RNA–Protein interactions for RNA: ENST00000486560.1

GSDMB-210, Transcript of gasdermin B, humanhuman

TSL 3

Gene GSDMB, Length 318 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-210ENST00000486560 ZCRB1Q8TBF4 217 aaKnown RBP16.23■□□□□ 0.19
GSDMB-210ENST00000486560 BTAF1O14981 1849 aa16.23■□□□□ 0.19
GSDMB-210ENST00000486560 PER1O15534 1290 aaPredicted RBP16.22■□□□□ 0.19
GSDMB-210ENST00000486560 EYA1Q99502 592 aa16.22■□□□□ 0.19
GSDMB-210ENST00000486560 MTHFSP49914 203 aa16.21■□□□□ 0.19
GSDMB-210ENST00000486560 PKD1L3Q7Z443 1732 aa16.2■□□□□ 0.18
GSDMB-210ENST00000486560 PTF1AQ7RTS3 328 aa16.2■□□□□ 0.18
GSDMB-210ENST00000486560 NUP188Q5SRE5 1749 aa16.19■□□□□ 0.18
GSDMB-210ENST00000486560 RREB1Q92766 1687 aa16.19■□□□□ 0.18
GSDMB-210ENST00000486560 KCNQ2O43526 872 aa16.19■□□□□ 0.18
GSDMB-210ENST00000486560 DDX10Q13206 875 aaKnown RBP16.19■□□□□ 0.18
GSDMB-210ENST00000486560 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
GSDMB-210ENST00000486560 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
GSDMB-210ENST00000486560 ITGB4P16144 1822 aa16.18■□□□□ 0.18
GSDMB-210ENST00000486560 BCL11BQ9C0K0 894 aaPredicted RBP16.18■□□□□ 0.18
GSDMB-210ENST00000486560 PSDA5PKW4 1024 aaPredicted RBP16.17■□□□□ 0.18
GSDMB-210ENST00000486560 SPG7Q9UQ90 795 aa16.17■□□□□ 0.18
GSDMB-210ENST00000486560 U2SURPO15042 1029 aaKnown RBP16.16■□□□□ 0.18
GSDMB-210ENST00000486560 VIRMAQ69YN4 1812 aaKnown RBP16.16■□□□□ 0.18
GSDMB-210ENST00000486560 RGPD3A6NKT7 1758 aaPredicted RBP16.15■□□□□ 0.18
GSDMB-210ENST00000486560 RGPD4Q7Z3J3 1758 aa16.15■□□□□ 0.18
GSDMB-210ENST00000486560 NPC1L1Q9UHC9 1359 aa16.15■□□□□ 0.18
GSDMB-210ENST00000486560 SULT6B1Q6IMI4 303 aa16.15■□□□□ 0.18
GSDMB-210ENST00000486560 CFAP53Q96M91 514 aa16.15■□□□□ 0.18
GSDMB-210ENST00000486560 DIAPH1O60610 1272 aaKnown RBP16.14■□□□□ 0.17
GSDMB-210ENST00000486560 HMOX1P09601 288 aa16.14■□□□□ 0.17
GSDMB-210ENST00000486560 PRIM1P49642 420 aaKnown RBP16.14■□□□□ 0.17
GSDMB-210ENST00000486560 AEBP1Q8IUX7 1158 aa16.14■□□□□ 0.17
GSDMB-210ENST00000486560 CAMKK2Q96RR4 588 aa16.14■□□□□ 0.17
GSDMB-210ENST00000486560 IGSF1Q8N6C5 1336 aa16.14■□□□□ 0.17
GSDMB-210ENST00000486560 TOGARAM1Q9Y4F4 1720 aa16.14■□□□□ 0.17
GSDMB-210ENST00000486560 R3HDM1Q15032 1099 aaKnown RBP16.13■□□□□ 0.17
GSDMB-210ENST00000486560 BCL9O00512 1426 aa16.12■□□□□ 0.17
GSDMB-210ENST00000486560 NBPF14Q5TI25 921 aa16.12■□□□□ 0.17
GSDMB-210ENST00000486560 PARD3Q8TEW0 1356 aa16.12■□□□□ 0.17
GSDMB-210ENST00000486560 NCAPD2Q15021 1401 aa16.11■□□□□ 0.17
GSDMB-210ENST00000486560 CYP27B1O15528 508 aa16.11■□□□□ 0.17
GSDMB-210ENST00000486560 IL13P35225 146 aa16.11■□□□□ 0.17
GSDMB-210ENST00000486560 PLEKHO1Q53GL0 409 aaPredicted RBP16.11■□□□□ 0.17
GSDMB-210ENST00000486560 ZNF530Q6P9A1 599 aaPredicted RBP16.11■□□□□ 0.17
GSDMB-210ENST00000486560 MPRIPQ6WCQ1 1025 aa16.11■□□□□ 0.17
GSDMB-210ENST00000486560 PPP2R1AP30153 589 aa16.1■□□□□ 0.17
GSDMB-210ENST00000486560 C1orf141Q5JVX7 400 aa16.1■□□□□ 0.17
GSDMB-210ENST00000486560 PLSCR1O15162 318 aa16.09■□□□□ 0.17
GSDMB-210ENST00000486560 TXNRD1Q16881 649 aa16.09■□□□□ 0.17
GSDMB-210ENST00000486560 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
GSDMB-210ENST00000486560 PHKG2P15735 406 aa16.07■□□□□ 0.16
GSDMB-210ENST00000486560 NUDCQ9Y266 331 aa16.07■□□□□ 0.16
GSDMB-210ENST00000486560 LY75O60449 1722 aa16.07■□□□□ 0.16
GSDMB-210ENST00000486560 COL3A1P02461 1466 aaPredicted RBP16.06■□□□□ 0.16
GSDMB-210ENST00000486560 KCNQ4P56696 695 aa16.06■□□□□ 0.16
GSDMB-210ENST00000486560 AMOTQ4VCS5 1084 aa16.06■□□□□ 0.16
GSDMB-210ENST00000486560 TMOD3Q9NYL9 352 aa16.06■□□□□ 0.16
GSDMB-210ENST00000486560 SCN11AQ9UI33 1791 aa16.05■□□□□ 0.16
GSDMB-210ENST00000486560 U2AF1L5P0DN76 240 aaPredicted RBP16.05■□□□□ 0.16
GSDMB-210ENST00000486560 U2AF1Q01081 240 aaKnown RBP eCLIP16.05■□□□□ 0.16
GSDMB-210ENST00000486560 STK32BQ9NY57 414 aa16.05■□□□□ 0.16
GSDMB-210ENST00000486560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.05■□□□□ 0.166e-7■■■□□ 19.2
GSDMB-210ENST00000486560 C5P01031 1676 aa16.03■□□□□ 0.16
GSDMB-210ENST00000486560 ZNF316A6NFI3 1004 aaPredicted RBP16.03■□□□□ 0.16
GSDMB-210ENST00000486560 HSP90AB1P08238 724 aaKnown RBP16.03■□□□□ 0.16
GSDMB-210ENST00000486560 CCNL1Q9UK58 526 aaPredicted RBP16.03■□□□□ 0.16
GSDMB-210ENST00000486560 PROM2Q8N271 834 aa16.02■□□□□ 0.16
GSDMB-210ENST00000486560 ANO8Q9HCE9 1232 aaPredicted RBP16.02■□□□□ 0.16
GSDMB-210ENST00000486560 TAF1LQ8IZX4 1826 aa16.02■□□□□ 0.16
GSDMB-210ENST00000486560 TUBGCP6Q96RT7 1819 aa16.02■□□□□ 0.16
GSDMB-210ENST00000486560 KDRP35968 1356 aa16.01■□□□□ 0.15
GSDMB-210ENST00000486560 PALLDQ8WX93 1383 aa16.01■□□□□ 0.15
GSDMB-210ENST00000486560 CABP4P57796 275 aa16.01■□□□□ 0.15
GSDMB-210ENST00000486560 NEFMP07197 916 aa16■□□□□ 0.15
GSDMB-210ENST00000486560 PRKAR2BP31323 418 aa16■□□□□ 0.15
GSDMB-210ENST00000486560 RALBP1Q15311 655 aa16■□□□□ 0.15
GSDMB-210ENST00000486560 PIGBQ92521 554 aa16■□□□□ 0.15
GSDMB-210ENST00000486560 DCAF5Q96JK2 942 aa16■□□□□ 0.15
GSDMB-210ENST00000486560 MSH5O43196 834 aa15.99■□□□□ 0.15
GSDMB-210ENST00000486560 NKX1-1Q15270 411 aaPredicted RBP15.99■□□□□ 0.15
GSDMB-210ENST00000486560 SMARCC1Q92922 1105 aaPredicted RBP15.99■□□□□ 0.15
GSDMB-210ENST00000486560 RBM42Q9BTD8 480 aaKnown RBP15.99■□□□□ 0.15
GSDMB-210ENST00000486560 DLG5Q8TDM6 1919 aa15.98■□□□□ 0.15
GSDMB-210ENST00000486560 KDM6AO15550 1401 aaPredicted RBP15.98■□□□□ 0.15
GSDMB-210ENST00000486560 MTHFSDQ2M296 383 aaKnown RBP15.98■□□□□ 0.15
GSDMB-210ENST00000486560 AKAP4Q5JQC9 854 aa15.98■□□□□ 0.15
GSDMB-210ENST00000486560 SLC27A3Q5K4L6 730 aa15.98■□□□□ 0.15
GSDMB-210ENST00000486560 LRRC4BQ9NT99 713 aa15.98■□□□□ 0.15
GSDMB-210ENST00000486560 PAPPAQ13219 1627 aa15.97■□□□□ 0.15
GSDMB-210ENST00000486560 MYBBP1AQ9BQG0 1328 aaKnown RBP15.97■□□□□ 0.15
GSDMB-210ENST00000486560 SLC15A2Q16348 729 aa15.97■□□□□ 0.15
GSDMB-210ENST00000486560 TFCP2L1Q9NZI6 479 aa15.97■□□□□ 0.15
GSDMB-210ENST00000486560 ASAP1Q9ULH1 1129 aa15.97■□□□□ 0.15
GSDMB-210ENST00000486560 PLEKHG2Q9H7P9 1386 aa15.97■□□□□ 0.15
GSDMB-210ENST00000486560 CASZ1Q86V15 1759 aa15.95■□□□□ 0.14
GSDMB-210ENST00000486560 ERVV-2B6SEH9 535 aa15.95■□□□□ 0.14
GSDMB-210ENST00000486560 ZNF827Q17R98 1081 aa15.95■□□□□ 0.14
GSDMB-210ENST00000486560 NFATC2IPQ8NCF5 419 aa15.95■□□□□ 0.14
GSDMB-210ENST00000486560 GAS2L2Q8NHY3 880 aa15.95■□□□□ 0.14
GSDMB-210ENST00000486560 LRP5O75197 1615 aa15.94■□□□□ 0.14
GSDMB-210ENST00000486560 ZBTB7AO95365 584 aa15.94■□□□□ 0.14
GSDMB-210ENST00000486560 RSPH6AQ9H0K4 717 aa15.94■□□□□ 0.14
GSDMB-210ENST00000486560 LGR6Q9HBX8 967 aa15.94■□□□□ 0.14
GSDMB-210ENST00000486560 PPP1R1BQ9UD71 204 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms