 aa30.25■■■□□ 2.43
CDHR3-212ENST00000487084 STK32BQ9NY57 414 aa30.25■■■□□ 2.43
CDHR3-212ENST00000487084 SRCAPQ6ZRS2 3230 aa30.24■■■□□ 2.43
CDHR3-212ENST00000487084 DIAPH1O60610 1272 aaKnown RBP30.24■■■□□ 2.43
CDHR3-212ENST00000487084 PHKG2P15735 406 aa30.24■■■□□ 2.43
CDHR3-212ENST00000487084 PLEKHO1Q53GL0 409 aaPredicted RBP30.24■■■□□ 2.43
CDHR3-212ENST00000487084 MPRIPQ6WCQ1 1025 aa30.24■■■□□ 2.43
CDHR3-212ENST00000487084 NKX1-1Q15270 411 aaPredicted RBP30.22■■■□□ 2.43
CDHR3-212ENST00000487084 PLEKHG2Q9H7P9 1386 aa30.22■■■□□ 2.43
CDHR3-212ENST00000487084 TOGARAM1Q9Y4F4 1720 aa30.2■■■□□ 2.43
CDHR3-212ENST00000487084 AMOTQ4VCS5 1084 aa30.2■■■□□ 2.43
CDHR3-212ENST00000487084 ZNF530Q6P9A1 599 aaPredicted RBP30.2■■■□□ 2.43
CDHR3-212ENST00000487084 LRRC4BQ9NT99 713 aa30.2■■■□□ 2.43
CDHR3-212ENST00000487084 KDRP35968 1356 aa30.19■■■□□ 2.42
CDHR3-212ENST00000487084 HMOX1P09601 288 aa30.19■■■□□ 2.42
CDHR3-212ENST00000487084 SLC27A3Q5K4L6 730 aa30.19■■■□□ 2.42
CDHR3-212ENST00000487084 KCNQ4P56696 695 aa30.18■■■□□ 2.42
CDHR3-212ENST00000487084 SLC15A2Q16348 729 aa30.18■■■□□ 2.42
CDHR3-212ENST00000487084 CCNL1Q9UK58 526 aaPredicted RBP30.17■■■□□ 2.42
CDHR3-212ENST00000487084 LRP5O75197 1615 aa30.16■■■□□ 2.42
CDHR3-212ENST00000487084 U2SURPO15042 1029 aaKnown RBP30.16■■■□□ 2.42
CDHR3-212ENST00000487084 ZEB1P37275 1124 aaPredicted RBP30.16■■■□□ 2.42
CDHR3-212ENST00000487084 CFAP53Q96M91 514 aa30.16■■■□□ 2.42
CDHR3-212ENST00000487084 COL3A1P02461 1466 aaPredicted RBP30.16■■■□□ 2.42
CDHR3-212ENST00000487084 PPP2R1AP30153 589 aa30.15■■■□□ 2.42
CDHR3-212ENST00000487084 C1orf141Q5JVX7 400 aa30.15■■■□□ 2.42
CDHR3-212ENST00000487084 PIGBQ92521 554 aa30.15■■■□□ 2.42
CDHR3-212ENST00000487084 TMOD3Q9NYL9 352 aa30.15■■■□□ 2.42
CDHR3-212ENST00000487084 PALLDQ8WX93 1383 aa30.15■■■□□ 2.42
CDHR3-212ENST00000487084 HSP90AB1P08238 724 aaKnown RBP30.14■■■□□ 2.42
CDHR3-212ENST00000487084 PAPPAQ13219 1627 aa30.14■■■□□ 2.41
CDHR3-212ENST00000487084 ZNF827Q17R98 1081 aa30.12■■■□□ 2.41
CDHR3-212ENST00000487084 ITGB4P16144 1822 aa30.12■■■□□ 2.41
CDHR3-212ENST00000487084 LY75O60449 1722 aa30.11■■■□□ 2.41
CDHR3-212ENST00000487084 DCAF5Q96JK2 942 aa30.11■■■□□ 2.41
CDHR3-212ENST00000487084 PDGFDQ9GZP0 370 aaPredicted RBP30.11■■■□□ 2.41
CDHR3-212ENST00000487084 DDX10Q13206 875 aaKnown RBP30.1■■■□□ 2.41
CDHR3-212ENST00000487084 SMARCC1Q92922 1105 aaPredicted RBP30.1■■■□□ 2.41
CDHR3-212ENST00000487084 KDM6AO15550 1401 aaPredicted RBP30.07■■■□□ 2.4
CDHR3-212ENST00000487084 AKT1S1Q96B36 256 aa30.07■■■□□ 2.4
CDHR3-212ENST00000487084 SPON1Q9HCB6 807 aa30.07■■■□□ 2.4
CDHR3-212ENST00000487084 ZBTB7AO95365 584 aa30.06■■■□□ 2.4
CDHR3-212ENST00000487084 CASZ1Q86V15 1759 aa30.05■■■□□ 2.4
CDHR3-212ENST00000487084 ERVV-2B6SEH9 535 aa30.05■■■□□ 2.4
CDHR3-212ENST00000487084 CABP4P57796 275 aa30.04■■■□□ 2.4
CDHR3-212ENST00000487084 TFCP2L1Q9NZI6 479 aa30.04■■■□□ 2.4
CDHR3-212ENST00000487084 ASAP1Q9ULH1 1129 aa30.04■■■□□ 2.4
CDHR3-212ENST00000487084 NUDCQ9Y266 331 aa30.04■■■□□ 2.4
CDHR3-212ENST00000487084 AKAP4Q5JQC9 854 aa30.03■■■□□ 2.4
CDHR3-212ENST00000487084 MTHFSDQ2M296 383 aaKnown RBP30.01■■■□□ 2.39
CDHR3-212ENST00000487084 ATG3Q9NT62 314 aa30■■■□□ 2.39
CDHR3-212ENST00000487084 PPP1R1BQ9UD71 204 aaPredicted RBP30■■■□□ 2.39
CDHR3-212ENST00000487084 ATF5Q9Y2D1 282 aaPredicted RBP30■■■□□ 2.39
CDHR3-212ENST00000487084 LOC102724428A0A0B4J2F2 783 aa29.99■■■□□ 2.39
CDHR3-212ENST00000487084 U2AF1L5P0DN76 240 aaPredicted RBP29.99■■■□□ 2.39
CDHR3-212ENST00000487084 SIK1P57059 783 aa29.99■■■□□ 2.39
CDHR3-212ENST00000487084 U2AF1Q01081 240 aaKnown RBP eCLIP29.99■■■□□ 2.39
CDHR3-212ENST00000487084 C5P01031 1676 aa29.97■■■□□ 2.39
CDHR3-212ENST00000487084 PNPLA7Q6ZV29 1317 aa29.96■■■□□ 2.39
CDHR3-212ENST00000487084 HMGB2P26583 209 aaKnown RBP29.96■■■□□ 2.39
CDHR3-212ENST00000487084 PRKAR2BP31323 418 aa29.96■■■□□ 2.39
CDHR3-212ENST00000487084 MTFR1LQ9H019 292 aa29.96■■■□□ 2.39
CDHR3-212ENST00000487084 NFATC2IPQ8NCF5 419 aa29.95■■■□□ 2.39
CDHR3-212ENST00000487084 RBM42Q9BTD8 480 aaKnown RBP29.95■■■□□ 2.39
CDHR3-212ENST00000487084 ATP6V1AP38606 617 aa29.94■■■□□ 2.38
CDHR3-212ENST00000487084 RSPH6AQ9H0K4 717 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms