RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 PNPLA7Q6ZV29 1317 aa28.2■■■□□ 2.11
PHF1-208ENST00000486845 ZCRB1Q8TBF4 217 aaKnown RBP28.2■■■□□ 2.1
PHF1-208ENST00000486845 TFCP2L1Q9NZI6 479 aa28.2■■■□□ 2.1
PHF1-208ENST00000486845 COL24A1Q17RW2 1714 aa28.2■■■□□ 2.1
PHF1-208ENST00000486845 RGPD2P0DJD1 1756 aa28.19■■■□□ 2.1
PHF1-208ENST00000486845 LY75O60449 1722 aa28.19■■■□□ 2.1
PHF1-208ENST00000486845 SHANK3Q9BYB0 1731 aa28.19■■■□□ 2.1
PHF1-208ENST00000486845 MEGF6O75095 1541 aa28.18■■■□□ 2.1
PHF1-208ENST00000486845 TUBGCP6Q96RT7 1819 aa28.18■■■□□ 2.1
PHF1-208ENST00000486845 NSD2O96028 1365 aa28.18■■■□□ 2.1
PHF1-208ENST00000486845 GPR162Q16538 588 aa28.17■■■□□ 2.1
PHF1-208ENST00000486845 FBLN1P23142 703 aa28.16■■■□□ 2.1
PHF1-208ENST00000486845 KLHL34Q8N239 644 aa28.16■■■□□ 2.1
PHF1-208ENST00000486845 KCNQ4P56696 695 aa28.15■■■□□ 2.1
PHF1-208ENST00000486845 CGNL1Q0VF96 1302 aa28.14■■■□□ 2.09
PHF1-208ENST00000486845 SMG6Q86US8 1419 aaKnown RBP28.13■■■□□ 2.09
PHF1-208ENST00000486845 CCNL1Q9UK58 526 aaPredicted RBP28.13■■■□□ 2.09
PHF1-208ENST00000486845 RRS1Q15050 365 aaKnown RBP28.11■■■□□ 2.09
PHF1-208ENST00000486845 NBPF6Q5VWK0 638 aa28.11■■■□□ 2.09
PHF1-208ENST00000486845 NBPF4Q96M43 638 aa28.11■■■□□ 2.09
PHF1-208ENST00000486845 USP47Q96K76 1375 aa28.11■■■□□ 2.09
PHF1-208ENST00000486845 RAPGEF4Q8WZA2 1011 aa28.1■■■□□ 2.09
PHF1-208ENST00000486845 FYB1O15117 783 aa28.09■■■□□ 2.09
PHF1-208ENST00000486845 TMF1P82094 1093 aa28.08■■■□□ 2.09
PHF1-208ENST00000486845 PELP1Q8IZL8 1130 aaKnown RBP28.08■■■□□ 2.09
PHF1-208ENST00000486845 GGNBP2Q9H3C7 697 aa28.08■■■□□ 2.09
PHF1-208ENST00000486845 USHBP1Q8N6Y0 703 aa28.07■■■□□ 2.08
PHF1-208ENST00000486845 TATP17735 454 aaPredicted RBP28.06■■■□□ 2.08
PHF1-208ENST00000486845 MSH5O43196 834 aa28.05■■■□□ 2.08
PHF1-208ENST00000486845 C1QTNF8P60827 252 aa28.05■■■□□ 2.08
PHF1-208ENST00000486845 INSRP06213 1382 aa28.04■■■□□ 2.08
PHF1-208ENST00000486845 NLGN2Q8NFZ4 835 aa28.04■■■□□ 2.08
PHF1-208ENST00000486845 KIF20BQ96Q89 1820 aa28.04■■■□□ 2.08
PHF1-208ENST00000486845 PCDH11XQ9BZA7 1347 aa28.03■■■□□ 2.08
PHF1-208ENST00000486845 PCDH11YQ9BZA8 1340 aa28.03■■■□□ 2.08
PHF1-208ENST00000486845 HMGB2P26583 209 aaKnown RBP28.03■■■□□ 2.08
PHF1-208ENST00000486845 FLT4P35916 1363 aa28.02■■■□□ 2.08
PHF1-208ENST00000486845 KIF24Q5T7B8 1368 aa28.02■■■□□ 2.08
PHF1-208ENST00000486845 COL23A1Q86Y22 540 aaPredicted RBP28.02■■■□□ 2.08
PHF1-208ENST00000486845 C5P01031 1676 aa28.01■■■□□ 2.07
PHF1-208ENST00000486845 SENP3-EIF4A1A0A087X0R7 540 aa28.01■■■□□ 2.07
PHF1-208ENST00000486845 CDCA8Q53HL2 280 aa28■■■□□ 2.07
PHF1-208ENST00000486845 HSP90AB2PQ58FF8 381 aa28■■■□□ 2.07
PHF1-208ENST00000486845 GRIN3BO60391 1043 aa27.97■■■□□ 2.07
PHF1-208ENST00000486845 FLAD1Q8NFF5 587 aa27.97■■■□□ 2.07
PHF1-208ENST00000486845 PALLDQ8WX93 1383 aa27.97■■■□□ 2.07
PHF1-208ENST00000486845 GIGYF1O75420 1035 aaPredicted RBP27.96■■■□□ 2.07
PHF1-208ENST00000486845 GOLGB1Q14789 3259 aaKnown RBP27.95■■■□□ 2.07
PHF1-208ENST00000486845 TAF1LQ8IZX4 1826 aa27.95■■■□□ 2.07
PHF1-208ENST00000486845 MSL1Q68DK7 614 aa27.95■■■□□ 2.06
PHF1-208ENST00000486845 MPRIPQ6WCQ1 1025 aa27.94■■■□□ 2.06
PHF1-208ENST00000486845 CYP27B1O15528 508 aa27.93■■■□□ 2.06
PHF1-208ENST00000486845 YBX3P16989 372 aaKnown RBP eCLIP27.93■■■□□ 2.06
PHF1-208ENST00000486845 PKD1L3Q7Z443 1732 aa27.92■■■□□ 2.06
PHF1-208ENST00000486845 SMARCC1Q92922 1105 aaPredicted RBP27.92■■■□□ 2.06
PHF1-208ENST00000486845 TOGARAM1Q9Y4F4 1720 aa27.92■■■□□ 2.06
PHF1-208ENST00000486845 ITGB4P16144 1822 aa27.91■■■□□ 2.06
PHF1-208ENST00000486845 CD2APQ9Y5K6 639 aa27.9■■■□□ 2.06
PHF1-208ENST00000486845 C4BP0C0L5 1744 aa27.89■■■□□ 2.06
PHF1-208ENST00000486845 EMILIN1Q9Y6C2 1016 aa27.89■■■□□ 2.06
PHF1-208ENST00000486845 NSD3Q9BZ95 1437 aa27.89■■■□□ 2.06
PHF1-208ENST00000486845 NCAPD2Q15021 1401 aa27.88■■■□□ 2.05
PHF1-208ENST00000486845 AK7Q96M32 723 aa27.88■■■□□ 2.05
PHF1-208ENST00000486845 CARD14Q9BXL6 1004 aa27.88■■■□□ 2.05
PHF1-208ENST00000486845 ANKRD26Q9UPS8 1709 aa27.86■■■□□ 2.05
PHF1-208ENST00000486845 SPG7Q9UQ90 795 aa27.85■■■□□ 2.05
PHF1-208ENST00000486845 NKX1-1Q15270 411 aaPredicted RBP27.84■■■□□ 2.05
PHF1-208ENST00000486845 PIGBQ92521 554 aa27.84■■■□□ 2.05
PHF1-208ENST00000486845 UBR3Q6ZT12 1888 aa27.83■■■□□ 2.05
PHF1-208ENST00000486845 PPM1GO15355 546 aaPredicted RBP27.83■■■□□ 2.05
PHF1-208ENST00000486845 WASHC2AQ641Q2 1341 aa27.81■■■□□ 2.04
PHF1-208ENST00000486845 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.8■■■□□ 2.043e-6■□□□□ 9.1
PHF1-208ENST00000486845 ATP10DQ9P241 1426 aa27.8■■■□□ 2.04
PHF1-208ENST00000486845 MAP2P11137 1827 aaKnown RBP27.79■■■□□ 2.04
PHF1-208ENST00000486845 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.79■■■□□ 2.04
PHF1-208ENST00000486845 PHF14O94880 888 aa27.79■■■□□ 2.04
PHF1-208ENST00000486845 LOC102724428A0A0B4J2F2 783 aa27.78■■■□□ 2.04
PHF1-208ENST00000486845 SSFA2P28290 1259 aa27.78■■■□□ 2.04
PHF1-208ENST00000486845 SIK1P57059 783 aa27.78■■■□□ 2.04
PHF1-208ENST00000486845 AMIGO3Q86WK7 504 aa27.78■■■□□ 2.04
PHF1-208ENST00000486845 TMOD3Q9NYL9 352 aa27.78■■■□□ 2.04
PHF1-208ENST00000486845 EYA1Q99502 592 aa27.77■■■□□ 2.04
PHF1-208ENST00000486845 LINC00116Q8NCU8 138 aa27.75■■■□□ 2.03
PHF1-208ENST00000486845 IGSF1Q8N6C5 1336 aa27.73■■■□□ 2.03
PHF1-208ENST00000486845 IFNL2Q8IZJ0 200 aa27.73■■■□□ 2.03
PHF1-208ENST00000486845 ADCY9O60503 1353 aa27.73■■■□□ 2.03
PHF1-208ENST00000486845 PHKG2P15735 406 aa27.72■■■□□ 2.03
PHF1-208ENST00000486845 TRIM26Q12899 539 aaPredicted RBP27.72■■■□□ 2.03
PHF1-208ENST00000486845 SMIM5Q71RC9 77 aa27.72■■■□□ 2.03
PHF1-208ENST00000486845 POLKQ9UBT6 870 aa27.72■■■□□ 2.03
PHF1-208ENST00000486845 GPBP1L1Q9HC44 474 aaPredicted RBP27.71■■■□□ 2.03
PHF1-208ENST00000486845 ASAP1Q9ULH1 1129 aa27.71■■■□□ 2.03
PHF1-208ENST00000486845 PLEKHG2Q9H7P9 1386 aa27.71■■■□□ 2.03
PHF1-208ENST00000486845 GNPATO15228 680 aa27.7■■■□□ 2.02
PHF1-208ENST00000486845 TIMELESSQ9UNS1 1208 aa27.7■■■□□ 2.02
PHF1-208ENST00000486845 ATP6V1AP38606 617 aa27.69■■■□□ 2.02
PHF1-208ENST00000486845 ITPK1Q13572 414 aa27.69■■■□□ 2.02
PHF1-208ENST00000486845 ATG3Q9NT62 314 aa27.67■■■□□ 2.02
PHF1-208ENST00000486845 EIF4A2Q14240 407 aaKnown RBP27.66■■■□□ 2.02
PHF1-208ENST00000486845 WWC3Q9ULE0 1092 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms