RNA–Protein interactions for RNA: ENST00000486435.1

C3orf33-204, Transcript of chromosome 3 open reading frame 33, humanhuman

TSL 5

Gene C3orf33, Length 864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf33-204ENST00000486435 PARD3Q8TEW0 1356 aa17.17■□□□□ 0.34
C3orf33-204ENST00000486435 MEGF6O75095 1541 aa17.17■□□□□ 0.34
C3orf33-204ENST00000486435 TNNT2P45379 298 aaPredicted RBP17.17■□□□□ 0.34
C3orf33-204ENST00000486435 EZH2Q15910 746 aaKnown RBP17.17■□□□□ 0.34
C3orf33-204ENST00000486435 AMER1Q5JTC6 1135 aaPredicted RBP17.17■□□□□ 0.34
C3orf33-204ENST00000486435 PER1O15534 1290 aaPredicted RBP17.16■□□□□ 0.34
C3orf33-204ENST00000486435 USHBP1Q8N6Y0 703 aa17.16■□□□□ 0.34
C3orf33-204ENST00000486435 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
C3orf33-204ENST00000486435 PTF1AQ7RTS3 328 aa17.15■□□□□ 0.34
C3orf33-204ENST00000486435 RREB1Q92766 1687 aa17.15■□□□□ 0.34
C3orf33-204ENST00000486435 SHANK3Q9BYB0 1731 aa17.15■□□□□ 0.34
C3orf33-204ENST00000486435 RGPD3A6NKT7 1758 aaPredicted RBP17.15■□□□□ 0.34
C3orf33-204ENST00000486435 RGPD4Q7Z3J3 1758 aa17.15■□□□□ 0.34
C3orf33-204ENST00000486435 NCAPD2Q15021 1401 aa17.14■□□□□ 0.33
C3orf33-204ENST00000486435 MORC1Q86VD1 984 aa17.14■□□□□ 0.33
C3orf33-204ENST00000486435 SRCAPQ6ZRS2 3230 aa17.14■□□□□ 0.33
C3orf33-204ENST00000486435 NHSQ6T4R5 1651 aa17.13■□□□□ 0.33
C3orf33-204ENST00000486435 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
C3orf33-204ENST00000486435 PLSCR1O15162 318 aa17.12■□□□□ 0.33
C3orf33-204ENST00000486435 RAPGEF4Q8WZA2 1011 aa17.12■□□□□ 0.33
C3orf33-204ENST00000486435 NUP188Q5SRE5 1749 aa17.12■□□□□ 0.33
C3orf33-204ENST00000486435 KCNQ2O43526 872 aa17.11■□□□□ 0.33
C3orf33-204ENST00000486435 ZCRB1Q8TBF4 217 aaKnown RBP17.11■□□□□ 0.33
C3orf33-204ENST00000486435 DDX54Q8TDD1 881 aaKnown RBP17.11■□□□□ 0.33
C3orf33-204ENST00000486435 TATP17735 454 aaPredicted RBP17.1■□□□□ 0.33
C3orf33-204ENST00000486435 EIF4A2Q14240 407 aaKnown RBP17.1■□□□□ 0.33
C3orf33-204ENST00000486435 ACSBG1Q96GR2 724 aa17.1■□□□□ 0.33
C3orf33-204ENST00000486435 EYA1Q99502 592 aa17.1■□□□□ 0.33
C3orf33-204ENST00000486435 NPC1L1Q9UHC9 1359 aa17.09■□□□□ 0.33
C3orf33-204ENST00000486435 CAPN15O75808 1086 aa17.08■□□□□ 0.32
C3orf33-204ENST00000486435 PKD1L3Q7Z443 1732 aa17.07■□□□□ 0.32
C3orf33-204ENST00000486435 DOT1LQ8TEK3 1739 aa17.07■□□□□ 0.32
C3orf33-204ENST00000486435 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
C3orf33-204ENST00000486435 PCDH11XQ9BZA7 1347 aa17.06■□□□□ 0.32
C3orf33-204ENST00000486435 PCDH11YQ9BZA8 1340 aa17.06■□□□□ 0.32
C3orf33-204ENST00000486435 BTAF1O14981 1849 aa17.06■□□□□ 0.32
C3orf33-204ENST00000486435 PSDA5PKW4 1024 aaPredicted RBP17.06■□□□□ 0.32
C3orf33-204ENST00000486435 CC2D1BQ5T0F9 858 aaKnown RBP17.06■□□□□ 0.32
C3orf33-204ENST00000486435 PROM2Q8N271 834 aa17.05■□□□□ 0.32
C3orf33-204ENST00000486435 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
C3orf33-204ENST00000486435 R3HDM1Q15032 1099 aaKnown RBP17.04■□□□□ 0.32
C3orf33-204ENST00000486435 PLEKHG2Q9H7P9 1386 aa17.03■□□□□ 0.32
C3orf33-204ENST00000486435 CYP27B1O15528 508 aa17.03■□□□□ 0.32
C3orf33-204ENST00000486435 PRIM1P49642 420 aaKnown RBP17.02■□□□□ 0.32
C3orf33-204ENST00000486435 MTHFSP49914 203 aa17.02■□□□□ 0.32
C3orf33-204ENST00000486435 TXNRD1Q16881 649 aa17.02■□□□□ 0.32
C3orf33-204ENST00000486435 NBPF14Q5TI25 921 aa17.02■□□□□ 0.32
C3orf33-204ENST00000486435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.02■□□□□ 0.32
C3orf33-204ENST00000486435 IL13P35225 146 aa17.01■□□□□ 0.31
C3orf33-204ENST00000486435 SPG7Q9UQ90 795 aa17.01■□□□□ 0.31
C3orf33-204ENST00000486435 SYTL4Q96C24 671 aaPredicted RBP17■□□□□ 0.31
C3orf33-204ENST00000486435 KAT6BQ8WYB5 2073 aa17■□□□□ 0.31
C3orf33-204ENST00000486435 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
C3orf33-204ENST00000486435 ANO8Q9HCE9 1232 aaPredicted RBP16.99■□□□□ 0.31
C3orf33-204ENST00000486435 KDRP35968 1356 aa16.99■□□□□ 0.31
C3orf33-204ENST00000486435 LRP5O75197 1615 aa16.99■□□□□ 0.31
C3orf33-204ENST00000486435 CNGB1Q14028 1251 aaPredicted RBP16.98■□□□□ 0.31
C3orf33-204ENST00000486435 NKX1-1Q15270 411 aaPredicted RBP16.98■□□□□ 0.31
C3orf33-204ENST00000486435 PAPPAQ13219 1627 aa16.97■□□□□ 0.31
C3orf33-204ENST00000486435 AEBP1Q8IUX7 1158 aa16.97■□□□□ 0.31
C3orf33-204ENST00000486435 PHKG2P15735 406 aa16.96■□□□□ 0.31
C3orf33-204ENST00000486435 SULT6B1Q6IMI4 303 aa16.96■□□□□ 0.31
C3orf33-204ENST00000486435 IFNL2Q8IZJ0 200 aa16.96■□□□□ 0.31
C3orf33-204ENST00000486435 COL3A1P02461 1466 aaPredicted RBP16.96■□□□□ 0.31
C3orf33-204ENST00000486435 LY75O60449 1722 aa16.96■□□□□ 0.3
C3orf33-204ENST00000486435 LRRC4BQ9NT99 713 aa16.95■□□□□ 0.3
C3orf33-204ENST00000486435 ITGB4P16144 1822 aa16.94■□□□□ 0.3
C3orf33-204ENST00000486435 DIAPH1O60610 1272 aaKnown RBP16.94■□□□□ 0.3
C3orf33-204ENST00000486435 SLC27A3Q5K4L6 730 aa16.94■□□□□ 0.3
C3orf33-204ENST00000486435 SLC15A2Q16348 729 aa16.93■□□□□ 0.3
C3orf33-204ENST00000486435 AMOTQ4VCS5 1084 aa16.93■□□□□ 0.3
C3orf33-204ENST00000486435 PLEKHO1Q53GL0 409 aaPredicted RBP16.93■□□□□ 0.3
C3orf33-204ENST00000486435 STK32BQ9NY57 414 aa16.93■□□□□ 0.3
C3orf33-204ENST00000486435 CASZ1Q86V15 1759 aa16.92■□□□□ 0.3
C3orf33-204ENST00000486435 MPRIPQ6WCQ1 1025 aa16.92■□□□□ 0.3
C3orf33-204ENST00000486435 DSG3P32926 999 aa16.91■□□□□ 0.3
C3orf33-204ENST00000486435 PPP2R1AP30153 589 aa16.9■□□□□ 0.3
C3orf33-204ENST00000486435 ZNF530Q6P9A1 599 aaPredicted RBP16.9■□□□□ 0.3
C3orf33-204ENST00000486435 PIGBQ92521 554 aa16.9■□□□□ 0.3
C3orf33-204ENST00000486435 HSP90AB1P08238 724 aaKnown RBP16.89■□□□□ 0.29
C3orf33-204ENST00000486435 HMOX1P09601 288 aa16.89■□□□□ 0.29
C3orf33-204ENST00000486435 KCNQ4P56696 695 aa16.89■□□□□ 0.29
C3orf33-204ENST00000486435 ZNF827Q17R98 1081 aa16.89■□□□□ 0.29
C3orf33-204ENST00000486435 DCAF5Q96JK2 942 aa16.89■□□□□ 0.29
C3orf33-204ENST00000486435 PDGFDQ9GZP0 370 aaPredicted RBP16.89■□□□□ 0.29
C3orf33-204ENST00000486435 CCNL1Q9UK58 526 aaPredicted RBP16.89■□□□□ 0.29
C3orf33-204ENST00000486435 PALLDQ8WX93 1383 aa16.89■□□□□ 0.29
C3orf33-204ENST00000486435 KDM6AO15550 1401 aaPredicted RBP16.88■□□□□ 0.29
C3orf33-204ENST00000486435 ZEB1P37275 1124 aaPredicted RBP16.88■□□□□ 0.29
C3orf33-204ENST00000486435 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
C3orf33-204ENST00000486435 TMOD3Q9NYL9 352 aa16.88■□□□□ 0.29
C3orf33-204ENST00000486435 SMARCC1Q92922 1105 aaPredicted RBP16.87■□□□□ 0.29
C3orf33-204ENST00000486435 ERVV-2B6SEH9 535 aa16.86■□□□□ 0.29
C3orf33-204ENST00000486435 C1orf141Q5JVX7 400 aa16.86■□□□□ 0.29
C3orf33-204ENST00000486435 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
C3orf33-204ENST00000486435 QSER1Q2KHR3 1735 aa16.86■□□□□ 0.29
C3orf33-204ENST00000486435 C5P01031 1676 aa16.85■□□□□ 0.29
C3orf33-204ENST00000486435 U2SURPO15042 1029 aaKnown RBP16.85■□□□□ 0.29
C3orf33-204ENST00000486435 SPON1Q9HCB6 807 aa16.85■□□□□ 0.29
C3orf33-204ENST00000486435 AKAP4Q5JQC9 854 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms