RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 FLAD1Q8NFF5 587 aa12.32□□□□□ -0.44
APTX-228ENST00000486724 KDM2BQ8NHM5 1336 aa12.32□□□□□ -0.44
APTX-228ENST00000486724 USP54Q70EL1 1684 aa12.32□□□□□ -0.44
APTX-228ENST00000486724 QRICH2Q9H0J4 1663 aa12.32□□□□□ -0.44
APTX-228ENST00000486724 PKD1L3Q7Z443 1732 aa12.31□□□□□ -0.44
APTX-228ENST00000486724 KCNH5Q8NCM2 988 aa12.31□□□□□ -0.44
APTX-228ENST00000486724 C5P01031 1676 aa12.31□□□□□ -0.44
APTX-228ENST00000486724 KCPQ6ZWJ8 1503 aa12.31□□□□□ -0.44
APTX-228ENST00000486724 DOT1LQ8TEK3 1739 aa12.31□□□□□ -0.44
APTX-228ENST00000486724 PXDNLA1KZ92 1463 aa12.3□□□□□ -0.44
APTX-228ENST00000486724 MLLT1Q03111 559 aaPredicted RBP12.3□□□□□ -0.44
APTX-228ENST00000486724 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
APTX-228ENST00000486724 PRDM10Q9NQV6 1147 aa12.3□□□□□ -0.44
APTX-228ENST00000486724 ANKRD36BQ8N2N9 1353 aa12.3□□□□□ -0.44
APTX-228ENST00000486724 NFAT5O94916 1531 aa12.28□□□□□ -0.44
APTX-228ENST00000486724 ARHGAP27Q6ZUM4 889 aa12.28□□□□□ -0.44
APTX-228ENST00000486724 NLRP2Q9NX02 1062 aa12.28□□□□□ -0.44
APTX-228ENST00000486724 NSD2O96028 1365 aa12.28□□□□□ -0.44
APTX-228ENST00000486724 SOX12O15370 315 aa12.27□□□□□ -0.45
APTX-228ENST00000486724 HMGB2P26583 209 aaKnown RBP12.27□□□□□ -0.45
APTX-228ENST00000486724 BCS1LQ9Y276 419 aa12.27□□□□□ -0.45
APTX-228ENST00000486724 ERBB3P21860 1342 aa12.27□□□□□ -0.45
APTX-228ENST00000486724 KIAA1551Q9HCM1 1747 aa12.26□□□□□ -0.45
APTX-228ENST00000486724 FOXN1O15353 648 aa12.26□□□□□ -0.45
APTX-228ENST00000486724 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
APTX-228ENST00000486724 C9orf131Q5VYM1 1079 aa12.26□□□□□ -0.45
APTX-228ENST00000486724 MPHOSPH9Q99550 1183 aa12.26□□□□□ -0.45
APTX-228ENST00000486724 RRAGCQ9HB90 399 aa12.26□□□□□ -0.45
APTX-228ENST00000486724 SRPK2P78362 688 aaKnown RBP12.25□□□□□ -0.45
APTX-228ENST00000486724 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
APTX-228ENST00000486724 ABHD8Q96I13 439 aa12.25□□□□□ -0.45
APTX-228ENST00000486724 USP47Q96K76 1375 aa12.25□□□□□ -0.45
APTX-228ENST00000486724 KIF13BQ9NQT8 1826 aa12.25□□□□□ -0.45
APTX-228ENST00000486724 N4BP2Q86UW6 1770 aaPredicted RBP12.24□□□□□ -0.45
APTX-228ENST00000486724 TAF1LQ8IZX4 1826 aa12.24□□□□□ -0.45
APTX-228ENST00000486724 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
APTX-228ENST00000486724 TOGARAM1Q9Y4F4 1720 aa12.24□□□□□ -0.45
APTX-228ENST00000486724 NSD3Q9BZ95 1437 aa12.23□□□□□ -0.45
APTX-228ENST00000486724 CTCFP49711 727 aaPredicted RBP12.23□□□□□ -0.45
APTX-228ENST00000486724 TNRC18O15417 2968 aaPredicted RBP12.23□□□□□ -0.45
APTX-228ENST00000486724 RGS19P49795 217 aa12.22□□□□□ -0.45
APTX-228ENST00000486724 AIDAQ96BJ3 306 aa12.22□□□□□ -0.45
APTX-228ENST00000486724 C4BP0C0L5 1744 aa12.22□□□□□ -0.45
APTX-228ENST00000486724 TGFB2P61812 414 aa12.21□□□□□ -0.45
APTX-228ENST00000486724 BRCA1P38398 1863 aaKnown RBP12.21□□□□□ -0.46
APTX-228ENST00000486724 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.46
APTX-228ENST00000486724 ARFGEF1Q9Y6D6 1849 aa12.21□□□□□ -0.46
APTX-228ENST00000486724 FCHSD2O94868 740 aa12.2□□□□□ -0.46
APTX-228ENST00000486724 ZEB1P37275 1124 aaPredicted RBP12.2□□□□□ -0.46
APTX-228ENST00000486724 AK7Q96M32 723 aa12.2□□□□□ -0.46
APTX-228ENST00000486724 CABP1Q9NZU7 370 aa12.2□□□□□ -0.46
APTX-228ENST00000486724 RNF181Q9P0P0 153 aa12.2□□□□□ -0.46
APTX-228ENST00000486724 PHF14O94880 888 aa12.19□□□□□ -0.46
APTX-228ENST00000486724 ANKRD24Q8TF21 1146 aa12.19□□□□□ -0.46
APTX-228ENST00000486724 CABP2Q9NPB3 220 aa12.19□□□□□ -0.46
APTX-228ENST00000486724 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
APTX-228ENST00000486724 LTN1O94822 1766 aa12.19□□□□□ -0.46
APTX-228ENST00000486724 FAM208AQ9UK61 1670 aaKnown RBP12.19□□□□□ -0.46
APTX-228ENST00000486724 TTC21BQ7Z4L5 1316 aa12.18□□□□□ -0.46
APTX-228ENST00000486724 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.18□□□□□ -0.46
APTX-228ENST00000486724 A0A0G2JLW4 131 aa12.18□□□□□ -0.46
APTX-228ENST00000486724 CREBZFQ9NS37 354 aa12.18□□□□□ -0.46
APTX-228ENST00000486724 KDM2AQ9Y2K7 1162 aa12.18□□□□□ -0.46
APTX-228ENST00000486724 TTC21AQ8NDW8 1320 aa12.17□□□□□ -0.46
APTX-228ENST00000486724 ZC3H4Q9UPT8 1303 aaKnown RBP12.17□□□□□ -0.46
APTX-228ENST00000486724 CCDC85CA6NKD9 419 aa12.17□□□□□ -0.46
APTX-228ENST00000486724 VEGFAP15692 232 aaPredicted RBP12.17□□□□□ -0.46
APTX-228ENST00000486724 AMIGO3Q86WK7 504 aa12.17□□□□□ -0.46
APTX-228ENST00000486724 STAC3Q96MF2 364 aa12.17□□□□□ -0.46
APTX-228ENST00000486724 MMP10P09238 476 aa12.16□□□□□ -0.46
APTX-228ENST00000486724 SSFA2P28290 1259 aa12.16□□□□□ -0.46
APTX-228ENST00000486724 LBX1P52954 281 aa12.16□□□□□ -0.46
APTX-228ENST00000486724 DCAF11Q8TEB1 546 aa12.16□□□□□ -0.46
APTX-228ENST00000486724 PALLDQ8WX93 1383 aa12.16□□□□□ -0.46
APTX-228ENST00000486724 ADRA2BP18089 450 aa12.15□□□□□ -0.46
APTX-228ENST00000486724 SMIM5Q71RC9 77 aa12.15□□□□□ -0.46
APTX-228ENST00000486724 CNTNAP1P78357 1384 aa12.15□□□□□ -0.46
APTX-228ENST00000486724 DPEP1P16444 411 aa12.14□□□□□ -0.47
APTX-228ENST00000486724 SBF1O95248 1867 aa12.14□□□□□ -0.47
APTX-228ENST00000486724 DCAF5Q96JK2 942 aa12.13□□□□□ -0.47
APTX-228ENST00000486724 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
APTX-228ENST00000486724 ZCRB1Q8TBF4 217 aaKnown RBP12.12□□□□□ -0.47
APTX-228ENST00000486724 CENPJQ9HC77 1338 aaPredicted RBP12.11□□□□□ -0.47
APTX-228ENST00000486724 GLTPD2A6NH11 291 aa12.11□□□□□ -0.47
APTX-228ENST00000486724 CCDC87Q9NVE4 849 aa12.11□□□□□ -0.47
APTX-228ENST00000486724 WBP1LQ9NX94 342 aa12.11□□□□□ -0.47
APTX-228ENST00000486724 PIM2Q9P1W9 311 aa12.11□□□□□ -0.47
APTX-228ENST00000486724 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
APTX-228ENST00000486724 PDE4DIPQ5VU43 2346 aa12.1□□□□□ -0.47
APTX-228ENST00000486724 VIRMAQ69YN4 1812 aaKnown RBP12.1□□□□□ -0.47
APTX-228ENST00000486724 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
APTX-228ENST00000486724 DALRD3Q5D0E6 543 aaKnown RBP12.1□□□□□ -0.47
APTX-228ENST00000486724 TIAM2Q8IVF5 1701 aa12.1□□□□□ -0.47
APTX-228ENST00000486724 KDM6AO15550 1401 aaPredicted RBP12.1□□□□□ -0.47
APTX-228ENST00000486724 USP31Q70CQ4 1352 aa12.09□□□□□ -0.47
APTX-228ENST00000486724 KCNA3P22001 575 aa12.09□□□□□ -0.47
APTX-228ENST00000486724 SMARCC1Q92922 1105 aaPredicted RBP12.09□□□□□ -0.47
APTX-228ENST00000486724 MEGF6O75095 1541 aa12.09□□□□□ -0.47
APTX-228ENST00000486724 MON2Q7Z3U7 1717 aa12.08□□□□□ -0.48
APTX-228ENST00000486724 KTN1Q86UP2 1357 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms