RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 DDX54Q8TDD1 881 aaKnown RBP10.96□□□□□ -0.65
PDPN-205ENST00000487038 CCNL1Q9UK58 526 aaPredicted RBP10.96□□□□□ -0.65
PDPN-205ENST00000487038 UBR3Q6ZT12 1888 aa10.95□□□□□ -0.66
PDPN-205ENST00000487038 C4BP0C0L5 1744 aa10.95□□□□□ -0.66
PDPN-205ENST00000487038 WDR90Q96KV7 1748 aa10.95□□□□□ -0.66
PDPN-205ENST00000487038 CICQ96RK0 1608 aaPredicted RBP10.95□□□□□ -0.66
PDPN-205ENST00000487038 EDC4Q6P2E9 1401 aaKnown RBP10.95□□□□□ -0.66
PDPN-205ENST00000487038 ROCK2O75116 1388 aaKnown RBP10.95□□□□□ -0.66
PDPN-205ENST00000487038 CD2APQ9Y5K6 639 aa10.95□□□□□ -0.66
PDPN-205ENST00000487038 ITGB4P16144 1822 aa10.95□□□□□ -0.66
PDPN-205ENST00000487038 NSD2O96028 1365 aa10.94□□□□□ -0.66
PDPN-205ENST00000487038 FLAD1Q8NFF5 587 aa10.94□□□□□ -0.66
PDPN-205ENST00000487038 ZNF526Q8TF50 670 aaPredicted RBP10.94□□□□□ -0.66
PDPN-205ENST00000487038 CD163L1Q9NR16 1453 aa10.93□□□□□ -0.66
PDPN-205ENST00000487038 NSD3Q9BZ95 1437 aa10.93□□□□□ -0.66
PDPN-205ENST00000487038 SBNO2Q9Y2G9 1366 aa10.93□□□□□ -0.66
PDPN-205ENST00000487038 TOGARAM1Q9Y4F4 1720 aa10.93□□□□□ -0.66
PDPN-205ENST00000487038 HDGFL2Q7Z4V5 671 aaPredicted RBP10.93□□□□□ -0.66
PDPN-205ENST00000487038 KIF13BQ9NQT8 1826 aa10.93□□□□□ -0.66
PDPN-205ENST00000487038 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
PDPN-205ENST00000487038 KCNQ4P56696 695 aa10.92□□□□□ -0.66
PDPN-205ENST00000487038 MSL1Q68DK7 614 aa10.92□□□□□ -0.66
PDPN-205ENST00000487038 NME9Q86XW9 330 aa10.92□□□□□ -0.66
PDPN-205ENST00000487038 COL23A1Q86Y22 540 aaPredicted RBP10.92□□□□□ -0.66
PDPN-205ENST00000487038 MEGF6O75095 1541 aa10.91□□□□□ -0.66
PDPN-205ENST00000487038 APLP1P51693 650 aa10.91□□□□□ -0.66
PDPN-205ENST00000487038 IP6K1Q92551 441 aa10.91□□□□□ -0.66
PDPN-205ENST00000487038 SMG6Q86US8 1419 aaKnown RBP10.91□□□□□ -0.66
PDPN-205ENST00000487038 ZCRB1Q8TBF4 217 aaKnown RBP10.9□□□□□ -0.66
PDPN-205ENST00000487038 LTV1Q96GA3 475 aaPredicted RBP10.9□□□□□ -0.66
PDPN-205ENST00000487038 PKD1L3Q7Z443 1732 aa10.89□□□□□ -0.67
PDPN-205ENST00000487038 CGNL1Q0VF96 1302 aa10.89□□□□□ -0.67
PDPN-205ENST00000487038 IGSF1Q8N6C5 1336 aa10.89□□□□□ -0.67
PDPN-205ENST00000487038 KIF20BQ96Q89 1820 aa10.89□□□□□ -0.67
PDPN-205ENST00000487038 TMC1Q8TDI8 760 aa10.89□□□□□ -0.67
PDPN-205ENST00000487038 TERF2IPQ9NYB0 399 aa10.89□□□□□ -0.67
PDPN-205ENST00000487038 N4BP2Q86UW6 1770 aaPredicted RBP10.89□□□□□ -0.67
PDPN-205ENST00000487038 KIAA1551Q9HCM1 1747 aa10.89□□□□□ -0.67
PDPN-205ENST00000487038 A0A1W2PP64 1363 aa10.89□□□□□ -0.67
PDPN-205ENST00000487038 RTL1A6NKG5 1358 aa10.89□□□□□ -0.67
PDPN-205ENST00000487038 BRCA1P38398 1863 aaKnown RBP10.88□□□□□ -0.67
PDPN-205ENST00000487038 AK7Q96M32 723 aa10.88□□□□□ -0.67
PDPN-205ENST00000487038 ARFGEF1Q9Y6D6 1849 aa10.88□□□□□ -0.67
PDPN-205ENST00000487038 PALLDQ8WX93 1383 aa10.88□□□□□ -0.67
PDPN-205ENST00000487038 KIF3CO14782 793 aa10.87□□□□□ -0.67
PDPN-205ENST00000487038 L3MBTL2Q969R5 705 aa10.87□□□□□ -0.67
PDPN-205ENST00000487038 TNRC6CQ9HCJ0 1690 aaKnown RBP10.87□□□□□ -0.67
PDPN-205ENST00000487038 PCDH11XQ9BZA7 1347 aa10.86□□□□□ -0.67
PDPN-205ENST00000487038 PCDH11YQ9BZA8 1340 aa10.86□□□□□ -0.67
PDPN-205ENST00000487038 MAP2P11137 1827 aaKnown RBP10.86□□□□□ -0.67
PDPN-205ENST00000487038 TOMM70O94826 608 aa10.86□□□□□ -0.67
PDPN-205ENST00000487038 HOXC9P31274 260 aa10.86□□□□□ -0.67
PDPN-205ENST00000487038 AMPHP49418 695 aa10.86□□□□□ -0.67
PDPN-205ENST00000487038 RAPGEF4Q8WZA2 1011 aa10.86□□□□□ -0.67
PDPN-205ENST00000487038 COG3Q96JB2 828 aa10.86□□□□□ -0.67
PDPN-205ENST00000487038 PCNTO95613 3336 aa10.85□□□□□ -0.67
PDPN-205ENST00000487038 MAP3K19Q56UN5 1328 aa10.84□□□□□ -0.67
PDPN-205ENST00000487038 SMARCC1Q92922 1105 aaPredicted RBP10.84□□□□□ -0.67
PDPN-205ENST00000487038 WWC3Q9ULE0 1092 aa10.84□□□□□ -0.67
PDPN-205ENST00000487038 PLEKHG2Q9H7P9 1386 aa10.83□□□□□ -0.68
PDPN-205ENST00000487038 PHF14O94880 888 aa10.83□□□□□ -0.68
PDPN-205ENST00000487038 TATP17735 454 aaPredicted RBP10.83□□□□□ -0.68
PDPN-205ENST00000487038 SSFA2P28290 1259 aa10.83□□□□□ -0.68
PDPN-205ENST00000487038 C4AP0C0L4 1744 aa10.83□□□□□ -0.68
PDPN-205ENST00000487038 ZNF831Q5JPB2 1677 aa10.82□□□□□ -0.68
PDPN-205ENST00000487038 COL5A3P25940 1745 aaPredicted RBP10.82□□□□□ -0.68
PDPN-205ENST00000487038 MPRIPQ6WCQ1 1025 aa10.82□□□□□ -0.68
PDPN-205ENST00000487038 C16orf71Q8IYS4 520 aaPredicted RBP10.82□□□□□ -0.68
PDPN-205ENST00000487038 SLC12A5Q9H2X9 1139 aa10.82□□□□□ -0.68
PDPN-205ENST00000487038 PXDNLA1KZ92 1463 aa10.81□□□□□ -0.68
PDPN-205ENST00000487038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.81□□□□□ -0.68
PDPN-205ENST00000487038 PUS7Q96PZ0 661 aaKnown RBP10.81□□□□□ -0.68
PDPN-205ENST00000487038 CARD11Q9BXL7 1154 aa10.81□□□□□ -0.68
PDPN-205ENST00000487038 ANKRD26Q9UPS8 1709 aa10.81□□□□□ -0.68
PDPN-205ENST00000487038 DNAJC5GQ8N7S2 189 aa10.8□□□□□ -0.68
PDPN-205ENST00000487038 C10orf71Q711Q0 1435 aa10.79□□□□□ -0.68
PDPN-205ENST00000487038 TGFB2P61812 414 aa10.79□□□□□ -0.68
PDPN-205ENST00000487038 NBPF6Q5VWK0 638 aa10.79□□□□□ -0.68
PDPN-205ENST00000487038 USHBP1Q8N6Y0 703 aa10.79□□□□□ -0.68
PDPN-205ENST00000487038 RBM46Q8TBY0 533 aaKnown RBP10.79□□□□□ -0.68
PDPN-205ENST00000487038 KLRG1Q96E93 195 aa10.79□□□□□ -0.68
PDPN-205ENST00000487038 NBPF4Q96M43 638 aa10.79□□□□□ -0.68
PDPN-205ENST00000487038 BCS1LQ9Y276 419 aa10.79□□□□□ -0.68
PDPN-205ENST00000487038 SBF1O95248 1867 aa10.78□□□□□ -0.68
PDPN-205ENST00000487038 FLT4P35916 1363 aa10.78□□□□□ -0.68
PDPN-205ENST00000487038 KIF24Q5T7B8 1368 aa10.78□□□□□ -0.68
PDPN-205ENST00000487038 INSRP06213 1382 aa10.77□□□□□ -0.68
PDPN-205ENST00000487038 GNPATO15228 680 aa10.77□□□□□ -0.69
PDPN-205ENST00000487038 SLC24A1O60721 1099 aa10.77□□□□□ -0.69
PDPN-205ENST00000487038 CAPN15O75808 1086 aa10.77□□□□□ -0.69
PDPN-205ENST00000487038 FSTL1Q12841 308 aa10.77□□□□□ -0.69
PDPN-205ENST00000487038 TNS4Q8IZW8 715 aa10.77□□□□□ -0.69
PDPN-205ENST00000487038 NMRK2Q9NPI5 230 aa10.77□□□□□ -0.69
PDPN-205ENST00000487038 TIAM2Q8IVF5 1701 aa10.77□□□□□ -0.69
PDPN-205ENST00000487038 KDM2BQ8NHM5 1336 aa10.77□□□□□ -0.69
PDPN-205ENST00000487038 LOC102724428A0A0B4J2F2 783 aa10.76□□□□□ -0.69
PDPN-205ENST00000487038 MMP10P09238 476 aa10.76□□□□□ -0.69
PDPN-205ENST00000487038 SIK1P57059 783 aa10.76□□□□□ -0.69
PDPN-205ENST00000487038 NEUROD1Q13562 356 aa10.76□□□□□ -0.69
PDPN-205ENST00000487038 RRS1Q15050 365 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms