RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 R3HDM1Q15032 1099 aaKnown RBP25.09■■□□□ 1.61
CLDN11-206ENST00000486429 ACSBG1Q96GR2 724 aa25.09■■□□□ 1.61
CLDN11-206ENST00000486429 ZCRB1Q8TBF4 217 aaKnown RBP25.08■■□□□ 1.61
CLDN11-206ENST00000486429 NCAPD2Q15021 1401 aa25.08■■□□□ 1.61
CLDN11-206ENST00000486429 DOT1LQ8TEK3 1739 aa25.08■■□□□ 1.61
CLDN11-206ENST00000486429 LRP5O75197 1615 aa25.08■■□□□ 1.6
CLDN11-206ENST00000486429 KCNQ2O43526 872 aa25.07■■□□□ 1.6
CLDN11-206ENST00000486429 TATP17735 454 aaPredicted RBP25.07■■□□□ 1.6
CLDN11-206ENST00000486429 BTAF1O14981 1849 aa25.07■■□□□ 1.6
CLDN11-206ENST00000486429 NBPF14Q5TI25 921 aa25.06■■□□□ 1.6
CLDN11-206ENST00000486429 MORC1Q86VD1 984 aa25.06■■□□□ 1.6
CLDN11-206ENST00000486429 PKD1L3Q7Z443 1732 aa25.03■■□□□ 1.6
CLDN11-206ENST00000486429 AMER1Q5JTC6 1135 aaPredicted RBP25.02■■□□□ 1.6
CLDN11-206ENST00000486429 PCDH11XQ9BZA7 1347 aa25.02■■□□□ 1.6
CLDN11-206ENST00000486429 PCDH11YQ9BZA8 1340 aa25.02■■□□□ 1.6
CLDN11-206ENST00000486429 SRCAPQ6ZRS2 3230 aa25.02■■□□□ 1.6
CLDN11-206ENST00000486429 EIF4A2Q14240 407 aaKnown RBP25■■□□□ 1.59
CLDN11-206ENST00000486429 EYA1Q99502 592 aa25■■□□□ 1.59
CLDN11-206ENST00000486429 TXNRD1Q16881 649 aa24.99■■□□□ 1.59
CLDN11-206ENST00000486429 KAT6BQ8WYB5 2073 aa24.98■■□□□ 1.59
CLDN11-206ENST00000486429 PROM2Q8N271 834 aa24.98■■□□□ 1.59
CLDN11-206ENST00000486429 SYTL4Q96C24 671 aaPredicted RBP24.97■■□□□ 1.59
CLDN11-206ENST00000486429 ANO8Q9HCE9 1232 aaPredicted RBP24.97■■□□□ 1.59
CLDN11-206ENST00000486429 PER1O15534 1290 aaPredicted RBP24.95■■□□□ 1.58
CLDN11-206ENST00000486429 PAPPAQ13219 1627 aa24.94■■□□□ 1.58
CLDN11-206ENST00000486429 IGSF1Q8N6C5 1336 aa24.94■■□□□ 1.58
CLDN11-206ENST00000486429 PRIM1P49642 420 aaKnown RBP24.94■■□□□ 1.58
CLDN11-206ENST00000486429 SPG7Q9UQ90 795 aa24.93■■□□□ 1.58
CLDN11-206ENST00000486429 PLEKHG2Q9H7P9 1386 aa24.93■■□□□ 1.58
CLDN11-206ENST00000486429 CYP27B1O15528 508 aa24.92■■□□□ 1.58
CLDN11-206ENST00000486429 TOGARAM1Q9Y4F4 1720 aa24.92■■□□□ 1.58
CLDN11-206ENST00000486429 NPC1L1Q9UHC9 1359 aa24.92■■□□□ 1.58
CLDN11-206ENST00000486429 CC2D1BQ5T0F9 858 aaKnown RBP24.91■■□□□ 1.58
CLDN11-206ENST00000486429 STK32BQ9NY57 414 aa24.91■■□□□ 1.58
CLDN11-206ENST00000486429 CASZ1Q86V15 1759 aa24.9■■□□□ 1.58
CLDN11-206ENST00000486429 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.9■■□□□ 1.58
CLDN11-206ENST00000486429 LY75O60449 1722 aa24.89■■□□□ 1.57
CLDN11-206ENST00000486429 SLC15A2Q16348 729 aa24.86■■□□□ 1.57
CLDN11-206ENST00000486429 SLC27A3Q5K4L6 730 aa24.86■■□□□ 1.57
CLDN11-206ENST00000486429 ITGB4P16144 1822 aa24.84■■□□□ 1.57
CLDN11-206ENST00000486429 MTHFSP49914 203 aa24.84■■□□□ 1.57
CLDN11-206ENST00000486429 LRRC4BQ9NT99 713 aa24.84■■□□□ 1.57
CLDN11-206ENST00000486429 NKX1-1Q15270 411 aaPredicted RBP24.83■■□□□ 1.57
CLDN11-206ENST00000486429 IFNL2Q8IZJ0 200 aa24.83■■□□□ 1.57
CLDN11-206ENST00000486429 PHKG2P15735 406 aa24.82■■□□□ 1.56
CLDN11-206ENST00000486429 IL13P35225 146 aa24.82■■□□□ 1.56
CLDN11-206ENST00000486429 CNGB1Q14028 1251 aaPredicted RBP24.82■■□□□ 1.56
CLDN11-206ENST00000486429 AEBP1Q8IUX7 1158 aa24.82■■□□□ 1.56
CLDN11-206ENST00000486429 KDRP35968 1356 aa24.81■■□□□ 1.56
CLDN11-206ENST00000486429 MPRIPQ6WCQ1 1025 aa24.81■■□□□ 1.56
CLDN11-206ENST00000486429 SPON1Q9HCB6 807 aa24.81■■□□□ 1.56
CLDN11-206ENST00000486429 CCNL1Q9UK58 526 aaPredicted RBP24.8■■□□□ 1.56
CLDN11-206ENST00000486429 PALLDQ8WX93 1383 aa24.8■■□□□ 1.56
CLDN11-206ENST00000486429 ZNF827Q17R98 1081 aa24.79■■□□□ 1.56
CLDN11-206ENST00000486429 PLEKHO1Q53GL0 409 aaPredicted RBP24.79■■□□□ 1.56
CLDN11-206ENST00000486429 SULT6B1Q6IMI4 303 aa24.79■■□□□ 1.56
CLDN11-206ENST00000486429 QSER1Q2KHR3 1735 aa24.78■■□□□ 1.56
CLDN11-206ENST00000486429 PDGFDQ9GZP0 370 aaPredicted RBP24.78■■□□□ 1.56
CLDN11-206ENST00000486429 COL3A1P02461 1466 aaPredicted RBP24.77■■□□□ 1.56
CLDN11-206ENST00000486429 AMOTQ4VCS5 1084 aa24.77■■□□□ 1.56
CLDN11-206ENST00000486429 C5P01031 1676 aa24.76■■□□□ 1.55
CLDN11-206ENST00000486429 KCNQ4P56696 695 aa24.76■■□□□ 1.55
CLDN11-206ENST00000486429 ZNF530Q6P9A1 599 aaPredicted RBP24.76■■□□□ 1.55
CLDN11-206ENST00000486429 TMOD3Q9NYL9 352 aa24.76■■□□□ 1.55
CLDN11-206ENST00000486429 DIAPH1O60610 1272 aaKnown RBP24.75■■□□□ 1.55
CLDN11-206ENST00000486429 SMARCC1Q92922 1105 aaPredicted RBP24.75■■□□□ 1.55
CLDN11-206ENST00000486429 AKT1S1Q96B36 256 aa24.75■■□□□ 1.55
CLDN11-206ENST00000486429 TUBGCP6Q96RT7 1819 aa24.75■■□□□ 1.55
CLDN11-206ENST00000486429 ZBTB7AO95365 584 aa24.74■■□□□ 1.55
CLDN11-206ENST00000486429 HSP90AB1P08238 724 aaKnown RBP24.74■■□□□ 1.55
CLDN11-206ENST00000486429 PIGBQ92521 554 aa24.74■■□□□ 1.55
CLDN11-206ENST00000486429 PPP1R1BQ9UD71 204 aaPredicted RBP24.73■■□□□ 1.55
CLDN11-206ENST00000486429 KDM6AO15550 1401 aaPredicted RBP24.72■■□□□ 1.55
CLDN11-206ENST00000486429 C1orf141Q5JVX7 400 aa24.72■■□□□ 1.55
CLDN11-206ENST00000486429 DCAF5Q96JK2 942 aa24.71■■□□□ 1.55
CLDN11-206ENST00000486429 TAF1LQ8IZX4 1826 aa24.7■■□□□ 1.55
CLDN11-206ENST00000486429 HMOX1P09601 288 aa24.7■■□□□ 1.54
CLDN11-206ENST00000486429 MTFR1LQ9H019 292 aa24.7■■□□□ 1.54
CLDN11-206ENST00000486429 TFCP2L1Q9NZI6 479 aa24.69■■□□□ 1.54
CLDN11-206ENST00000486429 PNPLA7Q6ZV29 1317 aa24.68■■□□□ 1.54
CLDN11-206ENST00000486429 HMGB2P26583 209 aaKnown RBP24.68■■□□□ 1.54
CLDN11-206ENST00000486429 ERVV-2B6SEH9 535 aa24.67■■□□□ 1.54
CLDN11-206ENST00000486429 CFAP53Q96M91 514 aa24.67■■□□□ 1.54
CLDN11-206ENST00000486429 ATF5Q9Y2D1 282 aaPredicted RBP24.67■■□□□ 1.54
CLDN11-206ENST00000486429 C4BP0C0L5 1744 aa24.66■■□□□ 1.54
CLDN11-206ENST00000486429 U2SURPO15042 1029 aaKnown RBP24.65■■□□□ 1.54
CLDN11-206ENST00000486429 PTGER2P43116 358 aa24.65■■□□□ 1.54
CLDN11-206ENST00000486429 ASAP1Q9ULH1 1129 aa24.65■■□□□ 1.54
CLDN11-206ENST00000486429 LOC102724428A0A0B4J2F2 783 aa24.64■■□□□ 1.54
CLDN11-206ENST00000486429 PPP2R1AP30153 589 aa24.64■■□□□ 1.54
CLDN11-206ENST00000486429 SIK1P57059 783 aa24.64■■□□□ 1.54
CLDN11-206ENST00000486429 SCN11AQ9UI33 1791 aa24.64■■□□□ 1.53
CLDN11-206ENST00000486429 SLC16A10Q8TF71 515 aa24.63■■□□□ 1.53
CLDN11-206ENST00000486429 ATG3Q9NT62 314 aa24.63■■□□□ 1.53
CLDN11-206ENST00000486429 CABP4P57796 275 aa24.62■■□□□ 1.53
CLDN11-206ENST00000486429 AKAP4Q5JQC9 854 aa24.62■■□□□ 1.53
CLDN11-206ENST00000486429 ZNF831Q5JPB2 1677 aa24.6■■□□□ 1.53
CLDN11-206ENST00000486429 AK7Q96M32 723 aa24.6■■□□□ 1.53
CLDN11-206ENST00000486429 SGIP1Q9BQI5 828 aa24.6■■□□□ 1.53
CLDN11-206ENST00000486429 MRC1P22897 1456 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms